Wall clock time and date at job start Sun Mar 7 2021 02:32:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 O 1.45198 * 109.47105 * 2 1 4 4 C 1.34233 * 117.00013 * 179.97438 * 3 2 1 5 5 O 1.20825 * 119.99730 * 0.02562 * 4 3 2 6 6 C 1.50700 * 119.99839 * 180.02562 * 4 3 2 7 7 H 1.09001 * 109.47108 * 60.00279 * 6 4 3 8 8 C 1.52999 * 109.46753 * 180.02562 * 6 4 3 9 9 C 1.52997 * 109.47233 * 179.97438 * 8 6 4 10 10 C 1.53001 * 109.47118 * 300.00278 * 9 8 6 11 11 H 1.09004 * 109.46612 * 299.99289 * 10 9 8 12 12 N 1.46504 * 109.47420 * 179.97438 * 10 9 8 13 13 C 1.34770 * 120.00003 * 154.99688 * 12 10 9 14 14 O 1.21277 * 120.00504 * 359.97438 * 13 12 10 15 15 C 1.50699 * 119.99634 * 180.02562 * 13 12 10 16 16 N 1.46501 * 109.46876 * 179.97438 * 15 13 12 17 17 C 1.36843 * 125.06155 * 264.96925 * 16 15 13 18 18 C 1.34233 * 109.93746 * 180.02562 * 17 16 15 19 19 C 1.50701 * 126.50253 * 179.97438 * 18 17 16 20 20 O 1.42901 * 109.47328 * 105.01940 * 19 18 17 21 21 Si 1.86305 * 109.46539 * 345.02178 * 19 18 17 22 22 C 1.46494 * 107.00095 * 359.97438 * 18 17 16 23 23 C 1.39592 * 134.03564 * 180.02562 * 22 18 17 24 24 C 1.36662 * 119.76435 * 180.25940 * 23 22 18 25 25 C 1.38796 * 120.52606 * 359.48003 * 24 23 22 26 26 C 1.37793 * 120.66403 * 0.50095 * 25 24 23 27 27 C 1.37694 * 125.06664 * 85.00122 * 16 15 13 28 28 C 1.52998 * 109.47579 * 59.99286 * 10 9 8 29 29 C 1.52997 * 109.47113 * 300.00579 * 28 10 9 30 30 H 1.09003 * 109.47248 * 60.00110 * 1 2 3 31 31 H 1.09007 * 109.47120 * 179.97438 * 1 2 3 32 32 H 1.09000 * 109.47327 * 299.99864 * 1 2 3 33 33 H 1.09006 * 109.47042 * 239.99801 * 2 1 3 34 34 H 1.09003 * 109.47065 * 120.00412 * 2 1 3 35 35 H 1.08997 * 109.47638 * 59.99578 * 8 6 4 36 36 H 1.09010 * 109.47104 * 299.99565 * 8 6 4 37 37 H 1.08998 * 109.47635 * 179.97438 * 9 8 6 38 38 H 1.09010 * 109.47210 * 59.99523 * 9 8 6 39 39 H 0.97002 * 119.99635 * 334.99518 * 12 10 9 40 40 H 1.08997 * 109.47581 * 60.00016 * 15 13 12 41 41 H 1.09000 * 109.47564 * 299.99656 * 15 13 12 42 42 H 1.08000 * 125.02789 * 359.97438 * 17 16 15 43 43 H 1.09002 * 109.47056 * 225.02715 * 19 18 17 44 44 H 0.96695 * 113.99853 * 300.00331 * 20 19 18 45 45 H 1.48504 * 110.00121 * 58.68373 * 21 19 18 46 46 H 1.48503 * 109.99623 * 179.97438 * 21 19 18 47 47 H 1.08002 * 120.11469 * 359.97438 * 23 22 18 48 48 H 1.07993 * 119.73486 * 179.70200 * 24 23 22 49 49 H 1.07993 * 119.66604 * 180.27103 * 25 24 23 50 50 H 1.08002 * 120.10512 * 179.78538 * 26 25 24 51 51 H 1.09001 * 109.46692 * 60.00101 * 28 10 9 52 52 H 1.08997 * 109.47154 * 180.02562 * 28 10 9 53 53 H 1.08994 * 109.47276 * 299.99517 * 29 28 10 54 54 H 1.08998 * 109.47269 * 179.97438 * 29 28 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3448 1.5448 0.0005 5 8 4.0807 0.5866 0.0005 6 6 3.9207 2.9374 0.0012 7 1 3.5845 3.4693 0.8912 8 6 5.4486 2.8573 0.0010 9 6 6.0335 4.2711 0.0010 10 6 5.5618 5.0181 -1.2481 11 1 5.8978 4.4859 -2.1382 12 7 6.1213 6.3721 -1.2479 13 6 6.2848 7.0338 -2.4105 14 8 5.9692 6.5084 -3.4570 15 6 6.8609 8.4264 -2.4102 16 7 6.9368 8.9237 -3.7862 17 6 8.0427 8.8501 -4.5888 18 6 7.7769 9.3969 -5.7855 19 6 8.7280 9.5143 -6.9486 20 8 8.3831 8.5500 -7.9452 21 14 10.4686 9.2046 -6.3609 22 6 6.3870 9.8579 -5.7466 23 6 5.5495 10.4938 -6.6648 24 6 4.2666 10.8045 -6.3109 25 6 3.7858 10.4832 -5.0492 26 6 4.5952 9.8551 -4.1277 27 6 5.9062 9.5353 -4.4643 28 6 4.0339 5.0981 -1.2482 29 6 3.4491 3.6843 -1.2481 30 1 -0.3634 0.5138 -0.8900 31 1 -0.3634 -1.0277 -0.0005 32 1 -0.3634 0.5138 0.8900 33 1 1.8934 -0.5139 -0.8900 34 1 1.8933 -0.5139 0.8900 35 1 5.7846 2.3255 -0.8891 36 1 5.7846 2.3248 0.8909 37 1 7.1220 4.2141 0.0014 38 1 5.6975 4.8033 0.8911 39 1 6.3740 6.7922 -0.4109 40 1 7.8604 8.4061 -1.9760 41 1 6.2219 9.0839 -1.8207 42 1 8.9894 8.4170 -4.3015 43 1 8.6607 10.5159 -7.3733 44 1 8.4214 7.6344 -7.6365 45 1 10.5660 7.8542 -5.7508 46 1 11.4163 9.3168 -7.4987 47 1 5.9157 10.7436 -7.6497 48 1 3.6207 11.3008 -7.0200 49 1 2.7683 10.7312 -4.7858 50 1 4.2127 9.6123 -3.1473 51 1 3.6980 5.6303 -0.3581 52 1 3.6980 5.6299 -2.1383 53 1 3.7850 3.1522 -2.1381 54 1 2.3607 3.7413 -1.2477 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14589458_9818708.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:32:56 Heat of formation + Delta-G solvation = -94.331615 kcal Electronic energy + Delta-G solvation = -35931.718073 eV Core-core repulsion = 31221.353543 eV Total energy + Delta-G solvation = -4710.364530 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 387.192 amu Computer time = 1.15 seconds Orbital eigenvalues (eV) -42.52899 -41.89426 -40.88429 -39.13509 -38.14960 -37.79052 -37.61310 -35.40738 -34.09669 -32.80062 -31.87551 -31.72925 -30.83326 -30.22677 -28.75186 -26.07241 -25.23269 -23.92014 -23.83852 -23.57153 -22.69179 -21.99015 -21.60757 -20.92994 -20.62137 -18.84234 -18.67361 -18.38006 -17.85282 -17.70355 -17.62196 -17.39205 -16.85736 -16.40504 -16.37401 -16.09118 -15.79103 -15.51413 -15.35953 -15.24230 -14.95673 -14.81366 -14.70284 -14.58174 -14.45293 -14.12779 -14.08681 -13.87240 -13.63245 -13.51455 -13.33341 -13.12390 -12.98009 -12.81476 -12.71714 -12.56827 -12.55113 -12.43236 -12.37613 -12.22974 -12.00117 -11.73878 -11.66188 -11.57469 -11.49873 -11.39655 -11.07470 -10.53619 -10.45839 -10.13966 -9.14688 -8.62150 -4.90067 0.15376 0.65212 1.05312 1.34732 1.43045 1.48724 1.59810 1.61243 1.71822 1.99635 2.21744 2.96082 3.41422 3.49249 3.51304 3.58095 3.66283 3.70002 3.77045 3.86021 3.88769 3.93470 3.99721 4.03716 4.07276 4.13356 4.18850 4.23274 4.25960 4.28194 4.28852 4.31988 4.38907 4.50478 4.59069 4.59820 4.72378 4.72826 4.79360 4.80162 4.85262 4.89240 4.91344 5.00916 5.04329 5.06313 5.11695 5.14950 5.21405 5.25654 5.39721 5.46081 5.52122 5.67677 5.74911 5.76375 6.20252 6.25226 6.50931 6.53958 6.61461 7.18336 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.053 3.947 3 O -0.360 6.360 4 C 0.462 3.538 5 O -0.542 6.542 6 C -0.073 4.073 7 H 0.140 0.860 8 C -0.100 4.100 9 C -0.112 4.112 10 C 0.144 3.856 11 H 0.057 0.943 12 N -0.706 5.706 13 C 0.490 3.510 14 O -0.574 6.574 15 C 0.087 3.913 16 N -0.465 5.465 17 C 0.075 3.925 18 C -0.217 4.217 19 C -0.056 4.056 20 O -0.556 6.556 21 Si 0.787 3.213 22 C -0.116 4.116 23 C -0.089 4.089 24 C -0.154 4.154 25 C -0.108 4.108 26 C -0.132 4.132 27 C 0.092 3.908 28 C -0.118 4.118 29 C -0.104 4.104 30 H 0.067 0.933 31 H 0.095 0.905 32 H 0.071 0.929 33 H 0.063 0.937 34 H 0.069 0.931 35 H 0.053 0.947 36 H 0.080 0.920 37 H 0.085 0.915 38 H 0.103 0.897 39 H 0.423 0.577 40 H 0.165 0.835 41 H 0.147 0.853 42 H 0.196 0.804 43 H 0.110 0.890 44 H 0.381 0.619 45 H -0.274 1.274 46 H -0.304 1.304 47 H 0.117 0.883 48 H 0.135 0.865 49 H 0.145 0.855 50 H 0.135 0.865 51 H 0.095 0.905 52 H 0.051 0.949 53 H 0.050 0.950 54 H 0.085 0.915 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.027 3.852 11.036 11.689 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.020 4.020 3 O -0.277 6.277 4 C 0.306 3.694 5 O -0.431 6.431 6 C -0.092 4.092 7 H 0.158 0.842 8 C -0.139 4.139 9 C -0.149 4.149 10 C 0.039 3.961 11 H 0.075 0.925 12 N -0.359 5.359 13 C 0.276 3.724 14 O -0.452 6.452 15 C -0.037 4.037 16 N -0.148 5.148 17 C -0.051 4.051 18 C -0.224 4.224 19 C -0.164 4.164 20 O -0.364 6.364 21 Si 0.691 3.309 22 C -0.120 4.120 23 C -0.108 4.108 24 C -0.173 4.173 25 C -0.127 4.127 26 C -0.153 4.153 27 C -0.013 4.013 28 C -0.156 4.156 29 C -0.142 4.142 30 H 0.086 0.914 31 H 0.114 0.886 32 H 0.090 0.910 33 H 0.082 0.918 34 H 0.088 0.912 35 H 0.072 0.928 36 H 0.099 0.901 37 H 0.104 0.896 38 H 0.121 0.879 39 H 0.261 0.739 40 H 0.182 0.818 41 H 0.165 0.835 42 H 0.213 0.787 43 H 0.128 0.872 44 H 0.229 0.771 45 H -0.201 1.201 46 H -0.232 1.232 47 H 0.135 0.865 48 H 0.153 0.847 49 H 0.163 0.837 50 H 0.152 0.848 51 H 0.114 0.886 52 H 0.069 0.931 53 H 0.069 0.931 54 H 0.103 0.897 Dipole moment (debyes) X Y Z Total from point charges 0.562 3.086 10.199 10.670 hybrid contribution -0.723 -1.530 -0.770 1.859 sum -0.161 1.556 9.429 9.558 Atomic orbital electron populations 1.21824 0.90642 1.04260 1.03766 1.23239 0.96964 0.79459 1.02351 1.86516 1.24366 1.33352 1.83461 1.24404 0.80536 0.93462 0.70973 1.90670 1.61143 1.44542 1.46786 1.21265 0.96659 0.88123 1.03135 0.84217 1.21375 0.91460 0.97668 1.03364 1.21735 1.01826 0.94021 0.97357 1.20953 0.93148 0.82581 0.99382 0.92470 1.45836 1.64316 1.16485 1.09247 1.21499 0.78181 0.88861 0.83897 1.90809 1.51409 1.69606 1.33381 1.22023 1.07955 0.92078 0.81685 1.43432 1.09285 1.49546 1.12491 1.22001 0.92237 1.00694 0.90172 1.20701 0.94673 1.10335 0.96706 1.24721 1.07674 0.95333 0.88710 1.86552 1.90905 1.19602 1.39319 0.94207 0.71069 0.83417 0.82252 1.19338 0.94789 1.03784 0.94131 1.20446 0.93837 0.97950 0.98520 1.20915 0.95781 1.02912 0.97719 1.21133 1.00224 0.98168 0.93145 1.20249 0.90543 1.03206 1.01274 1.18392 0.90973 0.99582 0.92337 1.21821 0.94683 0.95946 1.03198 1.21425 1.01921 0.95505 0.95348 0.91419 0.88613 0.90989 0.91842 0.91248 0.92786 0.90138 0.89597 0.87853 0.73900 0.81794 0.83535 0.78719 0.87238 0.77068 1.20052 1.23241 0.86459 0.84688 0.83689 0.84756 0.88634 0.93057 0.93069 0.89668 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.47 10.29 71.98 0.74 1.21 16 2 C 0.05 0.08 6.19 71.98 0.45 0.53 16 3 O -0.36 -1.30 10.12 -51.45 -0.52 -1.82 16 4 C 0.46 2.01 7.25 71.24 0.52 2.53 16 5 O -0.54 -5.97 15.73 21.97 0.35 -5.63 16 6 C -0.07 0.22 2.63 -11.54 -0.03 0.19 16 7 H 0.14 -1.18 8.14 -2.39 -0.02 -1.20 16 8 C -0.10 0.34 4.49 30.59 0.14 0.48 16 9 C -0.11 1.01 5.39 30.59 0.16 1.18 16 10 C 0.14 -0.68 2.45 44.99 0.11 -0.57 16 11 H 0.06 0.16 7.58 -2.38 -0.02 0.14 16 12 N -0.71 6.07 5.08 -442.53 -2.25 3.83 16 13 C 0.49 -0.99 7.86 87.66 0.69 -0.30 16 14 O -0.57 -6.02 16.08 -3.02 -0.05 -6.07 16 15 C 0.09 -0.72 6.48 85.63 0.56 -0.17 16 16 N -0.47 -0.49 2.27 -519.99 -1.18 -1.67 16 17 C 0.07 0.09 9.89 83.00 0.82 0.91 16 18 C -0.22 -1.24 5.58 -18.63 -0.10 -1.34 16 19 C -0.06 -0.24 3.06 71.24 0.22 -0.03 16 20 O -0.56 -4.99 12.88 -148.98 -1.92 -6.90 16 21 Si 0.79 -0.68 30.82 68.60 2.11 1.43 16 22 C -0.12 -1.13 6.35 -20.20 -0.13 -1.26 16 23 C -0.09 -0.85 10.05 22.23 0.22 -0.63 16 24 C -0.15 -1.01 9.97 22.03 0.22 -0.79 16 25 C -0.11 -0.48 10.01 22.30 0.22 -0.26 16 26 C -0.13 -0.60 10.00 22.37 0.22 -0.37 16 27 C 0.09 0.62 6.80 39.03 0.27 0.88 16 28 C -0.12 0.50 5.49 30.59 0.17 0.67 16 29 C -0.10 0.24 5.13 30.59 0.16 0.39 16 30 H 0.07 -0.19 8.14 -2.39 -0.02 -0.21 16 31 H 0.10 -0.57 8.14 -2.38 -0.02 -0.59 16 32 H 0.07 -0.27 8.14 -2.39 -0.02 -0.29 16 33 H 0.06 0.17 8.13 -2.38 -0.02 0.15 16 34 H 0.07 0.11 8.13 -2.39 -0.02 0.09 16 35 H 0.05 0.08 8.10 -2.39 -0.02 0.06 16 36 H 0.08 -0.23 8.10 -2.38 -0.02 -0.25 16 37 H 0.09 -0.83 8.14 -2.39 -0.02 -0.85 16 38 H 0.10 -1.46 8.14 -2.38 -0.02 -1.48 16 39 H 0.42 -7.07 8.60 -92.71 -0.80 -7.87 16 40 H 0.16 -2.72 8.12 -2.39 -0.02 -2.74 16 41 H 0.15 -2.02 8.14 -2.39 -0.02 -2.04 16 42 H 0.20 -1.07 6.27 -2.91 -0.02 -1.09 16 43 H 0.11 0.43 7.96 -2.39 -0.02 0.42 16 44 H 0.38 1.57 8.70 -74.06 -0.64 0.93 16 45 H -0.27 -0.35 7.00 99.48 0.70 0.35 16 46 H -0.30 -2.14 7.11 99.48 0.71 -1.43 16 47 H 0.12 1.03 8.06 -2.91 -0.02 1.00 16 48 H 0.14 0.34 8.06 -2.91 -0.02 0.32 16 49 H 0.15 -0.10 8.06 -2.91 -0.02 -0.13 16 50 H 0.13 -0.09 8.06 -2.91 -0.02 -0.12 16 51 H 0.10 -0.85 8.14 -2.39 -0.02 -0.87 16 52 H 0.05 0.08 8.14 -2.39 -0.02 0.06 16 53 H 0.05 0.10 8.14 -2.39 -0.02 0.08 16 54 H 0.08 -0.22 8.11 -2.39 -0.02 -0.24 16 Total: 0.00 -33.03 443.93 1.66 -31.36 By element: Atomic # 1 Polarization: -17.30 SS G_CDS: -0.50 Total: -17.80 kcal Atomic # 6 Polarization: -2.35 SS G_CDS: 5.62 Total: 3.27 kcal Atomic # 7 Polarization: 5.58 SS G_CDS: -3.43 Total: 2.16 kcal Atomic # 8 Polarization: -18.28 SS G_CDS: -2.14 Total: -20.42 kcal Atomic # 14 Polarization: -0.68 SS G_CDS: 2.11 Total: 1.43 kcal Total: -33.03 1.66 -31.36 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589458_9818708.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -62.969 kcal (2) G-P(sol) polarization free energy of solvation -33.026 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -95.996 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.664 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.362 kcal (6) G-S(sol) free energy of system = (1) + (5) -94.332 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.15 seconds