Wall clock time and date at job start Sun Mar 7 2021 02:33:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 O 1.45202 * 109.46867 * 2 1 4 4 C 1.34232 * 116.99450 * 179.97438 * 3 2 1 5 5 O 1.20825 * 120.00145 * 359.97438 * 4 3 2 6 6 C 1.50701 * 119.99784 * 179.97438 * 4 3 2 7 7 H 1.09003 * 109.47248 * 59.99924 * 6 4 3 8 8 C 1.52994 * 109.47298 * 180.02562 * 6 4 3 9 9 C 1.52996 * 109.47595 * 180.02562 * 8 6 4 10 10 C 1.53008 * 109.46934 * 300.00158 * 9 8 6 11 11 H 1.09003 * 109.46781 * 299.99784 * 10 9 8 12 12 N 1.46495 * 109.46869 * 179.97438 * 10 9 8 13 13 C 1.34778 * 119.99912 * 154.99842 * 12 10 9 14 14 O 1.21626 * 120.00023 * 359.97438 * 13 12 10 15 15 C 1.47257 * 120.00347 * 179.97438 * 13 12 10 16 16 C 1.36773 * 126.94306 * 179.97438 * 15 13 12 17 17 C 1.50697 * 125.80247 * 359.97438 * 16 15 13 18 18 N 1.34664 * 108.39545 * 180.02562 * 16 15 13 19 19 C 1.36448 * 110.30053 * 359.97438 * 18 16 15 20 20 C 1.50695 * 125.57327 * 180.02562 * 19 18 16 21 21 O 1.42905 * 109.47205 * 119.97808 * 20 19 18 22 22 Si 1.86304 * 109.47146 * 359.97438 * 20 19 18 23 23 C 1.34491 * 108.85101 * 359.71569 * 19 18 16 24 24 C 1.52994 * 109.47108 * 59.99544 * 10 9 8 25 25 C 1.52995 * 109.47326 * 300.00017 * 6 4 3 26 26 H 1.09000 * 109.47050 * 180.02562 * 1 2 3 27 27 H 1.09001 * 109.46801 * 300.00397 * 1 2 3 28 28 H 1.09001 * 109.46998 * 59.99993 * 1 2 3 29 29 H 1.09001 * 109.47002 * 119.99449 * 2 1 3 30 30 H 1.08993 * 109.46955 * 239.99886 * 2 1 3 31 31 H 1.09003 * 109.46845 * 299.99831 * 8 6 4 32 32 H 1.09003 * 109.47104 * 59.99749 * 8 6 4 33 33 H 1.09003 * 109.47210 * 59.99679 * 9 8 6 34 34 H 1.08995 * 109.47793 * 179.97438 * 9 8 6 35 35 H 0.97001 * 120.00318 * 334.99596 * 12 10 9 36 36 H 1.09003 * 109.47056 * 90.00237 * 17 16 15 37 37 H 1.09002 * 109.46850 * 209.99820 * 17 16 15 38 38 H 1.08994 * 109.46899 * 329.99891 * 17 16 15 39 39 H 0.96996 * 124.84711 * 179.97438 * 18 16 15 40 40 H 1.08998 * 109.47184 * 239.97788 * 20 19 18 41 41 H 0.96701 * 113.99586 * 180.02562 * 21 20 19 42 42 H 1.48500 * 109.99709 * 60.00264 * 22 20 19 43 43 H 1.48500 * 109.99890 * 181.31981 * 22 20 19 44 44 H 1.08002 * 126.82996 * 180.26608 * 23 19 18 45 45 H 1.09003 * 109.47104 * 60.00437 * 24 10 9 46 46 H 1.09003 * 109.46845 * 180.02562 * 24 10 9 47 47 H 1.09008 * 109.47321 * 299.99980 * 25 6 4 48 48 H 1.09005 * 109.47122 * 59.99390 * 25 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3448 1.5448 0.0005 5 8 4.0808 0.5866 0.0015 6 6 3.9208 2.9374 0.0000 7 1 3.5844 3.4701 0.8895 8 6 5.4486 2.8573 0.0001 9 6 6.0335 4.2711 0.0002 10 6 5.5620 5.0181 -1.2491 11 1 5.8981 4.4859 -2.1391 12 7 6.1216 6.3720 -1.2487 13 6 6.2853 7.0338 -2.4113 14 8 5.9689 6.5069 -3.4608 15 6 6.8472 8.3950 -2.4110 16 6 7.0738 9.1910 -3.4998 17 6 6.7891 8.8253 -4.9338 18 7 7.5956 10.3567 -3.0728 19 6 7.7200 10.3502 -1.7140 20 6 8.2645 11.4796 -0.8781 21 8 7.2634 11.9155 0.0438 22 14 8.7467 12.8967 -1.9873 23 6 7.2709 9.1736 -1.2422 24 6 4.0342 5.0982 -1.2492 25 6 3.4499 3.6836 -1.2499 26 1 -0.3633 -1.0277 0.0005 27 1 -0.3633 0.5139 0.8900 28 1 -0.3633 0.5138 -0.8900 29 1 1.8934 -0.5138 0.8900 30 1 1.8933 -0.5138 -0.8899 31 1 5.7845 2.3256 0.8904 32 1 5.7847 2.3248 -0.8896 33 1 5.6975 4.8033 0.8902 34 1 7.1220 4.2141 0.0008 35 1 6.3742 6.7922 -0.4117 36 1 5.7740 9.1276 -5.1911 37 1 7.4969 9.3365 -5.5864 38 1 6.8907 7.7476 -5.0609 39 1 7.8471 11.0954 -3.6489 40 1 9.1399 11.1350 -0.3277 41 1 7.5451 12.6428 0.6155 42 1 7.5617 13.3758 -2.7434 43 1 9.3147 14.0047 -1.1779 44 1 7.2328 8.8625 -0.2086 45 1 3.6982 5.6304 -0.3593 46 1 3.6983 5.6300 -2.1395 47 1 3.7863 3.1510 -2.1395 48 1 2.3613 3.7406 -1.2505 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14589458_9865296.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:33:01 Heat of formation + Delta-G solvation = -124.823673 kcal Electronic energy + Delta-G solvation = -29200.889839 eV Core-core repulsion = 25029.419114 eV Total energy + Delta-G solvation = -4171.470724 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.177 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -42.45098 -41.83546 -40.54476 -38.89118 -37.85861 -37.64671 -35.26571 -32.87850 -32.82470 -32.31379 -31.81338 -30.59864 -28.94768 -26.08818 -25.08117 -23.91650 -23.75554 -22.95518 -21.83742 -21.33975 -21.17307 -20.28632 -18.74332 -18.67034 -18.11476 -17.72371 -17.65596 -17.19185 -16.94012 -16.32062 -15.91178 -15.68456 -15.35049 -15.25504 -14.95104 -14.84126 -14.67995 -14.54035 -14.43110 -14.06551 -14.05320 -13.81529 -13.65815 -13.43381 -13.41325 -13.23176 -12.94475 -12.90796 -12.72054 -12.53104 -12.51263 -12.35030 -12.17774 -12.11774 -11.60903 -11.52282 -11.43511 -11.30433 -10.87222 -10.54382 -10.09189 -9.77478 -9.11784 -5.07280 0.72285 1.09753 1.10335 1.30545 1.46842 1.63317 1.81319 2.03208 2.41037 2.56996 3.41684 3.48409 3.58528 3.65692 3.71151 3.90819 3.93860 3.97935 4.03433 4.09444 4.13662 4.20415 4.24871 4.31089 4.33679 4.36783 4.44607 4.46619 4.54722 4.65762 4.72529 4.76985 4.79504 4.83444 4.88516 4.95682 5.05243 5.05782 5.09804 5.11541 5.15725 5.24964 5.28449 5.35961 5.44323 5.62328 5.72623 5.88917 6.41267 6.58702 6.65997 6.70857 7.39901 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.053 3.947 3 O -0.360 6.360 4 C 0.464 3.536 5 O -0.540 6.540 6 C -0.075 4.075 7 H 0.136 0.864 8 C -0.097 4.097 9 C -0.114 4.114 10 C 0.145 3.855 11 H 0.066 0.934 12 N -0.712 5.712 13 C 0.589 3.411 14 O -0.585 6.585 15 C -0.265 4.265 16 C 0.116 3.884 17 C -0.096 4.096 18 N -0.537 5.537 19 C 0.012 3.988 20 C -0.049 4.049 21 O -0.553 6.553 22 Si 0.748 3.252 23 C -0.136 4.136 24 C -0.119 4.119 25 C -0.101 4.101 26 H 0.096 0.904 27 H 0.070 0.930 28 H 0.067 0.933 29 H 0.068 0.932 30 H 0.065 0.935 31 H 0.079 0.921 32 H 0.059 0.941 33 H 0.095 0.905 34 H 0.083 0.917 35 H 0.412 0.588 36 H 0.079 0.921 37 H 0.093 0.907 38 H 0.084 0.916 39 H 0.425 0.575 40 H 0.112 0.888 41 H 0.399 0.601 42 H -0.294 1.294 43 H -0.275 1.275 44 H 0.160 0.840 45 H 0.086 0.914 46 H 0.054 0.946 47 H 0.058 0.942 48 H 0.086 0.914 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.514 4.938 2.724 6.175 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.020 4.020 3 O -0.277 6.277 4 C 0.309 3.691 5 O -0.430 6.430 6 C -0.093 4.093 7 H 0.153 0.847 8 C -0.136 4.136 9 C -0.151 4.151 10 C 0.041 3.959 11 H 0.084 0.916 12 N -0.363 5.363 13 C 0.379 3.621 14 O -0.467 6.467 15 C -0.274 4.274 16 C -0.003 4.003 17 C -0.153 4.153 18 N -0.137 5.137 19 C -0.097 4.097 20 C -0.159 4.159 21 O -0.364 6.364 22 Si 0.652 3.348 23 C -0.160 4.160 24 C -0.158 4.158 25 C -0.139 4.139 26 H 0.114 0.886 27 H 0.089 0.911 28 H 0.086 0.914 29 H 0.087 0.913 30 H 0.083 0.917 31 H 0.098 0.902 32 H 0.078 0.922 33 H 0.113 0.887 34 H 0.101 0.899 35 H 0.248 0.752 36 H 0.098 0.902 37 H 0.112 0.888 38 H 0.102 0.898 39 H 0.266 0.734 40 H 0.130 0.870 41 H 0.251 0.749 42 H -0.222 1.222 43 H -0.201 1.201 44 H 0.177 0.823 45 H 0.104 0.896 46 H 0.073 0.927 47 H 0.077 0.923 48 H 0.104 0.896 Dipole moment (debyes) X Y Z Total from point charges 2.080 4.754 1.484 5.397 hybrid contribution -0.319 0.519 1.112 1.268 sum 1.761 5.273 2.596 6.135 Atomic orbital electron populations 1.21824 0.90684 1.04244 1.03736 1.23244 0.96934 0.79457 1.02401 1.86520 1.24335 1.33374 1.83479 1.24320 0.80527 0.93305 0.70969 1.90665 1.61117 1.44450 1.46771 1.21255 0.96658 0.88270 1.03146 0.84658 1.21351 0.91457 0.97207 1.03551 1.21736 1.01722 0.94359 0.97322 1.20977 0.93136 0.82302 0.99525 0.91616 1.45710 1.64896 1.16618 1.09027 1.17565 0.76515 0.84567 0.83464 1.90726 1.53523 1.69907 1.32585 1.20215 1.16956 0.96120 0.94153 1.20576 0.97079 0.85932 0.96756 1.20611 1.02976 1.03966 0.87752 1.41645 1.50101 1.14976 1.06972 1.19468 1.09772 0.97730 0.82683 1.24217 0.93429 1.01487 0.96754 1.86556 1.41256 1.56679 1.51871 0.94716 0.81653 0.76630 0.81836 1.21961 1.02943 0.93083 0.98006 1.21845 0.94761 0.96169 1.03013 1.21428 1.01860 0.95145 0.95500 0.88578 0.91134 0.91352 0.91317 0.91662 0.90193 0.92220 0.88652 0.89877 0.75175 0.90195 0.88831 0.89776 0.73409 0.87019 0.74944 1.22162 1.20087 0.82276 0.89583 0.92691 0.92336 0.89586 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.35 10.29 71.98 0.74 1.09 16 2 C 0.05 0.13 6.19 71.98 0.45 0.58 16 3 O -0.36 -1.78 10.12 -51.44 -0.52 -2.30 16 4 C 0.46 2.77 7.26 71.24 0.52 3.28 16 5 O -0.54 -6.63 15.73 21.97 0.35 -6.29 16 6 C -0.07 0.03 2.63 -11.54 -0.03 0.00 16 7 H 0.14 -0.68 8.14 -2.39 -0.02 -0.70 16 8 C -0.10 0.04 4.49 30.59 0.14 0.17 16 9 C -0.11 0.43 5.39 30.60 0.16 0.59 16 10 C 0.15 0.16 2.45 44.99 0.11 0.27 16 11 H 0.07 0.43 7.58 -2.39 -0.02 0.41 16 12 N -0.71 -1.10 5.07 -445.96 -2.26 -3.37 16 13 C 0.59 4.77 7.77 86.61 0.67 5.44 16 14 O -0.59 -8.60 14.48 -4.11 -0.06 -8.66 16 15 C -0.26 -1.50 6.29 -19.04 -0.12 -1.62 16 16 C 0.12 0.40 7.17 41.78 0.30 0.70 16 17 C -0.10 -0.12 9.88 71.23 0.70 0.58 16 18 N -0.54 0.43 5.41 -171.07 -0.93 -0.49 16 19 C 0.01 0.00 6.14 40.98 0.25 0.25 16 20 C -0.05 0.21 2.97 71.23 0.21 0.43 16 21 O -0.55 0.86 12.84 -148.98 -1.91 -1.06 16 22 Si 0.75 -4.44 30.94 68.60 2.12 -2.32 16 23 C -0.14 -0.27 10.43 23.62 0.25 -0.02 16 24 C -0.12 -0.06 5.50 30.61 0.17 0.11 16 25 C -0.10 -0.02 5.14 30.61 0.16 0.14 16 26 H 0.10 -0.51 8.14 -2.39 -0.02 -0.53 16 27 H 0.07 -0.19 8.14 -2.39 -0.02 -0.20 16 28 H 0.07 -0.15 8.14 -2.39 -0.02 -0.16 16 29 H 0.07 0.18 8.13 -2.39 -0.02 0.16 16 30 H 0.06 0.22 8.13 -2.39 -0.02 0.20 16 31 H 0.08 -0.01 8.10 -2.39 -0.02 -0.03 16 32 H 0.06 0.20 8.10 -2.39 -0.02 0.18 16 33 H 0.09 -0.74 8.14 -2.39 -0.02 -0.76 16 34 H 0.08 -0.34 8.14 -2.39 -0.02 -0.36 16 35 H 0.41 -1.46 7.73 -92.71 -0.72 -2.17 16 36 H 0.08 0.10 8.14 -2.39 -0.02 0.08 16 37 H 0.09 -0.43 8.14 -2.39 -0.02 -0.45 16 38 H 0.08 0.51 6.47 -2.39 -0.02 0.49 16 39 H 0.42 -2.64 6.70 -92.71 -0.62 -3.26 16 40 H 0.11 -1.00 7.96 -2.39 -0.02 -1.01 16 41 H 0.40 -3.89 8.74 -74.06 -0.65 -4.54 16 42 H -0.29 -0.42 7.11 99.48 0.71 0.28 16 43 H -0.28 0.45 7.11 99.48 0.71 1.16 16 44 H 0.16 -0.32 7.70 -2.91 -0.02 -0.34 16 45 H 0.09 -0.23 8.14 -2.39 -0.02 -0.25 16 46 H 0.05 0.30 8.14 -2.39 -0.02 0.28 16 47 H 0.06 0.18 8.14 -2.38 -0.02 0.16 16 48 H 0.09 -0.05 8.11 -2.38 -0.02 -0.07 16 Total: 0.00 -24.43 391.82 0.51 -23.92 By element: Atomic # 1 Polarization: -10.47 SS G_CDS: -0.96 Total: -11.43 kcal Atomic # 6 Polarization: 7.31 SS G_CDS: 4.68 Total: 11.99 kcal Atomic # 7 Polarization: -0.67 SS G_CDS: -3.19 Total: -3.86 kcal Atomic # 8 Polarization: -16.16 SS G_CDS: -2.15 Total: -18.30 kcal Atomic # 14 Polarization: -4.44 SS G_CDS: 2.12 Total: -2.32 kcal Total: -24.43 0.51 -23.92 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589458_9865296.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -100.902 kcal (2) G-P(sol) polarization free energy of solvation -24.431 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -125.333 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.509 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.922 kcal (6) G-S(sol) free energy of system = (1) + (5) -124.824 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds