Wall clock time and date at job start Sun Mar 7 2021 00:05:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 O 1.42899 * 109.46792 * 2 1 4 4 C 1.35901 * 117.00286 * 84.84436 * 3 2 1 5 5 C 1.38724 * 120.05586 * 354.62245 * 4 3 2 6 6 C 1.38150 * 119.94624 * 179.97438 * 5 4 3 7 7 C 1.38263 * 120.05304 * 359.97438 * 6 5 4 8 8 C 1.50702 * 119.94410 * 180.02562 * 7 6 5 9 9 O 1.42906 * 109.46703 * 299.99971 * 8 7 6 10 10 Si 1.86300 * 109.47325 * 180.02562 * 8 7 6 11 11 C 1.38270 * 120.11378 * 0.27390 * 7 6 5 12 12 C 1.38150 * 120.05063 * 359.45462 * 11 7 6 13 13 C 1.50692 * 109.47173 * 239.99951 * 2 1 3 14 14 O 1.21280 * 120.00262 * 120.00037 * 13 2 1 15 15 N 1.34779 * 120.00213 * 299.99398 * 13 2 1 16 16 C 1.46496 * 120.00299 * 179.97438 * 15 13 2 17 17 H 1.09003 * 112.85114 * 336.20052 * 16 15 13 18 18 C 1.53790 * 113.61273 * 107.50522 * 16 15 13 19 19 C 1.53783 * 87.07785 * 139.98125 * 18 16 15 20 20 H 1.09002 * 113.68880 * 89.13243 * 19 18 16 21 21 C 1.53001 * 113.61205 * 220.01477 * 19 18 16 22 22 N 1.46497 * 109.47602 * 272.50293 * 21 19 18 23 23 C 1.34420 * 126.82617 * 124.99859 * 22 21 19 24 24 N 1.30830 * 108.07908 * 179.97438 * 23 22 21 25 25 C 1.33237 * 109.82937 * 0.02562 * 24 23 22 26 26 N 1.30721 * 108.94863 * 359.75415 * 25 24 23 27 27 C 1.53773 * 87.08353 * 334.56919 * 19 18 16 28 28 H 1.09003 * 109.47036 * 180.02562 * 1 2 3 29 29 H 1.09003 * 109.46843 * 299.99667 * 1 2 3 30 30 H 1.09000 * 109.47423 * 60.00449 * 1 2 3 31 31 H 1.09000 * 109.47423 * 119.99551 * 2 1 3 32 32 H 1.08003 * 120.02817 * 359.95640 * 5 4 3 33 33 H 1.07998 * 119.96857 * 179.97438 * 6 5 4 34 34 H 1.08997 * 109.47300 * 59.99937 * 8 7 6 35 35 H 0.96702 * 113.99896 * 300.00061 * 9 8 7 36 36 H 1.48503 * 109.99972 * 58.67487 * 10 8 7 37 37 H 1.48498 * 110.00323 * 179.97438 * 10 8 7 38 38 H 1.07994 * 119.97283 * 179.72797 * 11 7 6 39 39 H 1.07997 * 120.02350 * 180.27496 * 12 11 7 40 40 H 0.97000 * 119.99419 * 0.02562 * 15 13 2 41 41 H 1.08993 * 113.61330 * 254.52975 * 18 16 15 42 42 H 1.08997 * 113.61200 * 25.43418 * 18 16 15 43 43 H 1.09006 * 109.47032 * 32.50599 * 21 19 18 44 44 H 1.09005 * 109.46434 * 152.49732 * 21 19 18 45 45 H 1.08002 * 125.95922 * 0.02562 * 23 22 21 46 46 H 1.08000 * 125.53117 * 179.97438 * 25 24 23 47 47 H 1.09003 * 113.61484 * 270.88539 * 27 19 18 48 48 H 1.09005 * 113.61501 * 139.98181 * 27 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3473 0.0000 4 6 2.1093 1.9653 1.2060 5 6 1.6554 1.3307 2.3530 6 6 1.7617 1.9608 3.5778 7 6 2.3206 3.2227 3.6610 8 6 2.4359 3.9076 4.9985 9 8 1.1339 4.0676 5.5654 10 14 3.2245 5.5804 4.7737 11 6 2.7691 3.8596 2.5186 12 6 2.6701 3.2313 1.2922 13 6 2.0323 -0.7104 -1.2304 14 8 2.7296 -0.1210 -2.0287 15 7 1.7069 -2.0008 -1.4436 16 6 2.1947 -2.6912 -2.6400 17 1 2.4376 -2.0078 -3.4537 18 6 3.2978 -3.7226 -2.3493 19 6 2.6139 -4.6295 -3.3860 20 1 2.9718 -4.4779 -4.4044 21 6 2.5794 -6.1047 -2.9819 22 7 3.8105 -6.7621 -3.4273 23 6 4.6743 -7.4557 -2.6660 24 7 5.6422 -7.8823 -3.4360 25 6 5.4323 -7.4823 -4.6894 26 7 4.3201 -6.7969 -4.7356 27 6 1.3119 -3.8740 -3.0718 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3633 0.5138 0.8901 30 1 -0.3634 0.5137 -0.8900 31 1 1.8934 -0.5137 0.8900 32 1 1.2189 0.3449 2.2885 33 1 1.4081 1.4672 4.4709 34 1 3.0505 3.3024 5.6648 35 1 0.5318 4.5970 5.0247 36 1 2.4124 6.4038 3.8421 37 1 3.3434 6.2664 6.0853 38 1 3.2012 4.8470 2.5857 39 1 3.0246 3.7273 0.4008 40 1 1.1489 -2.4720 -0.8052 41 1 4.2932 -3.3929 -2.6467 42 1 3.2679 -4.1196 -1.3346 43 1 2.4977 -6.1826 -1.8977 44 1 1.7203 -6.5887 -3.4467 45 1 4.5845 -7.6311 -1.6041 46 1 6.0747 -7.6933 -5.5315 47 1 0.7390 -4.3124 -2.2546 48 1 0.7041 -3.6665 -3.9526 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14644236_10157680.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:05:29 Heat of formation + Delta-G solvation = 51.535337 kcal Electronic energy + Delta-G solvation = -30648.548327 eV Core-core repulsion = 26287.877052 eV Total energy + Delta-G solvation = -4360.671275 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.168 amu Computer time = 1.25 seconds Orbital eigenvalues (eV) -43.01278 -41.89934 -41.09463 -39.90106 -38.89920 -37.27304 -35.63173 -34.44052 -33.04239 -32.14450 -32.10390 -31.42971 -29.19879 -27.03677 -26.81446 -25.88167 -24.61079 -23.91591 -22.98830 -22.69520 -22.18452 -21.61276 -20.69773 -19.55884 -18.72713 -18.45689 -18.23835 -17.56614 -16.96487 -16.90933 -16.59878 -16.47442 -16.37559 -16.16999 -15.90738 -15.64197 -15.54313 -15.27838 -15.06782 -14.78184 -14.60999 -14.42331 -14.25529 -13.93971 -13.80786 -13.69286 -13.56852 -13.42622 -13.32974 -12.98306 -12.83155 -12.54673 -12.27056 -12.21218 -12.10734 -12.06343 -11.75015 -11.60252 -10.95373 -10.88281 -10.74034 -10.61613 -10.60094 -10.25671 -10.08454 -9.23919 -4.96434 0.20496 0.30530 0.66300 1.26284 1.28308 1.36020 1.43912 1.59070 1.95853 2.04723 2.37624 2.61524 3.09780 3.18504 3.23012 3.32466 3.35596 3.38438 3.46371 3.49947 3.66085 3.67645 3.69456 3.79455 3.80963 3.87768 3.97314 4.14010 4.15714 4.21428 4.28031 4.32930 4.34585 4.40725 4.48719 4.53570 4.57631 4.60859 4.69854 4.77828 4.81473 4.94738 4.99151 5.14625 5.25336 5.26799 5.29685 5.43716 5.47407 5.61785 5.79951 6.15562 6.31217 6.38541 6.99413 7.13147 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.178 4.178 2 C 0.066 3.934 3 O -0.283 6.283 4 C 0.135 3.865 5 C -0.212 4.212 6 C -0.051 4.051 7 C -0.156 4.156 8 C -0.069 4.069 9 O -0.531 6.531 10 Si 0.681 3.319 11 C -0.075 4.075 12 C -0.142 4.142 13 C 0.520 3.480 14 O -0.509 6.509 15 N -0.717 5.717 16 C 0.127 3.873 17 H 0.120 0.880 18 C -0.148 4.148 19 C -0.121 4.121 20 H 0.111 0.889 21 C 0.141 3.859 22 N -0.378 5.378 23 C 0.253 3.747 24 N -0.547 5.547 25 C 0.199 3.801 26 N -0.317 5.317 27 C -0.136 4.136 28 H 0.079 0.921 29 H 0.078 0.922 30 H 0.077 0.923 31 H 0.101 0.899 32 H 0.131 0.869 33 H 0.129 0.871 34 H 0.117 0.883 35 H 0.376 0.624 36 H -0.260 1.260 37 H -0.257 1.257 38 H 0.134 0.866 39 H 0.138 0.862 40 H 0.402 0.598 41 H 0.075 0.925 42 H 0.088 0.912 43 H 0.103 0.897 44 H 0.093 0.907 45 H 0.217 0.783 46 H 0.217 0.783 47 H 0.092 0.908 48 H 0.084 0.916 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.605 -2.973 2.968 5.536 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.235 4.235 2 C 0.006 3.994 3 O -0.196 6.196 4 C 0.090 3.910 5 C -0.231 4.231 6 C -0.069 4.069 7 C -0.156 4.156 8 C -0.179 4.179 9 O -0.338 6.338 10 Si 0.583 3.417 11 C -0.092 4.092 12 C -0.160 4.160 13 C 0.304 3.696 14 O -0.383 6.383 15 N -0.370 5.370 16 C 0.022 3.978 17 H 0.138 0.862 18 C -0.187 4.187 19 C -0.140 4.140 20 H 0.129 0.871 21 C 0.019 3.981 22 N -0.169 5.169 23 C -0.044 4.044 24 N -0.273 5.273 25 C -0.103 4.103 26 N -0.145 5.145 27 C -0.175 4.175 28 H 0.098 0.902 29 H 0.097 0.903 30 H 0.096 0.904 31 H 0.119 0.881 32 H 0.149 0.851 33 H 0.147 0.853 34 H 0.135 0.865 35 H 0.223 0.777 36 H -0.185 1.185 37 H -0.182 1.182 38 H 0.152 0.848 39 H 0.155 0.845 40 H 0.237 0.763 41 H 0.094 0.906 42 H 0.106 0.894 43 H 0.121 0.879 44 H 0.111 0.889 45 H 0.234 0.766 46 H 0.234 0.766 47 H 0.111 0.889 48 H 0.103 0.897 Dipole moment (debyes) X Y Z Total from point charges -2.962 -1.774 2.223 4.106 hybrid contribution -1.674 -0.511 0.608 1.853 sum -4.636 -2.285 2.831 5.893 Atomic orbital electron populations 1.22367 0.92331 1.03879 1.04952 1.22196 0.95870 0.83341 0.97989 1.86224 1.80905 1.25376 1.27085 1.19081 0.95164 0.92819 0.83973 1.21314 1.07267 1.01813 0.92664 1.20792 0.95458 0.93617 0.97024 1.20196 1.03732 0.96376 0.95332 1.24939 0.89056 1.09979 0.93946 1.86592 1.22526 1.74776 1.49879 0.95023 0.89978 0.75451 0.81279 1.20844 0.97793 0.99201 0.91382 1.20417 1.03255 0.93557 0.98783 1.20137 0.80464 0.81985 0.86993 1.90785 1.36009 1.65647 1.45811 1.45835 1.54166 1.11466 1.25542 1.22488 0.94754 0.92161 0.88351 0.86245 1.23596 0.99583 0.96301 0.99201 1.22703 0.97890 0.91914 1.01539 0.87088 1.21858 0.83552 0.92350 1.00320 1.50549 1.20296 1.40138 1.05924 1.26093 0.86523 0.92050 0.99729 1.70565 1.26541 1.27598 1.02638 1.26066 0.93917 0.94714 0.95646 1.78047 1.13969 1.24549 0.97955 1.23376 0.96326 0.95142 1.02610 0.90228 0.90272 0.90402 0.88106 0.85129 0.85261 0.86479 0.77662 1.18453 1.18214 0.84847 0.84458 0.76316 0.90614 0.89366 0.87910 0.88875 0.76635 0.76642 0.88948 0.89695 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.57 9.07 37.16 0.34 0.90 16 2 C 0.07 -0.07 2.65 -27.89 -0.07 -0.14 16 3 O -0.28 -0.68 9.33 -39.34 -0.37 -1.05 16 4 C 0.14 0.18 6.60 -39.22 -0.26 -0.08 16 5 C -0.21 0.08 8.24 -39.43 -0.32 -0.25 16 6 C -0.05 0.01 9.60 -39.60 -0.38 -0.37 16 7 C -0.16 0.01 5.39 -104.60 -0.56 -0.55 16 8 C -0.07 0.03 2.82 36.01 0.10 0.13 16 9 O -0.53 -0.48 12.77 -35.23 -0.45 -0.93 16 10 Si 0.68 -0.65 29.78 -169.99 -5.06 -5.71 16 11 C -0.07 0.01 8.66 -39.60 -0.34 -0.33 16 12 C -0.14 -0.15 9.99 -39.43 -0.39 -0.54 16 13 C 0.52 0.38 7.23 -10.99 -0.08 0.30 16 14 O -0.51 -2.97 16.10 -14.35 -0.23 -3.20 16 15 N -0.72 2.13 5.25 -53.02 -0.28 1.85 16 16 C 0.13 -0.31 4.24 -67.12 -0.28 -0.59 16 17 H 0.12 0.01 7.46 -51.93 -0.39 -0.37 16 18 C -0.15 0.41 7.43 -25.91 -0.19 0.22 16 19 C -0.12 0.41 3.88 -89.81 -0.35 0.06 16 20 H 0.11 -0.11 8.01 -51.93 -0.42 -0.53 16 21 C 0.14 -0.56 6.39 -4.04 -0.03 -0.59 16 22 N -0.38 0.15 3.69 -62.63 -0.23 -0.08 16 23 C 0.25 -0.12 12.63 -90.66 -1.14 -1.26 16 24 N -0.55 -1.43 11.19 -15.83 -0.18 -1.61 16 25 C 0.20 0.40 13.03 -91.81 -1.20 -0.79 16 26 N -0.32 -0.76 12.46 29.29 0.36 -0.40 16 27 C -0.14 0.65 7.39 -25.92 -0.19 0.46 16 28 H 0.08 -0.47 7.56 -51.93 -0.39 -0.86 16 29 H 0.08 -0.25 6.90 -51.93 -0.36 -0.61 16 30 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 31 H 0.10 -0.33 6.32 -51.93 -0.33 -0.66 16 32 H 0.13 -0.35 5.43 -52.48 -0.28 -0.64 16 33 H 0.13 -0.13 8.06 -52.49 -0.42 -0.56 16 34 H 0.12 -0.14 7.96 -51.93 -0.41 -0.55 16 35 H 0.38 -0.67 8.70 45.56 0.40 -0.27 16 36 H -0.26 -0.27 7.11 56.52 0.40 0.13 16 37 H -0.26 -0.62 7.11 56.52 0.40 -0.21 16 38 H 0.13 -0.26 4.87 -52.49 -0.26 -0.51 16 39 H 0.14 0.05 8.06 -52.49 -0.42 -0.37 16 40 H 0.40 -2.52 8.14 -40.82 -0.33 -2.86 16 41 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 42 H 0.09 -0.37 7.90 -51.93 -0.41 -0.78 16 43 H 0.10 -0.71 7.79 -51.93 -0.40 -1.11 16 44 H 0.09 -0.41 8.14 -51.93 -0.42 -0.83 16 45 H 0.22 -1.06 8.06 -52.49 -0.42 -1.48 16 46 H 0.22 -0.21 8.06 -52.49 -0.42 -0.63 16 47 H 0.09 -0.63 8.08 -51.93 -0.42 -1.05 16 48 H 0.08 -0.37 8.14 -51.93 -0.42 -0.79 16 LS Contribution 399.93 15.07 6.03 6.03 Total: 0.00 -12.72 399.93 -12.36 -25.07 By element: Atomic # 1 Polarization: -9.97 SS G_CDS: -6.59 Total: -16.55 kcal Atomic # 6 Polarization: 1.94 SS G_CDS: -5.36 Total: -3.42 kcal Atomic # 7 Polarization: 0.09 SS G_CDS: -0.32 Total: -0.23 kcal Atomic # 8 Polarization: -4.13 SS G_CDS: -1.05 Total: -5.18 kcal Atomic # 14 Polarization: -0.65 SS G_CDS: -5.06 Total: -5.71 kcal Total LS contribution 6.03 Total: 6.03 kcal Total: -12.72 -12.36 -25.07 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14644236_10157680.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 76.610 kcal (2) G-P(sol) polarization free energy of solvation -12.719 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 63.891 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.356 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.075 kcal (6) G-S(sol) free energy of system = (1) + (5) 51.535 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.25 seconds