Wall clock time and date at job start Sun Mar 7 2021 00:05:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86300 * 109.47509 * 2 1 4 4 C 1.50702 * 109.47007 * 239.99614 * 2 1 3 5 5 C 1.35452 * 126.06399 * 119.69475 * 4 2 1 6 6 N 1.35531 * 108.87427 * 179.86634 * 5 4 2 7 7 C 1.37658 * 108.64014 * 0.40119 * 6 5 4 8 8 C 1.46677 * 126.23213 * 179.75806 * 7 6 5 9 9 O 1.21695 * 119.99982 * 179.97438 * 8 7 6 10 10 N 1.34782 * 120.00236 * 359.97438 * 8 7 6 11 11 C 1.46491 * 120.00073 * 179.97438 * 10 8 7 12 12 H 1.09003 * 112.85039 * 23.80273 * 11 10 8 13 13 C 1.53789 * 113.61421 * 154.99448 * 11 10 8 14 14 C 1.53787 * 87.07834 * 139.98255 * 13 11 10 15 15 H 1.08996 * 113.61292 * 89.11672 * 14 13 11 16 16 C 1.52994 * 113.61037 * 219.93766 * 14 13 11 17 17 N 1.46506 * 109.46900 * 184.99868 * 16 14 13 18 18 C 1.34432 * 126.81941 * 124.70994 * 17 16 14 19 19 N 1.30838 * 108.07753 * 179.89727 * 18 17 16 20 20 C 1.33241 * 109.82212 * 0.37966 * 19 18 17 21 21 N 1.30708 * 108.95053 * 359.76338 * 20 19 18 22 22 C 1.53777 * 113.61809 * 252.49280 * 11 10 8 23 23 C 1.37870 * 107.53075 * 359.75493 * 7 6 5 24 24 H 0.96700 * 113.99509 * 59.99951 * 1 2 3 25 25 H 1.09004 * 109.46926 * 120.00048 * 2 1 3 26 26 H 1.48502 * 109.99691 * 59.99915 * 3 2 1 27 27 H 1.48495 * 109.99988 * 181.31552 * 3 2 1 28 28 H 1.08008 * 125.56580 * 359.97438 * 5 4 2 29 29 H 0.97000 * 125.68620 * 180.13256 * 6 5 4 30 30 H 0.97003 * 119.99596 * 359.97438 * 10 8 7 31 31 H 1.08995 * 113.61700 * 254.52807 * 13 11 10 32 32 H 1.08995 * 113.61158 * 25.44009 * 13 11 10 33 33 H 1.09000 * 109.47438 * 304.99972 * 16 14 13 34 34 H 1.08995 * 109.47552 * 65.00516 * 16 14 13 35 35 H 1.08005 * 125.96302 * 0.03855 * 18 17 16 36 36 H 1.08001 * 125.52447 * 179.72982 * 20 19 18 37 37 H 1.09000 * 113.60991 * 334.57407 * 22 11 10 38 38 H 1.08999 * 113.61324 * 105.46536 * 22 11 10 39 39 H 1.08009 * 126.45262 * 180.02562 * 23 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 2.7085 -0.1723 -2.2006 6 7 2.9555 -1.1180 -3.1395 7 6 2.3185 -2.2813 -2.7705 8 6 2.3254 -3.5464 -3.5127 9 8 1.7205 -4.5093 -3.0794 10 7 3.0018 -3.6425 -4.6745 11 6 3.0092 -4.9062 -5.4154 12 1 2.1502 -5.5367 -5.1855 13 6 3.2619 -4.7352 -6.9227 14 6 4.1430 -5.9928 -6.8377 15 1 3.5948 -6.9214 -6.9966 16 6 5.4190 -5.9049 -7.6772 17 7 6.1264 -7.1868 -7.6260 18 6 6.5044 -7.9408 -8.6728 19 7 7.1089 -9.0047 -8.2097 20 6 7.1288 -8.9693 -6.8779 21 7 6.5391 -7.8751 -6.4735 22 6 4.3545 -5.6486 -5.3540 23 6 1.6729 -2.0404 -1.5764 24 1 -0.3932 0.4417 -0.7651 25 1 1.7923 -0.5139 0.8900 26 1 1.5616 2.4678 1.2085 27 1 3.5347 1.7701 -0.0320 28 1 3.0735 0.8440 -2.2215 29 1 3.4887 -0.9946 -3.9403 30 1 3.4837 -2.8748 -5.0201 31 1 2.3688 -4.8683 -7.5331 32 1 3.8157 -3.8303 -7.1726 33 1 5.1592 -5.6743 -8.7103 34 1 6.0618 -5.1193 -7.2801 35 1 6.3399 -7.7078 -9.7146 36 1 7.5615 -9.7228 -6.2365 37 1 5.2069 -4.9933 -5.1749 38 1 4.3434 -6.5189 -4.6979 39 1 1.0797 -2.7463 -1.0138 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14644236_10543058.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:05:33 Heat of formation + Delta-G solvation = 103.639572 kcal Electronic energy + Delta-G solvation = -23567.469657 eV Core-core repulsion = 19901.615451 eV Total energy + Delta-G solvation = -3665.854206 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 304.132 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -43.01262 -42.52839 -41.04227 -39.33191 -37.63826 -35.58490 -34.16726 -32.52912 -32.14494 -30.81048 -29.17470 -26.96629 -26.64318 -25.15531 -23.56240 -22.91441 -22.25869 -21.46184 -21.05567 -20.69714 -19.84441 -18.46918 -17.58356 -17.40920 -17.03310 -16.76997 -16.45261 -16.17795 -15.87731 -15.78521 -15.57864 -15.19337 -14.89376 -14.84664 -14.45588 -14.39492 -13.93508 -13.89224 -13.70523 -13.49457 -13.25926 -12.99674 -12.41990 -12.24303 -12.11509 -11.96601 -11.60360 -11.14840 -10.94431 -10.75114 -10.65392 -10.39975 -10.23156 -9.95882 -9.33980 -5.06581 0.36856 0.66068 1.27720 1.31806 1.47767 1.63189 1.88697 1.97602 2.01837 2.04489 2.32676 3.04035 3.19306 3.37374 3.38844 3.54045 3.58601 3.70451 3.78173 3.84757 3.90678 3.95634 3.99471 4.04121 4.33008 4.35556 4.40434 4.49378 4.55010 4.67076 4.73415 4.86668 4.95499 5.00315 5.03838 5.27885 5.33791 5.47427 5.56269 5.76488 5.79262 6.15749 6.36156 6.70286 7.08154 7.13100 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.033 4.033 3 Si 0.687 3.313 4 C -0.211 4.211 5 C 0.035 3.965 6 N -0.536 5.536 7 C -0.060 4.060 8 C 0.591 3.409 9 O -0.522 6.522 10 N -0.723 5.723 11 C 0.124 3.876 12 H 0.120 0.880 13 C -0.137 4.137 14 C -0.119 4.119 15 H 0.102 0.898 16 C 0.141 3.859 17 N -0.380 5.380 18 C 0.252 3.748 19 N -0.546 5.546 20 C 0.197 3.803 21 N -0.312 5.312 22 C -0.135 4.135 23 C -0.074 4.074 24 H 0.377 0.623 25 H 0.111 0.889 26 H -0.256 1.256 27 H -0.258 1.258 28 H 0.176 0.824 29 H 0.417 0.583 30 H 0.394 0.606 31 H 0.084 0.916 32 H 0.090 0.910 33 H 0.105 0.895 34 H 0.090 0.910 35 H 0.218 0.782 36 H 0.217 0.783 37 H 0.086 0.914 38 H 0.079 0.921 39 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.179 6.979 -7.068 10.003 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.145 4.145 3 Si 0.589 3.411 4 C -0.218 4.218 5 C -0.102 4.102 6 N -0.132 5.132 7 C -0.172 4.172 8 C 0.379 3.621 9 O -0.397 6.397 10 N -0.373 5.373 11 C 0.019 3.981 12 H 0.138 0.862 13 C -0.176 4.176 14 C -0.139 4.139 15 H 0.120 0.880 16 C 0.019 3.981 17 N -0.171 5.171 18 C -0.045 4.045 19 N -0.273 5.273 20 C -0.106 4.106 21 N -0.140 5.140 22 C -0.174 4.174 23 C -0.101 4.101 24 H 0.224 0.776 25 H 0.129 0.871 26 H -0.180 1.180 27 H -0.183 1.183 28 H 0.193 0.807 29 H 0.255 0.745 30 H 0.228 0.772 31 H 0.102 0.898 32 H 0.109 0.891 33 H 0.123 0.877 34 H 0.108 0.892 35 H 0.235 0.765 36 H 0.233 0.767 37 H 0.104 0.896 38 H 0.098 0.902 39 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 1.405 6.536 -5.361 8.569 hybrid contribution 0.648 -0.023 -0.644 0.913 sum 2.053 6.512 -6.004 9.093 Atomic orbital electron populations 1.86505 1.17413 1.81730 1.49029 1.24378 0.84798 1.09026 0.96321 0.95165 0.80337 0.77796 0.87762 1.19910 1.06481 0.95854 0.99522 1.21874 1.02793 0.94855 0.90674 1.41911 1.40699 1.09675 1.20897 1.20414 1.08494 0.87525 1.00749 1.17089 0.78584 0.86231 0.80181 1.90885 1.43682 1.37401 1.67757 1.45833 1.53540 1.14546 1.23403 1.22538 0.99560 0.85559 0.90410 0.86213 1.23386 1.00307 0.97733 0.96144 1.22627 0.95257 0.99506 0.96494 0.88022 1.21853 0.92469 0.81401 1.02396 1.50585 1.43386 1.18684 1.04463 1.26140 0.94390 0.87803 0.96161 1.70573 1.23438 1.22809 1.10505 1.26084 0.97639 0.95870 0.90982 1.78092 1.19890 1.08885 1.07109 1.23461 0.97361 1.00961 0.95605 1.21231 0.99207 0.95746 0.93870 0.77565 0.87135 1.18050 1.18274 0.80732 0.74518 0.77227 0.89779 0.89122 0.87668 0.89164 0.76545 0.76698 0.89592 0.90238 0.83176 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.42 12.88 -35.23 -0.45 -0.88 16 2 C -0.03 0.00 3.02 36.01 0.11 0.11 16 3 Si 0.69 -1.31 30.59 -169.99 -5.20 -6.50 16 4 C -0.21 0.00 5.44 -105.02 -0.57 -0.57 16 5 C 0.03 -0.09 10.45 -16.91 -0.18 -0.26 16 6 N -0.54 1.56 5.99 -9.39 -0.06 1.51 16 7 C -0.06 -0.04 7.06 -81.98 -0.58 -0.62 16 8 C 0.59 1.17 7.79 -12.85 -0.10 1.07 16 9 O -0.52 -3.33 16.48 5.19 0.09 -3.24 16 10 N -0.72 1.34 5.35 -54.32 -0.29 1.05 16 11 C 0.12 -0.21 4.24 -67.12 -0.28 -0.49 16 12 H 0.12 0.07 7.46 -51.93 -0.39 -0.32 16 13 C -0.14 0.64 7.39 -25.91 -0.19 0.45 16 14 C -0.12 0.39 3.85 -89.81 -0.35 0.04 16 15 H 0.10 -0.18 8.14 -51.93 -0.42 -0.61 16 16 C 0.14 -0.55 6.39 -4.04 -0.03 -0.58 16 17 N -0.38 0.13 3.69 -62.63 -0.23 -0.10 16 18 C 0.25 -0.11 12.63 -90.65 -1.14 -1.26 16 19 N -0.55 -1.46 11.19 -15.83 -0.18 -1.63 16 20 C 0.20 0.42 13.03 -91.82 -1.20 -0.78 16 21 N -0.31 -0.75 12.57 29.29 0.37 -0.38 16 22 C -0.14 0.19 7.43 -25.92 -0.19 0.00 16 23 C -0.07 -0.16 10.59 -39.12 -0.41 -0.57 16 24 H 0.38 -1.23 8.70 45.56 0.40 -0.83 16 25 H 0.11 0.09 7.96 -51.93 -0.41 -0.32 16 26 H -0.26 -0.48 7.11 56.52 0.40 -0.08 16 27 H -0.26 -0.02 7.11 56.52 0.40 0.39 16 28 H 0.18 -0.96 6.19 -52.48 -0.32 -1.29 16 29 H 0.42 -2.69 8.19 -40.82 -0.33 -3.03 16 30 H 0.39 -2.02 7.86 -40.82 -0.32 -2.34 16 31 H 0.08 -0.40 8.14 -51.93 -0.42 -0.82 16 32 H 0.09 -0.59 8.08 -51.93 -0.42 -1.01 16 33 H 0.11 -0.72 8.09 -51.93 -0.42 -1.14 16 34 H 0.09 -0.40 7.85 -51.93 -0.41 -0.80 16 35 H 0.22 -1.07 8.06 -52.48 -0.42 -1.49 16 36 H 0.22 -0.16 8.06 -52.49 -0.42 -0.59 16 37 H 0.09 -0.14 7.90 -51.93 -0.41 -0.56 16 38 H 0.08 0.09 8.14 -51.93 -0.42 -0.33 16 39 H 0.15 0.50 8.06 -52.48 -0.42 0.08 16 LS Contribution 339.12 15.07 5.11 5.11 Total: 0.00 -12.89 339.12 -10.73 -23.62 By element: Atomic # 1 Polarization: -10.30 SS G_CDS: -4.78 Total: -15.08 kcal Atomic # 6 Polarization: 1.64 SS G_CDS: -5.11 Total: -3.47 kcal Atomic # 7 Polarization: 0.83 SS G_CDS: -0.39 Total: 0.44 kcal Atomic # 8 Polarization: -3.75 SS G_CDS: -0.37 Total: -4.12 kcal Atomic # 14 Polarization: -1.31 SS G_CDS: -5.20 Total: -6.50 kcal Total LS contribution 5.11 Total: 5.11 kcal Total: -12.89 -10.73 -23.62 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14644236_10543058.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 127.261 kcal (2) G-P(sol) polarization free energy of solvation -12.889 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 114.372 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.733 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.622 kcal (6) G-S(sol) free energy of system = (1) + (5) 103.640 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds