Wall clock time and date at job start Sun Mar 7 2021 02:32:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.45198 * 109.47210 * 2 1 4 4 C 1.34228 * 117.00171 * 180.02562 * 3 2 1 5 5 O 1.20830 * 119.99496 * 359.97438 * 4 3 2 6 6 C 1.50696 * 120.00409 * 180.02562 * 4 3 2 7 7 H 1.09000 * 109.46647 * 299.99509 * 6 4 3 8 8 C 1.53002 * 109.47306 * 59.99165 * 6 4 3 9 9 C 1.52996 * 109.46972 * 180.02562 * 8 6 4 10 10 C 1.52997 * 109.47165 * 300.00293 * 9 8 6 11 11 H 1.09000 * 109.47140 * 299.99954 * 10 9 8 12 12 N 1.46506 * 109.47277 * 180.02562 * 10 9 8 13 13 C 1.34780 * 120.00088 * 84.99368 * 12 10 9 14 14 O 1.21644 * 119.99713 * 0.02562 * 13 12 10 15 15 C 1.47186 * 119.99956 * 180.02562 * 13 12 10 16 16 C 1.36006 * 123.46055 * 0.02877 * 15 13 12 17 17 S 1.70457 * 110.81382 * 179.97438 * 16 15 13 18 18 C 1.75508 * 92.44634 * 0.02562 * 17 16 15 19 19 C 1.50699 * 124.71126 * 179.97438 * 18 17 16 20 20 O 1.42899 * 109.46825 * 245.02079 * 19 18 17 21 21 Si 1.86301 * 109.47142 * 5.02032 * 19 18 17 22 22 C 1.32775 * 110.57313 * 359.73165 * 18 17 16 23 23 C 1.52999 * 109.47592 * 60.00300 * 10 9 8 24 24 C 1.52997 * 109.47238 * 179.97438 * 6 4 3 25 25 H 1.08999 * 109.47381 * 180.02562 * 1 2 3 26 26 H 1.09002 * 109.47207 * 300.00047 * 1 2 3 27 27 H 1.08999 * 109.47067 * 59.99970 * 1 2 3 28 28 H 1.09005 * 109.46935 * 239.99510 * 2 1 3 29 29 H 1.08999 * 109.47067 * 120.00030 * 2 1 3 30 30 H 1.08992 * 109.46974 * 300.00616 * 8 6 4 31 31 H 1.08996 * 109.46550 * 60.00722 * 8 6 4 32 32 H 1.09000 * 109.47054 * 60.00300 * 9 8 6 33 33 H 1.09001 * 109.46997 * 180.02562 * 9 8 6 34 34 H 0.97000 * 120.00161 * 265.00272 * 12 10 9 35 35 H 1.07995 * 124.59505 * 359.97288 * 16 15 13 36 36 H 1.08994 * 109.47003 * 125.02322 * 19 18 17 37 37 H 0.96699 * 114.00450 * 59.99868 * 20 19 18 38 38 H 1.48495 * 109.99900 * 180.02562 * 21 19 18 39 39 H 1.48498 * 109.99731 * 301.32132 * 21 19 18 40 40 H 1.07996 * 123.45519 * 180.22934 * 22 18 17 41 41 H 1.08993 * 109.47839 * 180.02562 * 23 10 9 42 42 H 1.09000 * 109.47160 * 59.99666 * 23 10 9 43 43 H 1.09001 * 109.46922 * 59.99800 * 24 6 4 44 44 H 1.09000 * 109.47140 * 299.99500 * 24 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3447 1.5448 -0.0005 5 8 4.0807 0.5865 -0.0005 6 6 3.9208 2.9373 0.0000 7 1 3.5844 3.4699 -0.8896 8 6 3.4497 3.6837 1.2498 9 6 4.0341 5.0976 1.2500 10 6 5.5620 5.0180 1.2490 11 1 5.8986 4.4856 2.1386 12 7 6.1216 6.3720 1.2498 13 6 6.2856 7.0327 2.4130 14 8 5.9694 6.5047 3.4622 15 6 6.8473 8.3932 2.4137 16 6 7.2235 9.0497 1.2835 17 16 7.8280 10.5994 1.6561 18 6 7.5727 10.3677 3.3770 19 6 7.8958 11.3884 4.4375 20 8 8.9374 10.8882 5.2783 21 14 8.4568 12.9694 3.6274 22 6 7.0506 9.1701 3.6141 23 6 6.0331 4.2717 -0.0008 24 6 5.4486 2.8572 -0.0001 25 1 -0.3634 -1.0276 0.0005 26 1 -0.3634 0.5138 0.8900 27 1 -0.3633 0.5138 -0.8900 28 1 1.8933 -0.5139 -0.8900 29 1 1.8933 -0.5138 0.8900 30 1 2.3613 3.7407 1.2503 31 1 3.7861 3.1511 2.1393 32 1 3.6974 5.6300 0.3604 33 1 3.6989 5.6292 2.1406 34 1 6.3740 6.7930 0.4131 35 1 7.1494 8.6442 0.2854 36 1 7.0067 11.5830 5.0373 37 1 9.7608 10.6925 4.8104 38 1 8.7791 13.9840 4.6627 39 1 9.6496 12.7111 2.7814 40 1 6.8061 8.8125 4.6034 41 1 7.1215 4.2146 -0.0013 42 1 5.6964 4.8041 -0.8904 43 1 5.7845 2.3254 -0.8904 44 1 5.7846 2.3247 0.8897 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14589458_6894386.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:32:42 Heat of formation + Delta-G solvation = -135.797995 kcal Electronic energy + Delta-G solvation = -26708.575307 eV Core-core repulsion = 22718.518336 eV Total energy + Delta-G solvation = -3990.056971 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.122 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -41.78597 -41.05944 -39.41043 -38.65638 -37.53687 -37.12186 -35.34187 -32.82924 -32.13535 -31.92751 -30.60948 -26.99786 -26.27617 -24.90033 -23.92619 -23.58908 -22.15469 -21.75855 -21.12020 -20.30399 -19.08808 -18.62812 -18.07579 -17.88759 -17.55534 -17.47703 -16.92416 -16.44678 -16.11321 -15.82074 -15.54926 -15.32891 -15.13797 -14.89508 -14.53566 -14.50366 -14.13941 -14.06242 -13.90987 -13.70418 -13.59796 -13.47641 -13.30808 -12.91369 -12.81656 -12.67734 -12.51919 -12.43776 -12.40900 -12.30500 -11.83524 -11.69044 -11.49166 -11.45940 -11.24831 -10.90335 -10.73117 -10.15552 -10.03483 -9.54232 -5.13956 -0.39514 0.30788 0.65313 0.88777 1.15198 1.23644 1.47877 1.65897 1.84286 2.07000 2.35741 3.22319 3.42800 3.45820 3.52168 3.58159 3.80382 3.82976 3.94692 3.96685 3.99240 4.00857 4.11346 4.18447 4.23895 4.27333 4.30219 4.32079 4.43434 4.53919 4.63169 4.68213 4.74061 4.80990 4.86508 4.90681 4.99582 5.00869 5.02905 5.05274 5.14823 5.20039 5.21836 5.43599 5.51436 6.27322 6.43586 6.78909 7.20629 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.357 6.357 4 C 0.465 3.535 5 O -0.506 6.506 6 C -0.081 4.081 7 H 0.111 0.889 8 C -0.108 4.108 9 C -0.127 4.127 10 C 0.143 3.857 11 H 0.093 0.907 12 N -0.723 5.723 13 C 0.579 3.421 14 O -0.530 6.530 15 C -0.155 4.155 16 C -0.206 4.206 17 S 0.197 5.803 18 C -0.242 4.242 19 C -0.033 4.033 20 O -0.522 6.522 21 Si 0.649 3.351 22 C -0.053 4.053 23 C -0.125 4.125 24 C -0.101 4.101 25 H 0.081 0.919 26 H 0.067 0.933 27 H 0.067 0.933 28 H 0.070 0.930 29 H 0.070 0.930 30 H 0.083 0.917 31 H 0.072 0.928 32 H 0.070 0.930 33 H 0.077 0.923 34 H 0.398 0.602 35 H 0.171 0.829 36 H 0.128 0.872 37 H 0.378 0.622 38 H -0.234 1.234 39 H -0.239 1.239 40 H 0.156 0.844 41 H 0.078 0.922 42 H 0.073 0.927 43 H 0.080 0.920 44 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.769 3.613 -5.776 7.039 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.274 6.274 4 C 0.308 3.692 5 O -0.393 6.393 6 C -0.100 4.100 7 H 0.129 0.871 8 C -0.146 4.146 9 C -0.166 4.166 10 C 0.038 3.962 11 H 0.111 0.889 12 N -0.374 5.374 13 C 0.364 3.636 14 O -0.407 6.407 15 C -0.173 4.173 16 C -0.345 4.345 17 S 0.463 5.537 18 C -0.358 4.358 19 C -0.145 4.145 20 O -0.329 6.329 21 Si 0.548 3.452 22 C -0.082 4.082 23 C -0.163 4.163 24 C -0.139 4.139 25 H 0.100 0.900 26 H 0.086 0.914 27 H 0.086 0.914 28 H 0.089 0.911 29 H 0.089 0.911 30 H 0.101 0.899 31 H 0.091 0.909 32 H 0.089 0.911 33 H 0.096 0.904 34 H 0.233 0.767 35 H 0.189 0.811 36 H 0.146 0.854 37 H 0.225 0.775 38 H -0.157 1.157 39 H -0.163 1.163 40 H 0.174 0.826 41 H 0.097 0.903 42 H 0.091 0.909 43 H 0.098 0.902 44 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges -1.028 4.756 -5.516 7.356 hybrid contribution 0.329 -2.096 0.473 2.174 sum -0.699 2.660 -5.043 5.744 Atomic orbital electron populations 1.21819 0.92341 1.03249 1.03649 1.23076 0.95591 0.79903 1.02723 1.86504 1.24431 1.32696 1.83775 1.23737 0.80685 0.92612 0.72192 1.90689 1.60472 1.43156 1.45014 1.21175 0.96675 0.89839 1.02276 0.87085 1.21494 1.01781 0.95283 0.96068 1.21923 0.94697 0.96574 1.03397 1.21079 0.93202 0.82024 0.99845 0.88884 1.45899 1.65568 1.17134 1.08842 1.17616 0.77663 0.84530 0.83756 1.90832 1.50273 1.68367 1.31217 1.20268 1.07817 0.96386 0.92868 1.25794 1.04931 1.00975 1.02751 1.83170 1.59029 1.11875 0.99627 1.24744 1.11441 1.01425 0.98213 1.24408 0.94796 1.01570 0.93758 1.86649 1.24293 1.85506 1.36439 0.95273 0.87811 0.78089 0.84031 1.21068 0.96470 0.91704 0.98947 1.21826 1.01557 0.95556 0.97384 1.21401 0.91568 0.96415 1.04502 0.90032 0.91351 0.91385 0.91144 0.91114 0.89883 0.90881 0.91148 0.90448 0.76687 0.81139 0.85429 0.77454 1.15688 1.16258 0.82603 0.90333 0.90852 0.90158 0.90366 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.22 10.29 37.16 0.38 0.61 16 2 C 0.06 0.03 6.19 37.16 0.23 0.26 16 3 O -0.36 -0.61 10.12 -39.25 -0.40 -1.00 16 4 C 0.47 0.94 7.26 36.00 0.26 1.20 16 5 O -0.51 -2.51 15.73 -18.75 -0.30 -2.81 16 6 C -0.08 0.08 2.63 -91.77 -0.24 -0.16 16 7 H 0.11 -0.29 8.14 -51.93 -0.42 -0.71 16 8 C -0.11 0.11 5.13 -26.73 -0.14 -0.02 16 9 C -0.13 0.15 5.49 -26.73 -0.15 0.00 16 10 C 0.14 -0.13 2.45 -67.93 -0.17 -0.30 16 11 H 0.09 0.13 7.57 -51.93 -0.39 -0.27 16 12 N -0.72 0.80 5.05 -54.95 -0.28 0.52 16 13 C 0.58 1.24 7.76 -12.63 -0.10 1.14 16 14 O -0.53 -3.26 16.46 5.24 0.09 -3.17 16 15 C -0.16 -0.11 5.98 -104.63 -0.63 -0.74 16 16 C -0.21 0.40 10.38 29.93 0.31 0.71 16 17 S 0.20 -0.41 20.20 -107.50 -2.17 -2.58 16 18 C -0.24 0.09 5.65 -36.18 -0.20 -0.12 16 19 C -0.03 0.02 2.94 36.01 0.11 0.13 16 20 O -0.52 -0.47 12.88 -35.23 -0.45 -0.92 16 21 Si 0.65 -1.09 30.92 -169.99 -5.26 -6.34 16 22 C -0.05 -0.07 9.95 -39.02 -0.39 -0.46 16 23 C -0.13 0.34 5.40 -26.70 -0.14 0.19 16 24 C -0.10 0.11 4.50 -26.71 -0.12 -0.01 16 25 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 26 H 0.07 -0.09 8.14 -51.93 -0.42 -0.52 16 27 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 28 H 0.07 0.03 8.13 -51.93 -0.42 -0.39 16 29 H 0.07 0.05 8.13 -51.93 -0.42 -0.38 16 30 H 0.08 -0.10 8.11 -51.93 -0.42 -0.52 16 31 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 32 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 33 H 0.08 0.06 8.14 -51.93 -0.42 -0.36 16 34 H 0.40 -1.57 7.10 -40.82 -0.29 -1.86 16 35 H 0.17 -0.85 7.01 -52.49 -0.37 -1.22 16 36 H 0.13 -0.18 7.96 -51.93 -0.41 -0.60 16 37 H 0.38 -0.78 8.70 45.56 0.40 -0.38 16 38 H -0.23 -0.30 7.11 56.52 0.40 0.11 16 39 H -0.24 0.06 7.11 56.52 0.40 0.46 16 40 H 0.16 0.37 8.06 -52.49 -0.42 -0.05 16 41 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 42 H 0.07 -0.30 8.14 -51.93 -0.42 -0.72 16 43 H 0.08 -0.06 8.10 -51.93 -0.42 -0.48 16 44 H 0.08 0.02 8.10 -51.93 -0.42 -0.40 16 LS Contribution 377.83 15.07 5.69 5.69 Total: 0.00 -8.62 377.83 -10.65 -19.27 By element: Atomic # 1 Polarization: -4.50 SS G_CDS: -6.60 Total: -11.10 kcal Atomic # 6 Polarization: 3.43 SS G_CDS: -0.98 Total: 2.44 kcal Atomic # 7 Polarization: 0.80 SS G_CDS: -0.28 Total: 0.52 kcal Atomic # 8 Polarization: -6.85 SS G_CDS: -1.06 Total: -7.91 kcal Atomic # 14 Polarization: -1.09 SS G_CDS: -5.26 Total: -6.34 kcal Atomic # 16 Polarization: -0.41 SS G_CDS: -2.17 Total: -2.58 kcal Total LS contribution 5.69 Total: 5.69 kcal Total: -8.62 -10.65 -19.27 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589458_6894386.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -116.525 kcal (2) G-P(sol) polarization free energy of solvation -8.619 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -125.144 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.654 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.273 kcal (6) G-S(sol) free energy of system = (1) + (5) -135.798 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds