Wall clock time and date at job start Sun Mar 7 2021 02:33:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 O 1.45202 * 109.46867 * 2 1 4 4 C 1.34232 * 116.99450 * 179.97438 * 3 2 1 5 5 O 1.20825 * 120.00145 * 359.97438 * 4 3 2 6 6 C 1.50701 * 119.99784 * 179.97438 * 4 3 2 7 7 H 1.09003 * 109.47248 * 59.99924 * 6 4 3 8 8 C 1.52994 * 109.47298 * 180.02562 * 6 4 3 9 9 C 1.52996 * 109.47595 * 180.02562 * 8 6 4 10 10 C 1.53008 * 109.46934 * 300.00158 * 9 8 6 11 11 H 1.09003 * 109.46781 * 299.99784 * 10 9 8 12 12 N 1.46495 * 109.46869 * 179.97438 * 10 9 8 13 13 C 1.34778 * 119.99912 * 154.99842 * 12 10 9 14 14 O 1.21626 * 120.00023 * 359.97438 * 13 12 10 15 15 C 1.47257 * 120.00347 * 179.97438 * 13 12 10 16 16 C 1.36773 * 126.94306 * 179.97438 * 15 13 12 17 17 C 1.50697 * 125.80247 * 359.97438 * 16 15 13 18 18 N 1.34664 * 108.39545 * 180.02562 * 16 15 13 19 19 C 1.36448 * 110.30053 * 359.97438 * 18 16 15 20 20 C 1.50695 * 125.57327 * 180.02562 * 19 18 16 21 21 O 1.42905 * 109.47205 * 119.97808 * 20 19 18 22 22 Si 1.86304 * 109.47146 * 359.97438 * 20 19 18 23 23 C 1.34491 * 108.85101 * 359.71569 * 19 18 16 24 24 C 1.52994 * 109.47108 * 59.99544 * 10 9 8 25 25 C 1.52995 * 109.47326 * 300.00017 * 6 4 3 26 26 H 1.09000 * 109.47050 * 180.02562 * 1 2 3 27 27 H 1.09001 * 109.46801 * 300.00397 * 1 2 3 28 28 H 1.09001 * 109.46998 * 59.99993 * 1 2 3 29 29 H 1.09001 * 109.47002 * 119.99449 * 2 1 3 30 30 H 1.08993 * 109.46955 * 239.99886 * 2 1 3 31 31 H 1.09003 * 109.46845 * 299.99831 * 8 6 4 32 32 H 1.09003 * 109.47104 * 59.99749 * 8 6 4 33 33 H 1.09003 * 109.47210 * 59.99679 * 9 8 6 34 34 H 1.08995 * 109.47793 * 179.97438 * 9 8 6 35 35 H 0.97001 * 120.00318 * 334.99596 * 12 10 9 36 36 H 1.09003 * 109.47056 * 90.00237 * 17 16 15 37 37 H 1.09002 * 109.46850 * 209.99820 * 17 16 15 38 38 H 1.08994 * 109.46899 * 329.99891 * 17 16 15 39 39 H 0.96996 * 124.84711 * 179.97438 * 18 16 15 40 40 H 1.08998 * 109.47184 * 239.97788 * 20 19 18 41 41 H 0.96701 * 113.99586 * 180.02562 * 21 20 19 42 42 H 1.48500 * 109.99709 * 60.00264 * 22 20 19 43 43 H 1.48500 * 109.99890 * 181.31981 * 22 20 19 44 44 H 1.08002 * 126.82996 * 180.26608 * 23 19 18 45 45 H 1.09003 * 109.47104 * 60.00437 * 24 10 9 46 46 H 1.09003 * 109.46845 * 180.02562 * 24 10 9 47 47 H 1.09008 * 109.47321 * 299.99980 * 25 6 4 48 48 H 1.09005 * 109.47122 * 59.99390 * 25 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3448 1.5448 0.0005 5 8 4.0808 0.5866 0.0015 6 6 3.9208 2.9374 0.0000 7 1 3.5844 3.4701 0.8895 8 6 5.4486 2.8573 0.0001 9 6 6.0335 4.2711 0.0002 10 6 5.5620 5.0181 -1.2491 11 1 5.8981 4.4859 -2.1391 12 7 6.1216 6.3720 -1.2487 13 6 6.2853 7.0338 -2.4113 14 8 5.9689 6.5069 -3.4608 15 6 6.8472 8.3950 -2.4110 16 6 7.0738 9.1910 -3.4998 17 6 6.7891 8.8253 -4.9338 18 7 7.5956 10.3567 -3.0728 19 6 7.7200 10.3502 -1.7140 20 6 8.2645 11.4796 -0.8781 21 8 7.2634 11.9155 0.0438 22 14 8.7467 12.8967 -1.9873 23 6 7.2709 9.1736 -1.2422 24 6 4.0342 5.0982 -1.2492 25 6 3.4499 3.6836 -1.2499 26 1 -0.3633 -1.0277 0.0005 27 1 -0.3633 0.5139 0.8900 28 1 -0.3633 0.5138 -0.8900 29 1 1.8934 -0.5138 0.8900 30 1 1.8933 -0.5138 -0.8899 31 1 5.7845 2.3256 0.8904 32 1 5.7847 2.3248 -0.8896 33 1 5.6975 4.8033 0.8902 34 1 7.1220 4.2141 0.0008 35 1 6.3742 6.7922 -0.4117 36 1 5.7740 9.1276 -5.1911 37 1 7.4969 9.3365 -5.5864 38 1 6.8907 7.7476 -5.0609 39 1 7.8471 11.0954 -3.6489 40 1 9.1399 11.1350 -0.3277 41 1 7.5451 12.6428 0.6155 42 1 7.5617 13.3758 -2.7434 43 1 9.3147 14.0047 -1.1779 44 1 7.2328 8.8625 -0.2086 45 1 3.6982 5.6304 -0.3593 46 1 3.6983 5.6300 -2.1395 47 1 3.7863 3.1510 -2.1395 48 1 2.3613 3.7406 -1.2505 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14589458_9865296.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:33:02 Heat of formation + Delta-G solvation = -125.307958 kcal Electronic energy + Delta-G solvation = -29200.910839 eV Core-core repulsion = 25029.419114 eV Total energy + Delta-G solvation = -4171.491724 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.177 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -42.42204 -41.66364 -40.40204 -38.76941 -37.94899 -37.42815 -35.11283 -32.86914 -32.77651 -32.27063 -31.80863 -30.54458 -28.98925 -26.01760 -25.05632 -23.90185 -23.73062 -22.86838 -21.74941 -21.31502 -21.09146 -20.20139 -18.78338 -18.55867 -18.10730 -17.62988 -17.49220 -17.10085 -16.81589 -16.29895 -15.90100 -15.63394 -15.35064 -15.24036 -14.87261 -14.74793 -14.58685 -14.52834 -14.33825 -14.12228 -14.01188 -13.80146 -13.62456 -13.42921 -13.41811 -13.21789 -12.94805 -12.85827 -12.67025 -12.53696 -12.44981 -12.30324 -12.18964 -12.16370 -11.56833 -11.43324 -11.33708 -11.15747 -10.80485 -10.51549 -9.94726 -9.73272 -9.07689 -5.27314 0.83423 0.96575 1.28026 1.30188 1.32028 1.67673 1.72629 1.99965 2.46403 2.73643 3.25127 3.53469 3.60530 3.63394 3.68078 3.89015 3.95846 4.01421 4.04818 4.11935 4.13741 4.20770 4.24136 4.29422 4.32083 4.34319 4.39254 4.44222 4.55882 4.67419 4.73417 4.74291 4.80973 4.81087 4.84963 4.98163 5.02605 5.05919 5.06418 5.12617 5.15162 5.27299 5.29637 5.38267 5.56383 5.69632 5.77606 5.92443 6.23924 6.39363 6.77987 6.85231 7.55233 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.357 6.357 4 C 0.465 3.535 5 O -0.507 6.507 6 C -0.081 4.081 7 H 0.111 0.889 8 C -0.100 4.100 9 C -0.125 4.125 10 C 0.145 3.855 11 H 0.091 0.909 12 N -0.725 5.725 13 C 0.595 3.405 14 O -0.548 6.548 15 C -0.241 4.241 16 C 0.125 3.875 17 C -0.099 4.099 18 N -0.544 5.544 19 C 0.017 3.983 20 C -0.041 4.041 21 O -0.531 6.531 22 Si 0.664 3.336 23 C -0.126 4.126 24 C -0.127 4.127 25 C -0.108 4.108 26 H 0.081 0.919 27 H 0.067 0.933 28 H 0.067 0.933 29 H 0.070 0.930 30 H 0.070 0.930 31 H 0.078 0.922 32 H 0.077 0.923 33 H 0.072 0.928 34 H 0.078 0.922 35 H 0.400 0.600 36 H 0.080 0.920 37 H 0.067 0.933 38 H 0.104 0.896 39 H 0.414 0.586 40 H 0.088 0.912 41 H 0.383 0.617 42 H -0.250 1.250 43 H -0.250 1.250 44 H 0.146 0.854 45 H 0.068 0.932 46 H 0.076 0.924 47 H 0.072 0.928 48 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.153 3.799 1.401 4.586 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.274 6.274 4 C 0.308 3.692 5 O -0.394 6.394 6 C -0.100 4.100 7 H 0.129 0.871 8 C -0.138 4.138 9 C -0.163 4.163 10 C 0.040 3.960 11 H 0.109 0.891 12 N -0.375 5.375 13 C 0.385 3.615 14 O -0.427 6.427 15 C -0.251 4.251 16 C 0.006 3.994 17 C -0.156 4.156 18 N -0.144 5.144 19 C -0.091 4.091 20 C -0.152 4.152 21 O -0.338 6.338 22 Si 0.564 3.436 23 C -0.150 4.150 24 C -0.166 4.166 25 C -0.146 4.146 26 H 0.099 0.901 27 H 0.086 0.914 28 H 0.086 0.914 29 H 0.088 0.912 30 H 0.089 0.911 31 H 0.097 0.903 32 H 0.096 0.904 33 H 0.090 0.910 34 H 0.096 0.904 35 H 0.234 0.766 36 H 0.099 0.901 37 H 0.086 0.914 38 H 0.123 0.877 39 H 0.253 0.747 40 H 0.106 0.894 41 H 0.232 0.768 42 H -0.174 1.174 43 H -0.173 1.173 44 H 0.163 0.837 45 H 0.087 0.913 46 H 0.095 0.905 47 H 0.091 0.909 48 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges 1.706 3.603 0.119 3.988 hybrid contribution -0.174 0.851 1.521 1.752 sum 1.532 4.454 1.640 4.987 Atomic orbital electron populations 1.21820 0.92389 1.03206 1.03639 1.23068 0.95560 0.79977 1.02695 1.86510 1.24495 1.32618 1.83801 1.23774 0.80635 0.92661 0.72129 1.90683 1.60459 1.43181 1.45062 1.21182 0.96751 0.89722 1.02311 0.87133 1.21388 0.91491 0.96593 1.04360 1.21815 1.01519 0.95397 0.97606 1.20996 0.92954 0.82513 0.99515 0.89067 1.45807 1.65773 1.16751 1.09163 1.17295 0.76778 0.84089 0.83365 1.90749 1.51725 1.68995 1.31225 1.20093 1.15871 0.96168 0.92972 1.20387 0.97107 0.85437 0.96423 1.20653 1.02265 1.05045 0.87656 1.41636 1.50810 1.15133 1.06800 1.19086 1.10351 0.97282 0.82387 1.23971 0.93175 1.01605 0.96460 1.86609 1.40307 1.55651 1.51254 0.95695 0.84512 0.78970 0.84429 1.21746 1.02688 0.92940 0.97672 1.21936 0.95050 0.96287 1.03314 1.21505 1.01649 0.95453 0.95974 0.90066 0.91406 0.91357 0.91170 0.91130 0.90297 0.90432 0.90959 0.90351 0.76595 0.90112 0.91390 0.87709 0.74750 0.89398 0.76834 1.17448 1.17332 0.83653 0.91285 0.90516 0.90938 0.90068 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.17 10.29 37.16 0.38 0.55 16 2 C 0.06 0.06 6.19 37.16 0.23 0.29 16 3 O -0.36 -0.80 10.12 -39.26 -0.40 -1.20 16 4 C 0.47 1.22 7.26 36.01 0.26 1.48 16 5 O -0.51 -2.76 15.73 -18.75 -0.29 -3.06 16 6 C -0.08 0.01 2.63 -91.78 -0.24 -0.23 16 7 H 0.11 -0.18 8.14 -51.93 -0.42 -0.61 16 8 C -0.10 0.03 4.49 -26.74 -0.12 -0.09 16 9 C -0.13 0.20 5.39 -26.73 -0.14 0.06 16 10 C 0.14 0.02 2.45 -67.93 -0.17 -0.14 16 11 H 0.09 0.19 7.58 -51.93 -0.39 -0.20 16 12 N -0.72 -0.38 5.07 -54.93 -0.28 -0.66 16 13 C 0.60 1.98 7.77 -12.59 -0.10 1.88 16 14 O -0.55 -3.33 14.48 5.25 0.08 -3.25 16 15 C -0.24 -0.59 6.29 -103.35 -0.65 -1.24 16 16 C 0.13 0.18 7.17 -81.88 -0.59 -0.41 16 17 C -0.10 -0.01 9.88 36.00 0.36 0.34 16 18 N -0.54 0.15 5.41 -5.42 -0.03 0.12 16 19 C 0.02 0.01 6.14 -81.87 -0.50 -0.50 16 20 C -0.04 0.06 2.97 36.00 0.11 0.17 16 21 O -0.53 0.12 12.84 -35.23 -0.45 -0.33 16 22 Si 0.66 -1.69 30.94 -169.99 -5.26 -6.95 16 23 C -0.13 -0.15 10.43 -37.50 -0.39 -0.54 16 24 C -0.13 0.00 5.50 -26.71 -0.15 -0.14 16 25 C -0.11 0.03 5.14 -26.71 -0.14 -0.11 16 26 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 27 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 28 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 29 H 0.07 0.06 8.13 -51.93 -0.42 -0.36 16 30 H 0.07 0.07 8.13 -51.93 -0.42 -0.35 16 31 H 0.08 0.00 8.10 -51.93 -0.42 -0.42 16 32 H 0.08 0.07 8.10 -51.93 -0.42 -0.35 16 33 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 34 H 0.08 -0.13 8.14 -51.93 -0.42 -0.56 16 35 H 0.40 -0.61 7.73 -40.82 -0.32 -0.92 16 36 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 37 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 38 H 0.10 0.20 6.47 -51.93 -0.34 -0.13 16 39 H 0.41 -1.17 6.70 -40.82 -0.27 -1.45 16 40 H 0.09 -0.29 7.96 -51.93 -0.41 -0.71 16 41 H 0.38 -1.64 8.74 45.56 0.40 -1.24 16 42 H -0.25 -0.15 7.11 56.52 0.40 0.26 16 43 H -0.25 0.11 7.11 56.52 0.40 0.51 16 44 H 0.15 -0.08 7.70 -52.49 -0.40 -0.48 16 45 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 46 H 0.08 0.15 8.14 -51.93 -0.42 -0.28 16 47 H 0.07 0.04 8.14 -51.92 -0.42 -0.38 16 48 H 0.08 -0.03 8.11 -51.93 -0.42 -0.45 16 LS Contribution 391.82 15.07 5.90 5.90 Total: 0.00 -9.61 391.82 -10.27 -19.89 By element: Atomic # 1 Polarization: -4.13 SS G_CDS: -7.69 Total: -11.82 kcal Atomic # 6 Polarization: 3.21 SS G_CDS: -1.85 Total: 1.36 kcal Atomic # 7 Polarization: -0.23 SS G_CDS: -0.31 Total: -0.54 kcal Atomic # 8 Polarization: -6.77 SS G_CDS: -1.07 Total: -7.84 kcal Atomic # 14 Polarization: -1.69 SS G_CDS: -5.26 Total: -6.95 kcal Total LS contribution 5.90 Total: 5.90 kcal Total: -9.61 -10.27 -19.89 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589458_9865296.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -105.419 kcal (2) G-P(sol) polarization free energy of solvation -9.615 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -115.034 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.274 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.889 kcal (6) G-S(sol) free energy of system = (1) + (5) -125.308 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds