Wall clock time and date at job start Sun Mar 7 2021 00:05:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86304 * 109.46763 * 2 1 4 4 C 1.50698 * 109.47429 * 240.00263 * 2 1 3 5 5 C 1.36455 * 120.29631 * 239.93756 * 4 2 1 6 6 C 1.40089 * 119.25431 * 179.97438 * 5 4 2 7 7 C 1.40854 * 132.86532 * 180.02562 * 6 5 4 8 8 C 1.46571 * 126.57604 * 0.02562 * 7 6 5 9 9 O 1.21720 * 120.00276 * 359.97438 * 8 7 6 10 10 N 1.34779 * 119.99760 * 179.97438 * 8 7 6 11 11 C 1.46499 * 119.99814 * 179.97438 * 10 8 7 12 12 H 1.08999 * 112.85080 * 334.66685 * 11 10 8 13 13 C 1.53781 * 113.61142 * 105.86449 * 11 10 8 14 14 C 1.53958 * 87.01958 * 139.94950 * 13 11 10 15 15 H 1.09005 * 113.60999 * 89.19586 * 14 13 11 16 16 C 1.52995 * 113.66972 * 220.06804 * 14 13 11 17 17 N 1.46506 * 109.47065 * 272.56111 * 16 14 13 18 18 C 1.34429 * 126.82465 * 124.70868 * 17 16 14 19 19 N 1.30829 * 108.07696 * 179.89531 * 18 17 16 20 20 C 1.33246 * 109.83054 * 0.37779 * 19 18 17 21 21 N 1.30712 * 108.94636 * 359.76967 * 20 19 18 22 22 C 1.53777 * 113.61405 * 203.47255 * 11 10 8 23 23 C 1.40554 * 106.84206 * 180.02562 * 7 6 5 24 24 N 1.30742 * 108.74345 * 0.24591 * 23 7 6 25 25 N 1.36583 * 120.23462 * 0.05232 * 6 5 4 26 26 C 1.36248 * 120.07620 * 359.97438 * 25 6 5 27 27 C 1.35193 * 120.70487 * 0.02562 * 26 25 6 28 28 H 0.96699 * 114.00343 * 299.99694 * 1 2 3 29 29 H 1.09001 * 109.47532 * 119.99773 * 2 1 3 30 30 H 1.48500 * 109.99731 * 299.99837 * 3 2 1 31 31 H 1.48491 * 109.99985 * 61.31906 * 3 2 1 32 32 H 1.07994 * 120.36795 * 0.05890 * 5 4 2 33 33 H 0.97005 * 120.00034 * 0.02562 * 10 8 7 34 34 H 1.09003 * 113.61553 * 254.52818 * 13 11 10 35 35 H 1.09001 * 113.61771 * 25.43606 * 13 11 10 36 36 H 1.08999 * 109.47191 * 32.55708 * 16 14 13 37 37 H 1.09001 * 109.47328 * 152.56493 * 16 14 13 38 38 H 1.08000 * 125.95587 * 0.04080 * 18 17 16 39 39 H 1.08001 * 125.52462 * 179.72878 * 20 19 18 40 40 H 1.08999 * 113.61538 * 334.56724 * 22 11 10 41 41 H 1.09000 * 113.61823 * 105.39038 * 22 11 10 42 42 H 1.08002 * 125.62408 * 179.97438 * 23 7 6 43 43 H 1.07992 * 119.64618 * 179.97438 * 26 25 6 44 44 H 1.08000 * 119.83253 * 180.02562 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7103 -1.2305 5 6 2.7173 -1.8195 -1.1123 6 6 3.1718 -2.4631 -2.2706 7 6 3.9762 -3.5998 -2.4823 8 6 4.5775 -4.4488 -1.4499 9 8 4.3989 -4.1949 -0.2730 10 7 5.3283 -5.5107 -1.8038 11 6 5.9298 -6.3590 -0.7719 12 1 6.0857 -5.8334 0.1703 13 6 5.2327 -7.7201 -0.6100 14 6 6.6369 -8.3290 -0.4436 15 1 6.9867 -8.3440 0.5887 16 6 6.8100 -9.6755 -1.1492 17 7 6.3887 -10.7546 -0.2523 18 6 5.4686 -11.7010 -0.5070 19 7 5.3830 -12.4769 0.5428 20 6 6.2232 -12.0546 1.4868 21 7 6.8615 -11.0021 1.0469 22 6 7.1658 -7.1352 -1.2559 23 6 4.0917 -3.7636 -3.8735 24 7 3.4225 -2.8093 -4.4659 25 7 2.8312 -1.9826 -3.5030 26 6 2.0464 -0.8741 -3.6106 27 6 1.5965 -0.2369 -2.5064 28 1 -0.3934 0.4416 0.7650 29 1 1.7924 -0.5138 0.8900 30 1 1.5613 2.4679 -1.2085 31 1 1.5878 2.4586 1.2242 32 1 2.9848 -2.1977 -0.1368 33 1 5.4710 -5.7128 -2.7417 34 1 4.6160 -7.7910 0.2861 35 1 4.7152 -8.0553 -1.5088 36 1 6.1991 -9.6939 -2.0517 37 1 7.8576 -9.8135 -1.4166 38 1 4.9011 -11.8042 -1.4201 39 1 6.3548 -12.5078 2.4582 40 1 7.1778 -7.3103 -2.3317 41 1 8.1077 -6.7339 -0.8819 42 1 4.6457 -4.5460 -4.3710 43 1 1.7817 -0.4999 -4.5885 44 1 0.9749 0.6404 -2.6082 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14644236_11618758.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:05:42 Heat of formation + Delta-G solvation = 166.285195 kcal Electronic energy + Delta-G solvation = -29815.177114 eV Core-core repulsion = 25546.397474 eV Total energy + Delta-G solvation = -4268.779640 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 355.143 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -43.28561 -42.94804 -41.03620 -39.49239 -39.03523 -37.43439 -35.40803 -34.31383 -33.84919 -32.16312 -32.08719 -30.44772 -29.02649 -27.34121 -26.89014 -25.33797 -24.47188 -23.46479 -22.96352 -22.92382 -22.14147 -21.33864 -20.56170 -19.17783 -18.59230 -18.45178 -17.97424 -17.55418 -17.21868 -16.90383 -16.81994 -16.54241 -16.33630 -15.91247 -15.78458 -15.64829 -15.53614 -15.11903 -14.95049 -14.52179 -14.44303 -14.16152 -14.08944 -13.78608 -13.63522 -13.30453 -13.22771 -13.04391 -12.77607 -12.72056 -12.40256 -12.12945 -11.98446 -11.93738 -11.62186 -11.56962 -10.88986 -10.87433 -10.77774 -10.67935 -10.52841 -10.30345 -10.01228 -8.76175 -5.09098 -0.56873 -0.11392 0.72383 1.00315 1.04686 1.09511 1.34835 1.45941 1.76391 2.03720 2.10066 2.23984 2.56003 2.94045 3.10370 3.24019 3.31821 3.37032 3.41909 3.44635 3.51472 3.66865 3.69091 3.81134 3.84537 3.95244 3.99329 4.04568 4.14588 4.23361 4.24648 4.31521 4.39013 4.47672 4.53010 4.61758 4.69781 4.78094 4.85118 4.90990 5.10142 5.14164 5.18210 5.26380 5.32931 5.53117 5.55815 5.65187 5.86242 6.24223 6.31319 6.58653 7.18791 7.37732 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.532 6.532 2 C -0.077 4.077 3 Si 0.692 3.308 4 C -0.024 4.024 5 C -0.093 4.093 6 C 0.170 3.830 7 C -0.318 4.318 8 C 0.603 3.397 9 O -0.549 6.549 10 N -0.720 5.720 11 C 0.131 3.869 12 H 0.118 0.882 13 C -0.148 4.148 14 C -0.121 4.121 15 H 0.110 0.890 16 C 0.141 3.859 17 N -0.377 5.377 18 C 0.253 3.747 19 N -0.547 5.547 20 C 0.198 3.802 21 N -0.317 5.317 22 C -0.136 4.136 23 C 0.119 3.881 24 N -0.313 5.313 25 N -0.265 5.265 26 C 0.115 3.885 27 C -0.144 4.144 28 H 0.385 0.615 29 H 0.084 0.916 30 H -0.248 1.248 31 H -0.251 1.251 32 H 0.165 0.835 33 H 0.398 0.602 34 H 0.073 0.927 35 H 0.087 0.913 36 H 0.103 0.897 37 H 0.093 0.907 38 H 0.217 0.783 39 H 0.217 0.783 40 H 0.091 0.909 41 H 0.083 0.917 42 H 0.198 0.802 43 H 0.177 0.823 44 H 0.160 0.840 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.787 3.160 -3.232 4.861 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.340 6.340 2 C -0.186 4.186 3 Si 0.590 3.410 4 C -0.030 4.030 5 C -0.112 4.112 6 C 0.049 3.951 7 C -0.333 4.333 8 C 0.392 3.608 9 O -0.427 6.427 10 N -0.370 5.370 11 C 0.026 3.974 12 H 0.136 0.864 13 C -0.187 4.187 14 C -0.141 4.141 15 H 0.128 0.872 16 C 0.019 3.981 17 N -0.168 5.168 18 C -0.044 4.044 19 N -0.274 5.274 20 C -0.105 4.105 21 N -0.145 5.145 22 C -0.175 4.175 23 C -0.062 4.062 24 N -0.134 5.134 25 N -0.029 5.029 26 C -0.011 4.011 27 C -0.165 4.165 28 H 0.234 0.766 29 H 0.102 0.898 30 H -0.171 1.171 31 H -0.175 1.175 32 H 0.182 0.818 33 H 0.233 0.767 34 H 0.092 0.908 35 H 0.105 0.895 36 H 0.121 0.879 37 H 0.111 0.889 38 H 0.233 0.767 39 H 0.233 0.767 40 H 0.109 0.891 41 H 0.102 0.898 42 H 0.214 0.786 43 H 0.195 0.805 44 H 0.177 0.823 Dipole moment (debyes) X Y Z Total from point charges 1.600 4.460 -3.800 6.074 hybrid contribution -0.911 -0.665 0.435 1.209 sum 0.689 3.796 -3.365 5.119 Atomic orbital electron populations 1.86575 1.16955 1.80353 1.50123 1.24730 0.85052 1.11311 0.97490 0.94457 0.91709 0.73439 0.81353 1.19357 0.95343 0.94157 0.94145 1.20661 0.98484 0.93847 0.98253 1.19232 0.95616 0.94186 0.86089 1.19586 1.16349 1.03804 0.93538 1.16866 0.77320 0.79270 0.87302 1.90784 1.61317 1.72010 1.18599 1.45660 1.52715 1.29007 1.09649 1.22376 0.92713 0.89164 0.93131 0.86431 1.23624 0.96163 0.95947 1.02966 1.22739 0.98012 0.91856 1.01492 0.87214 1.21877 1.02263 0.83659 0.90313 1.50566 1.30249 1.23812 1.12187 1.26089 0.91984 0.86599 0.99729 1.70562 1.25685 1.29870 1.01319 1.26054 0.92063 0.92170 1.00168 1.78035 1.23747 1.19909 0.92811 1.23365 0.98588 0.94890 1.00672 1.24036 0.94472 0.95734 0.91942 1.77633 1.18468 1.06436 1.10825 1.46086 1.31934 1.19033 1.05798 1.21571 0.92349 0.85304 1.01848 1.20799 1.02750 1.02540 0.90417 0.76617 0.89772 1.17140 1.17548 0.81773 0.76708 0.90792 0.89494 0.87914 0.88912 0.76651 0.76686 0.89053 0.89824 0.78556 0.80542 0.82280 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.22 12.76 -35.23 -0.45 -0.23 16 2 C -0.08 0.11 2.81 36.00 0.10 0.21 16 3 Si 0.69 -1.62 31.97 -169.99 -5.43 -7.05 16 4 C -0.02 0.00 4.53 -104.55 -0.47 -0.48 16 5 C -0.09 -0.15 9.35 -39.53 -0.37 -0.52 16 6 C 0.17 0.46 6.76 -84.07 -0.57 -0.11 16 7 C -0.32 -0.62 6.17 -104.68 -0.65 -1.27 16 8 C 0.60 1.39 7.78 -12.90 -0.10 1.28 16 9 O -0.55 -3.09 15.32 5.17 0.08 -3.01 16 10 N -0.72 0.96 5.35 -54.36 -0.29 0.67 16 11 C 0.13 -0.19 4.21 -67.12 -0.28 -0.47 16 12 H 0.12 0.09 7.50 -51.93 -0.39 -0.30 16 13 C -0.15 0.26 7.45 -25.83 -0.19 0.07 16 14 C -0.12 0.32 3.88 -89.72 -0.35 -0.03 16 15 H 0.11 -0.04 8.00 -51.93 -0.42 -0.46 16 16 C 0.14 -0.46 6.39 -4.04 -0.03 -0.49 16 17 N -0.38 -0.08 3.69 -62.63 -0.23 -0.31 16 18 C 0.25 0.03 12.63 -90.66 -1.14 -1.11 16 19 N -0.55 -1.70 11.19 -15.83 -0.18 -1.88 16 20 C 0.20 0.49 13.03 -91.81 -1.20 -0.71 16 21 N -0.32 -0.91 12.45 29.29 0.36 -0.55 16 22 C -0.14 0.53 7.39 -25.92 -0.19 0.34 16 23 C 0.12 0.02 11.44 -17.14 -0.20 -0.18 16 24 N -0.31 -0.75 12.57 30.75 0.39 -0.36 16 25 N -0.26 -0.58 3.86 -10.54 -0.04 -0.62 16 26 C 0.12 -0.02 11.18 -16.67 -0.19 -0.21 16 27 C -0.14 0.08 8.67 -39.95 -0.35 -0.26 16 28 H 0.39 -1.66 8.74 45.56 0.40 -1.26 16 29 H 0.08 -0.21 7.71 -51.93 -0.40 -0.61 16 30 H -0.25 0.03 7.07 56.52 0.40 0.43 16 31 H -0.25 0.09 7.11 56.52 0.40 0.50 16 32 H 0.16 0.27 7.01 -52.49 -0.37 -0.10 16 33 H 0.40 -1.73 7.63 -40.82 -0.31 -2.04 16 34 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 35 H 0.09 -0.25 7.90 -51.93 -0.41 -0.66 16 36 H 0.10 -0.62 7.80 -51.93 -0.40 -1.03 16 37 H 0.09 -0.34 8.14 -51.93 -0.42 -0.77 16 38 H 0.22 -0.92 8.06 -52.49 -0.42 -1.34 16 39 H 0.22 -0.13 8.06 -52.49 -0.42 -0.55 16 40 H 0.09 -0.53 8.07 -51.93 -0.42 -0.95 16 41 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 42 H 0.20 -0.86 7.46 -52.49 -0.39 -1.26 16 43 H 0.18 -0.52 8.06 -52.49 -0.42 -0.95 16 44 H 0.16 -0.33 7.53 -52.49 -0.39 -0.73 16 LS Contribution 380.94 15.07 5.74 5.74 Total: 0.00 -13.25 380.94 -11.46 -24.71 By element: Atomic # 1 Polarization: -7.94 SS G_CDS: -5.24 Total: -13.19 kcal Atomic # 6 Polarization: 2.23 SS G_CDS: -6.17 Total: -3.93 kcal Atomic # 7 Polarization: -3.05 SS G_CDS: 0.01 Total: -3.04 kcal Atomic # 8 Polarization: -2.87 SS G_CDS: -0.37 Total: -3.24 kcal Atomic # 14 Polarization: -1.62 SS G_CDS: -5.43 Total: -7.05 kcal Total LS contribution 5.74 Total: 5.74 kcal Total: -13.25 -11.46 -24.71 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14644236_11618758.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 190.995 kcal (2) G-P(sol) polarization free energy of solvation -13.248 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 177.747 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.462 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.709 kcal (6) G-S(sol) free energy of system = (1) + (5) 166.285 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.14 seconds