Wall clock time and date at job start Sun Mar 7 2021 00:05:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46504 * 1 3 3 C 1.35533 * 125.67470 * 2 1 4 4 C 1.35455 * 108.87091 * 180.02562 * 3 2 1 5 5 C 1.50690 * 126.06961 * 180.02562 * 4 3 2 6 6 O 1.42899 * 109.47576 * 119.97456 * 5 4 3 7 7 Si 1.86302 * 109.47142 * 359.97438 * 5 4 3 8 8 C 1.39836 * 107.86187 * 359.73761 * 4 3 2 9 9 C 1.37650 * 125.67699 * 180.02562 * 2 1 3 10 10 C 1.46677 * 126.23710 * 359.97438 * 9 2 1 11 11 O 1.21693 * 120.00032 * 4.96688 * 10 9 2 12 12 N 1.34777 * 120.00088 * 184.97091 * 10 9 2 13 13 C 1.46501 * 120.00108 * 174.27907 * 12 10 9 14 14 H 1.09007 * 112.84608 * 25.32832 * 13 12 10 15 15 C 1.53778 * 113.61524 * 156.52273 * 13 12 10 16 16 C 1.53789 * 87.07851 * 140.06746 * 15 13 12 17 17 H 1.08997 * 113.61442 * 89.11813 * 16 15 13 18 18 C 1.53000 * 113.61174 * 220.02399 * 16 15 13 19 19 N 1.46508 * 109.46759 * 184.99933 * 18 16 15 20 20 C 1.34424 * 126.81889 * 124.71042 * 19 18 16 21 21 N 1.30838 * 108.07260 * 179.89366 * 20 19 18 22 22 C 1.33246 * 109.82904 * 0.37883 * 21 20 19 23 23 N 1.30710 * 108.94361 * 359.76458 * 22 21 20 24 24 C 1.53777 * 113.69004 * 254.06357 * 13 12 10 25 25 H 1.09004 * 109.47160 * 264.27292 * 1 2 3 26 26 H 1.08997 * 109.47172 * 24.27746 * 1 2 3 27 27 H 1.08995 * 109.46886 * 144.27936 * 1 2 3 28 28 H 1.07995 * 125.56796 * 0.05616 * 3 2 1 29 29 H 1.09000 * 109.47886 * 239.97617 * 5 4 3 30 30 H 0.96705 * 113.99716 * 300.00419 * 6 5 4 31 31 H 1.48499 * 110.00086 * 58.67838 * 7 5 4 32 32 H 1.48507 * 110.00378 * 180.02562 * 7 5 4 33 33 H 1.08000 * 126.45808 * 180.29916 * 8 4 3 34 34 H 0.96998 * 119.99745 * 354.27182 * 12 10 9 35 35 H 1.08997 * 113.61863 * 254.61436 * 15 13 12 36 36 H 1.08997 * 113.61290 * 25.43637 * 15 13 12 37 37 H 1.08995 * 109.47027 * 304.99808 * 18 16 15 38 38 H 1.09000 * 109.47360 * 65.00103 * 18 16 15 39 39 H 1.07996 * 125.96871 * 0.03705 * 20 19 18 40 40 H 1.07997 * 125.52443 * 179.80628 * 22 21 20 41 41 H 1.09000 * 113.61284 * 334.55497 * 24 13 12 42 42 H 1.09001 * 113.61734 * 105.45925 * 24 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2554 1.1010 0.0000 4 6 3.5522 0.7094 -0.0006 5 6 4.7536 1.6189 -0.0002 6 8 5.5400 1.3690 1.1664 7 14 4.1886 3.3942 0.0003 8 6 3.5780 -0.6887 0.0051 9 6 2.2678 -1.1182 -0.0005 10 6 1.8125 -2.5125 -0.0006 11 8 0.6255 -2.7649 -0.0915 12 7 2.7087 -3.5141 0.1000 13 6 2.2482 -4.8991 0.2262 14 1 1.2565 -5.0557 -0.1983 15 6 3.2856 -5.9374 -0.2324 16 6 2.8473 -6.7903 0.9698 17 1 2.0196 -7.4640 0.7486 18 6 4.0081 -7.4870 1.6826 19 7 3.4814 -8.3637 2.7316 20 6 3.7184 -9.6790 2.8765 21 7 3.0690 -10.0944 3.9337 22 6 2.4026 -9.0794 4.4825 23 7 2.6237 -7.9983 3.7819 24 6 2.4107 -5.4777 1.6417 25 1 -0.3634 -0.1026 1.0226 26 1 -0.3633 0.9368 -0.4225 27 1 -0.3633 -0.8343 -0.6000 28 1 1.9082 2.1236 0.0009 29 1 5.3535 1.4290 -0.8902 30 1 5.0689 1.5182 1.9977 31 1 3.3433 3.6578 1.1925 32 1 5.3643 4.3015 0.0001 33 1 4.4583 -1.3143 0.0108 34 1 3.6585 -3.3179 0.0888 35 1 3.0538 -6.3900 -1.1965 36 1 4.3148 -5.5845 -0.1671 37 1 4.5729 -8.0799 0.9633 38 1 4.6621 -6.7382 2.1295 39 1 4.3386 -10.2863 2.2340 40 1 1.7811 -9.1401 5.3637 41 1 3.2009 -4.9997 2.2207 42 1 1.4725 -5.5592 2.1905 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14644236_10803934.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:05:36 Heat of formation + Delta-G solvation = 108.488955 kcal Electronic energy + Delta-G solvation = -25819.788106 eV Core-core repulsion = 21998.606566 eV Total energy + Delta-G solvation = -3821.181540 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 318.148 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -42.97789 -42.57414 -40.99767 -39.28933 -37.81942 -35.57859 -34.37954 -33.64615 -32.11301 -30.99790 -29.08339 -28.33606 -26.90686 -25.85341 -25.02277 -23.40116 -22.87967 -22.19641 -21.32922 -21.06258 -20.26505 -18.88151 -18.39197 -17.81031 -17.30738 -16.92296 -16.83104 -16.59751 -16.17766 -15.92433 -15.77273 -15.54730 -15.48338 -15.10997 -14.99150 -14.59943 -14.41017 -14.01552 -13.87370 -13.64166 -13.50896 -13.30487 -13.30026 -13.14115 -12.95286 -12.40561 -12.34164 -12.06740 -11.79976 -11.54202 -11.05250 -10.91143 -10.71708 -10.61785 -10.49316 -10.14044 -9.71647 -9.28624 -4.96289 0.41961 0.69639 1.29932 1.31591 1.52988 1.54761 1.62276 1.98984 2.07360 2.28101 2.33563 3.09355 3.25899 3.40779 3.43768 3.45838 3.58807 3.69748 3.75197 3.83044 3.89224 3.95921 3.99444 4.10185 4.15463 4.26093 4.33212 4.39734 4.48803 4.55811 4.58681 4.63087 4.68447 4.74331 4.80510 4.98793 5.06549 5.14875 5.31554 5.42130 5.50690 5.64373 5.82921 5.86966 6.08944 6.41933 6.49687 7.14121 7.16316 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.064 3.936 2 N -0.404 5.404 3 C 0.028 3.972 4 C -0.206 4.206 5 C -0.037 4.037 6 O -0.532 6.532 7 Si 0.679 3.321 8 C -0.113 4.113 9 C -0.054 4.054 10 C 0.593 3.407 11 O -0.546 6.546 12 N -0.709 5.709 13 C 0.125 3.875 14 H 0.118 0.882 15 C -0.136 4.136 16 C -0.119 4.119 17 H 0.101 0.899 18 C 0.140 3.860 19 N -0.379 5.379 20 C 0.252 3.748 21 N -0.547 5.547 22 C 0.196 3.804 23 N -0.312 5.312 24 C -0.135 4.135 25 H 0.078 0.922 26 H 0.088 0.912 27 H 0.103 0.897 28 H 0.173 0.827 29 H 0.115 0.885 30 H 0.374 0.626 31 H -0.260 1.260 32 H -0.258 1.258 33 H 0.145 0.855 34 H 0.404 0.596 35 H 0.083 0.917 36 H 0.093 0.907 37 H 0.105 0.895 38 H 0.092 0.908 39 H 0.218 0.782 40 H 0.216 0.784 41 H 0.087 0.913 42 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.550 1.240 -4.076 4.534 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 N -0.076 5.076 3 C -0.109 4.109 4 C -0.213 4.213 5 C -0.148 4.148 6 O -0.338 6.338 7 Si 0.580 3.420 8 C -0.139 4.139 9 C -0.168 4.168 10 C 0.381 3.619 11 O -0.425 6.425 12 N -0.360 5.360 13 C 0.020 3.980 14 H 0.136 0.864 15 C -0.175 4.175 16 C -0.139 4.139 17 H 0.119 0.881 18 C 0.018 3.982 19 N -0.170 5.170 20 C -0.045 4.045 21 N -0.274 5.274 22 C -0.107 4.107 23 N -0.140 5.140 24 C -0.174 4.174 25 H 0.097 0.903 26 H 0.107 0.893 27 H 0.121 0.879 28 H 0.190 0.810 29 H 0.133 0.867 30 H 0.222 0.778 31 H -0.185 1.185 32 H -0.183 1.183 33 H 0.163 0.837 34 H 0.239 0.761 35 H 0.102 0.898 36 H 0.111 0.889 37 H 0.124 0.876 38 H 0.110 0.890 39 H 0.235 0.765 40 H 0.233 0.767 41 H 0.106 0.894 42 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges 0.459 2.073 -3.911 4.450 hybrid contribution 0.749 -0.426 0.965 1.294 sum 1.209 1.647 -2.947 3.586 Atomic orbital electron populations 1.22342 0.75481 1.05275 1.04531 1.43823 1.07039 1.04714 1.51981 1.21876 0.90113 0.91693 1.07176 1.19731 0.93673 0.94798 1.13075 1.24265 0.92522 1.07303 0.90682 1.86582 1.41263 1.90114 1.15835 0.95376 0.82770 0.75008 0.88830 1.21169 0.94229 0.94620 1.03877 1.20032 0.90296 0.87610 1.18828 1.17001 0.85626 0.83577 0.75679 1.90807 1.16340 1.84841 1.50518 1.45585 1.09684 1.05908 1.74802 1.22526 0.99616 0.78809 0.97034 0.86400 1.23378 0.99820 0.95928 0.98381 1.22621 0.98202 0.96454 0.96577 0.88103 1.21875 0.95748 0.93726 0.86846 1.50589 1.36056 1.08352 1.22028 1.26132 0.98262 0.83915 0.96183 1.70568 1.14536 1.32301 1.09994 1.26073 0.98767 0.85572 1.00240 1.78089 1.11762 1.23847 1.00288 1.23476 1.03082 0.94321 0.96518 0.90339 0.89348 0.87878 0.80959 0.86749 0.77811 1.18502 1.18276 0.83748 0.76056 0.89814 0.88865 0.87641 0.89016 0.76549 0.76742 0.89405 0.90409 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.05 10.48 59.85 0.63 0.58 16 2 N -0.40 -0.33 3.16 -120.23 -0.38 -0.71 16 3 C 0.03 -0.01 9.92 -16.91 -0.17 -0.18 16 4 C -0.21 0.00 5.44 -105.02 -0.57 -0.58 16 5 C -0.04 0.02 3.02 36.00 0.11 0.13 16 6 O -0.53 -0.54 12.88 -35.23 -0.45 -1.00 16 7 Si 0.68 -0.96 30.59 -169.99 -5.20 -6.16 16 8 C -0.11 -0.04 10.29 -39.12 -0.40 -0.45 16 9 C -0.05 -0.08 6.89 -81.98 -0.56 -0.65 16 10 C 0.59 1.32 7.77 -12.85 -0.10 1.22 16 11 O -0.55 -2.84 14.37 5.19 0.07 -2.77 16 12 N -0.71 0.60 5.35 -54.32 -0.29 0.31 16 13 C 0.12 -0.16 4.25 -67.12 -0.29 -0.44 16 14 H 0.12 0.08 7.44 -51.93 -0.39 -0.31 16 15 C -0.14 0.55 7.39 -25.92 -0.19 0.36 16 16 C -0.12 0.34 3.85 -89.80 -0.35 -0.01 16 17 H 0.10 -0.16 8.14 -51.93 -0.42 -0.58 16 18 C 0.14 -0.48 6.39 -4.04 -0.03 -0.51 16 19 N -0.38 0.00 3.69 -62.63 -0.23 -0.23 16 20 C 0.25 -0.04 12.63 -90.65 -1.14 -1.18 16 21 N -0.55 -1.59 11.19 -15.83 -0.18 -1.77 16 22 C 0.20 0.46 13.03 -91.81 -1.20 -0.74 16 23 N -0.31 -0.83 12.57 29.29 0.37 -0.46 16 24 C -0.14 0.14 7.43 -25.92 -0.19 -0.05 16 25 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 26 H 0.09 -0.30 8.12 -51.93 -0.42 -0.73 16 27 H 0.10 0.08 6.55 -51.93 -0.34 -0.26 16 28 H 0.17 -0.55 6.19 -52.49 -0.32 -0.87 16 29 H 0.11 -0.13 7.96 -51.93 -0.41 -0.54 16 30 H 0.37 -0.57 8.70 45.56 0.40 -0.17 16 31 H -0.26 -0.14 7.11 56.52 0.40 0.26 16 32 H -0.26 -0.55 7.11 56.52 0.40 -0.15 16 33 H 0.14 -0.20 7.45 -52.49 -0.39 -0.60 16 34 H 0.40 -1.26 7.61 -40.82 -0.31 -1.57 16 35 H 0.08 -0.35 8.14 -51.93 -0.42 -0.77 16 36 H 0.09 -0.51 8.07 -51.93 -0.42 -0.93 16 37 H 0.11 -0.66 8.09 -51.93 -0.42 -1.08 16 38 H 0.09 -0.34 7.84 -51.93 -0.41 -0.75 16 39 H 0.22 -1.00 8.06 -52.49 -0.42 -1.42 16 40 H 0.22 -0.13 8.06 -52.49 -0.42 -0.55 16 41 H 0.09 -0.09 7.90 -51.93 -0.41 -0.50 16 42 H 0.08 0.10 8.14 -51.93 -0.42 -0.32 16 LS Contribution 357.40 15.07 5.39 5.39 Total: 0.00 -11.31 357.40 -10.94 -22.24 By element: Atomic # 1 Polarization: -6.76 SS G_CDS: -5.58 Total: -12.34 kcal Atomic # 6 Polarization: 1.96 SS G_CDS: -4.45 Total: -2.49 kcal Atomic # 7 Polarization: -2.16 SS G_CDS: -0.71 Total: -2.87 kcal Atomic # 8 Polarization: -3.38 SS G_CDS: -0.38 Total: -3.76 kcal Atomic # 14 Polarization: -0.96 SS G_CDS: -5.20 Total: -6.16 kcal Total LS contribution 5.39 Total: 5.39 kcal Total: -11.31 -10.94 -22.24 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14644236_10803934.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 130.733 kcal (2) G-P(sol) polarization free energy of solvation -11.307 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 119.427 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.938 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.244 kcal (6) G-S(sol) free energy of system = (1) + (5) 108.489 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds