Wall clock time and date at job start Sun Mar 7 2021 00:05:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.37650 * 125.67991 * 2 1 4 4 C 1.46678 * 126.23306 * 0.02562 * 3 2 1 5 5 O 1.21694 * 119.99792 * 4.64564 * 4 3 2 6 6 N 1.34780 * 119.99490 * 184.64931 * 4 3 2 7 7 C 1.46497 * 119.99489 * 175.17718 * 6 4 3 8 8 H 1.09007 * 112.85119 * 335.91560 * 7 6 4 9 9 C 1.53777 * 113.61978 * 107.22484 * 7 6 4 10 10 C 1.53777 * 87.08140 * 139.97842 * 9 7 6 11 11 H 1.09000 * 113.68958 * 89.13309 * 10 9 7 12 12 C 1.53002 * 113.61575 * 220.01741 * 10 9 7 13 13 N 1.46497 * 109.47558 * 272.50268 * 12 10 9 14 14 C 1.34432 * 126.82622 * 124.99315 * 13 12 10 15 15 N 1.30830 * 108.07645 * 179.97438 * 14 13 12 16 16 C 1.33239 * 109.83206 * 0.02562 * 15 14 13 17 17 N 1.30718 * 108.94536 * 359.75697 * 16 15 14 18 18 C 1.53775 * 87.08165 * 334.56975 * 10 9 7 19 19 C 1.37871 * 107.52948 * 179.73682 * 3 2 1 20 20 C 1.39838 * 107.09046 * 0.22846 * 19 3 2 21 21 C 1.35447 * 107.85969 * 359.97438 * 20 19 3 22 22 C 1.50706 * 125.56270 * 180.02562 * 21 20 19 23 23 O 1.42901 * 109.46967 * 149.97667 * 22 21 20 24 24 Si 1.86298 * 109.46922 * 29.97808 * 22 21 20 25 25 H 1.09001 * 109.47322 * 95.78231 * 1 2 3 26 26 H 1.08995 * 109.47495 * 215.78843 * 1 2 3 27 27 H 1.09005 * 109.47079 * 335.78543 * 1 2 3 28 28 H 0.97000 * 120.00120 * 354.89454 * 6 4 3 29 29 H 1.08998 * 113.61816 * 254.52928 * 9 7 6 30 30 H 1.09000 * 113.61015 * 25.42667 * 9 7 6 31 31 H 1.09003 * 109.46927 * 32.49909 * 12 10 9 32 32 H 1.08994 * 109.47260 * 152.49670 * 12 10 9 33 33 H 1.07996 * 125.95849 * 0.02562 * 14 13 12 34 34 H 1.07998 * 125.52951 * 179.97438 * 16 15 14 35 35 H 1.09005 * 113.61526 * 270.88012 * 18 10 9 36 36 H 1.09005 * 113.69248 * 139.99467 * 18 10 9 37 37 H 1.07999 * 126.45634 * 180.19244 * 19 3 2 38 38 H 1.07999 * 126.07009 * 180.02562 * 20 19 3 39 39 H 1.08997 * 109.47314 * 269.97710 * 22 21 20 40 40 H 0.96693 * 113.99806 * 299.99625 * 23 22 21 41 41 H 1.48492 * 110.00470 * 58.68022 * 24 22 21 42 42 H 1.48500 * 110.00039 * 180.02562 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2678 1.1181 0.0000 4 6 1.8125 2.5124 0.0005 5 8 0.6250 2.7646 0.0864 6 7 2.7092 3.5141 -0.0942 7 6 2.2495 4.9011 -0.2001 8 1 1.2399 4.9828 -0.6032 9 6 2.4720 5.7235 1.0801 10 6 2.8747 6.8921 0.1653 11 1 2.0368 7.5201 -0.1374 12 6 4.0633 7.7000 0.6902 13 7 3.5803 8.7530 1.5868 14 6 3.9667 8.9706 2.8559 15 7 3.3039 10.0028 3.3108 16 6 2.4882 10.4684 2.3657 17 7 2.6251 9.7388 1.2897 18 6 3.2625 5.8354 -0.8824 19 6 3.5779 0.6886 0.0060 20 6 3.5521 -0.7095 0.0044 21 6 2.2554 -1.1010 -0.0019 22 6 1.7707 -2.5280 -0.0052 23 8 0.5099 -2.6042 0.6630 24 14 3.0075 -3.6059 0.8775 25 1 -0.3634 -0.1035 -1.0224 26 1 -0.3634 -0.8336 0.6009 27 1 -0.3633 0.9373 0.4215 28 1 3.6590 3.3171 -0.0880 29 1 1.5585 5.9065 1.6458 30 1 3.2882 5.3532 1.7004 31 1 4.7386 7.0403 1.2351 32 1 4.5942 8.1515 -0.1478 33 1 4.6975 8.3944 3.4040 34 1 1.8244 11.3139 2.4704 35 1 4.2949 5.4958 -0.7986 36 1 2.9880 6.1076 -1.9016 37 1 4.4583 1.3142 0.0106 38 1 4.4131 -1.3614 0.0083 39 1 1.6582 -2.8712 -1.0336 40 1 0.5351 -2.3136 1.5849 41 1 3.1937 -3.1289 2.2713 42 1 2.5415 -5.0159 0.8807 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14644236_10803936.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:05:39 Heat of formation + Delta-G solvation = 109.728862 kcal Electronic energy + Delta-G solvation = -25862.901531 eV Core-core repulsion = 22041.773757 eV Total energy + Delta-G solvation = -3821.127774 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 318.148 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -42.98792 -42.62815 -41.05811 -39.35501 -37.98849 -35.60636 -34.34841 -33.56761 -32.12174 -31.42793 -29.21651 -27.53815 -26.98030 -26.91879 -24.59102 -23.18694 -22.96239 -22.31579 -21.44472 -21.04439 -20.29368 -18.89080 -18.48133 -18.15055 -17.48516 -16.98355 -16.71622 -16.47250 -16.29632 -16.05407 -15.80473 -15.46422 -15.34768 -15.08442 -14.91112 -14.55624 -14.44609 -14.31846 -13.90688 -13.83170 -13.71835 -13.35340 -13.17413 -12.97010 -12.79750 -12.47454 -12.37573 -12.05735 -11.98379 -11.69869 -11.18865 -10.91903 -10.79672 -10.71603 -10.57688 -10.18628 -9.77092 -9.12926 -5.02700 0.36504 0.68844 1.06822 1.30508 1.48397 1.61859 1.69637 1.93030 2.06845 2.31726 2.33768 3.02361 3.16275 3.23968 3.30078 3.41036 3.49666 3.55840 3.68999 3.74654 3.92814 3.96661 4.00510 4.19614 4.28261 4.31921 4.35219 4.39647 4.40314 4.47291 4.54201 4.61913 4.74898 4.80268 4.82929 4.95106 5.05143 5.11774 5.29366 5.38566 5.49726 5.65434 5.82642 5.93934 6.08823 6.16372 6.40112 7.12170 7.15437 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.050 3.950 2 N -0.392 5.392 3 C -0.054 4.054 4 C 0.592 3.408 5 O -0.545 6.545 6 N -0.709 5.709 7 C 0.130 3.870 8 H 0.118 0.882 9 C -0.147 4.147 10 C -0.121 4.121 11 H 0.110 0.890 12 C 0.141 3.859 13 N -0.378 5.378 14 C 0.253 3.747 15 N -0.547 5.547 16 C 0.199 3.801 17 N -0.318 5.318 18 C -0.136 4.136 19 C -0.135 4.135 20 C -0.198 4.198 21 C 0.013 3.987 22 C -0.057 4.057 23 O -0.532 6.532 24 Si 0.719 3.281 25 H 0.074 0.926 26 H 0.100 0.900 27 H 0.104 0.896 28 H 0.404 0.596 29 H 0.074 0.926 30 H 0.088 0.912 31 H 0.103 0.897 32 H 0.093 0.907 33 H 0.218 0.782 34 H 0.217 0.783 35 H 0.093 0.907 36 H 0.084 0.916 37 H 0.147 0.853 38 H 0.154 0.846 39 H 0.124 0.876 40 H 0.378 0.622 41 H -0.257 1.257 42 H -0.254 1.254 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.604 -2.769 -1.527 7.323 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.090 4.090 2 N -0.064 5.064 3 C -0.169 4.169 4 C 0.380 3.620 5 O -0.424 6.424 6 N -0.360 5.360 7 C 0.025 3.975 8 H 0.136 0.864 9 C -0.186 4.186 10 C -0.140 4.140 11 H 0.128 0.872 12 C 0.019 3.981 13 N -0.169 5.169 14 C -0.044 4.044 15 N -0.274 5.274 16 C -0.104 4.104 17 N -0.145 5.145 18 C -0.174 4.174 19 C -0.162 4.162 20 C -0.221 4.221 21 C -0.105 4.105 22 C -0.166 4.166 23 O -0.338 6.338 24 Si 0.618 3.382 25 H 0.092 0.908 26 H 0.118 0.882 27 H 0.123 0.877 28 H 0.240 0.760 29 H 0.093 0.907 30 H 0.107 0.893 31 H 0.121 0.879 32 H 0.111 0.889 33 H 0.234 0.766 34 H 0.233 0.767 35 H 0.111 0.889 36 H 0.103 0.897 37 H 0.164 0.836 38 H 0.171 0.829 39 H 0.142 0.858 40 H 0.226 0.774 41 H -0.181 1.181 42 H -0.179 1.179 Dipole moment (debyes) X Y Z Total from point charges 4.934 -3.124 -1.789 6.108 hybrid contribution -0.294 0.310 0.620 0.753 sum 4.640 -2.814 -1.170 5.551 Atomic orbital electron populations 1.22637 0.75600 1.06353 1.04428 1.43776 1.07009 1.04074 1.51528 1.20043 0.90582 0.87468 1.18758 1.17040 0.85604 0.83613 0.75696 1.90794 1.16397 1.84781 1.50420 1.45587 1.09667 1.05701 1.75033 1.22452 0.99832 0.78469 0.96768 0.86436 1.23589 1.02748 0.95116 0.97174 1.22702 0.98747 0.95085 0.97508 0.87162 1.21868 0.96125 0.86562 0.93544 1.50559 1.30874 1.23905 1.11534 1.26097 0.98689 0.95377 0.84214 1.70562 1.12097 1.12306 1.32432 1.26060 0.98136 0.99869 0.86344 1.78038 1.09777 1.02575 1.24147 1.23378 0.99934 0.94782 0.99348 1.21278 0.94279 0.95243 1.05373 1.20547 0.94928 0.95221 1.11441 1.21099 0.91107 0.89140 1.09134 1.24947 0.93093 0.94540 1.03972 1.86593 1.29758 1.88339 1.29145 0.94403 0.84823 0.77377 0.81647 0.90754 0.88189 0.87731 0.76042 0.90726 0.89343 0.87855 0.88859 0.76618 0.76667 0.88871 0.89724 0.83576 0.82872 0.85839 0.77373 1.18118 1.17907 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 0.07 10.31 59.85 0.62 0.68 16 2 N -0.39 -0.71 3.16 -115.62 -0.37 -1.08 16 3 C -0.05 -0.09 6.89 -81.98 -0.56 -0.65 16 4 C 0.59 1.29 7.77 -12.85 -0.10 1.19 16 5 O -0.55 -3.03 14.18 5.19 0.07 -2.95 16 6 N -0.71 1.00 5.34 -54.33 -0.29 0.71 16 7 C 0.13 -0.21 4.21 -67.12 -0.28 -0.49 16 8 H 0.12 0.07 7.53 -51.92 -0.39 -0.32 16 9 C -0.15 0.30 7.43 -25.92 -0.19 0.11 16 10 C -0.12 0.34 3.88 -89.81 -0.35 -0.01 16 11 H 0.11 -0.06 8.01 -51.93 -0.42 -0.48 16 12 C 0.14 -0.50 6.39 -4.04 -0.03 -0.52 16 13 N -0.38 0.00 3.69 -62.63 -0.23 -0.23 16 14 C 0.25 -0.03 12.63 -90.65 -1.14 -1.17 16 15 N -0.55 -1.60 11.19 -15.83 -0.18 -1.77 16 16 C 0.20 0.46 13.03 -91.81 -1.20 -0.74 16 17 N -0.32 -0.86 12.46 29.29 0.36 -0.50 16 18 C -0.14 0.55 7.39 -25.92 -0.19 0.36 16 19 C -0.14 0.09 10.35 -39.12 -0.41 -0.32 16 20 C -0.20 0.17 9.37 -39.98 -0.37 -0.20 16 21 C 0.01 0.00 6.15 -81.95 -0.50 -0.50 16 22 C -0.06 0.06 2.99 36.01 0.11 0.17 16 23 O -0.53 0.03 10.11 -35.23 -0.36 -0.32 16 24 Si 0.72 -1.53 31.10 -169.99 -5.29 -6.82 16 25 H 0.07 0.10 8.14 -51.93 -0.42 -0.32 16 26 H 0.10 0.00 5.24 -51.93 -0.27 -0.28 16 27 H 0.10 0.29 5.92 -51.93 -0.31 -0.02 16 28 H 0.40 -1.69 7.63 -40.82 -0.31 -2.00 16 29 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 30 H 0.09 -0.29 7.90 -51.93 -0.41 -0.70 16 31 H 0.10 -0.66 7.79 -51.93 -0.40 -1.06 16 32 H 0.09 -0.37 8.14 -51.93 -0.42 -0.79 16 33 H 0.22 -0.98 8.06 -52.49 -0.42 -1.40 16 34 H 0.22 -0.16 8.06 -52.49 -0.42 -0.58 16 35 H 0.09 -0.56 8.08 -51.93 -0.42 -0.98 16 36 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 37 H 0.15 -0.55 7.45 -52.49 -0.39 -0.94 16 38 H 0.15 -0.58 6.85 -52.49 -0.36 -0.93 16 39 H 0.12 -0.21 7.96 -51.93 -0.41 -0.63 16 40 H 0.38 -0.90 8.29 45.56 0.38 -0.52 16 41 H -0.26 -0.13 7.11 56.52 0.40 0.28 16 42 H -0.25 -0.25 7.11 56.52 0.40 0.15 16 LS Contribution 351.55 15.07 5.30 5.30 Total: 0.00 -11.39 351.55 -11.03 -22.42 By element: Atomic # 1 Polarization: -7.22 SS G_CDS: -5.45 Total: -12.68 kcal Atomic # 6 Polarization: 2.52 SS G_CDS: -4.61 Total: -2.08 kcal Atomic # 7 Polarization: -2.17 SS G_CDS: -0.70 Total: -2.87 kcal Atomic # 8 Polarization: -2.99 SS G_CDS: -0.28 Total: -3.27 kcal Atomic # 14 Polarization: -1.53 SS G_CDS: -5.29 Total: -6.82 kcal Total LS contribution 5.30 Total: 5.30 kcal Total: -11.39 -11.03 -22.42 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14644236_10803936.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 132.150 kcal (2) G-P(sol) polarization free energy of solvation -11.394 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 120.756 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.027 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.421 kcal (6) G-S(sol) free energy of system = (1) + (5) 109.729 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds