Wall clock time and date at job start Sun Mar 7 2021 00:05:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.35455 * 125.56218 * 2 1 4 4 C 1.50701 * 126.06921 * 359.97438 * 3 2 1 5 5 O 1.42901 * 109.46802 * 244.44197 * 4 3 2 6 6 Si 1.86295 * 109.47184 * 124.44111 * 4 3 2 7 7 C 1.39841 * 107.86334 * 179.70742 * 3 2 1 8 8 C 1.50700 * 126.45614 * 180.30219 * 7 3 2 9 9 C 1.37870 * 107.08331 * 0.41610 * 7 3 2 10 10 C 1.46680 * 126.23132 * 179.84955 * 9 7 3 11 11 O 1.21697 * 120.00017 * 359.71570 * 10 9 7 12 12 N 1.34774 * 120.00076 * 179.71553 * 10 9 7 13 13 C 1.46496 * 120.00169 * 180.02562 * 12 10 9 14 14 H 1.09005 * 112.85005 * 336.19268 * 13 12 10 15 15 C 1.53785 * 113.61842 * 107.50019 * 13 12 10 16 16 C 1.53784 * 87.08162 * 139.98082 * 15 13 12 17 17 H 1.08995 * 113.68471 * 89.13137 * 16 15 13 18 18 C 1.52997 * 113.61064 * 220.02155 * 16 15 13 19 19 N 1.46509 * 109.47098 * 272.49409 * 18 16 15 20 20 C 1.34426 * 126.82047 * 125.00017 * 19 18 16 21 21 N 1.30832 * 108.07781 * 179.97438 * 20 19 18 22 22 C 1.33242 * 109.82736 * 0.02562 * 21 20 19 23 23 N 1.30710 * 108.94327 * 359.75042 * 22 21 20 24 24 C 1.53779 * 113.61422 * 204.99963 * 13 12 10 25 25 N 1.35532 * 125.56619 * 179.97438 * 2 1 3 26 26 H 1.09003 * 109.47393 * 275.34382 * 1 2 3 27 27 H 1.09005 * 109.47439 * 35.34489 * 1 2 3 28 28 H 1.08997 * 109.47224 * 155.34795 * 1 2 3 29 29 H 1.09003 * 109.46954 * 4.43332 * 4 3 2 30 30 H 0.96703 * 114.00260 * 299.99573 * 5 4 3 31 31 H 1.48504 * 109.99981 * 184.11298 * 6 4 3 32 32 H 1.48499 * 109.99928 * 305.42828 * 6 4 3 33 33 H 1.09003 * 109.46966 * 270.15936 * 8 7 3 34 34 H 1.08993 * 109.47309 * 30.15496 * 8 7 3 35 35 H 1.09001 * 109.47013 * 150.16102 * 8 7 3 36 36 H 0.96998 * 119.99779 * 359.97438 * 12 10 9 37 37 H 1.09005 * 113.61129 * 25.43051 * 15 13 12 38 38 H 1.08997 * 113.61572 * 254.53232 * 15 13 12 39 39 H 1.09000 * 109.47457 * 32.49936 * 18 16 15 40 40 H 1.09004 * 109.47093 * 152.50123 * 18 16 15 41 41 H 1.08004 * 125.96178 * 0.02562 * 20 19 18 42 42 H 1.08001 * 125.52744 * 180.02562 * 22 21 20 43 43 H 1.09001 * 113.61752 * 105.46747 * 24 13 12 44 44 H 1.08999 * 113.69170 * 334.57535 * 24 13 12 45 45 H 0.97001 * 125.67838 * 0.05021 * 25 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2947 1.1019 0.0000 4 6 1.8198 2.5321 -0.0005 5 8 2.2219 3.1670 -1.2160 6 14 2.5664 3.4349 1.4480 7 6 3.6270 0.6768 0.0068 8 6 4.8485 1.5593 0.0156 9 6 3.6122 -0.7018 0.0013 10 6 4.7860 -1.5814 0.0021 11 8 5.9049 -1.1029 0.0030 12 7 4.6254 -2.9195 0.0020 13 6 5.7977 -3.7980 0.0035 14 1 6.6880 -3.3165 -0.4010 15 6 6.0350 -4.5065 1.3476 16 6 6.4064 -5.7571 0.5333 17 1 7.4637 -5.8130 0.2744 18 6 5.8717 -7.0595 1.1323 19 7 6.8343 -7.5805 2.1061 20 6 6.5926 -7.8890 3.3920 21 7 7.7077 -8.3216 3.9222 22 6 8.6788 -8.3032 3.0101 23 7 8.1916 -7.8617 1.8804 24 6 5.5256 -5.1894 -0.5923 25 7 2.2953 -1.1025 0.0005 26 1 -0.3634 0.0957 1.0232 27 1 -0.3634 0.8383 -0.5945 28 1 -0.3633 -0.9340 -0.4286 29 1 0.7329 2.5541 0.0785 30 1 3.1790 3.1841 -1.3530 31 1 2.0291 4.8177 1.5163 32 1 2.2647 2.7100 2.7084 33 1 5.1472 1.7765 -1.0099 34 1 4.6197 2.4912 0.5324 35 1 5.6621 1.0484 0.5306 36 1 3.7335 -3.3009 0.0017 37 1 5.1303 -4.6264 1.9437 38 1 6.8672 -4.0937 1.9178 39 1 4.9204 -6.8675 1.6286 40 1 5.7259 -7.7917 0.3381 41 1 5.6433 -7.7967 3.8987 42 1 9.7015 -8.6082 3.1759 43 1 5.9465 -5.3280 -1.5881 44 1 4.4820 -5.4972 -0.5273 45 1 1.9834 -2.0210 0.0002 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14644236_12297754.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:05:45 Heat of formation + Delta-G solvation = 89.583312 kcal Electronic energy + Delta-G solvation = -27919.148457 eV Core-core repulsion = 23941.609487 eV Total energy + Delta-G solvation = -3977.538970 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.164 amu Computer time = 1.13 seconds Orbital eigenvalues (eV) -42.99902 -42.67477 -40.98752 -39.36044 -37.73149 -35.56315 -34.23620 -33.71628 -32.76526 -32.17485 -29.27715 -29.21493 -27.46264 -26.78123 -26.45359 -24.41230 -22.95528 -22.77202 -22.01171 -21.09349 -20.67618 -20.06267 -19.23237 -18.39503 -17.68369 -17.35839 -16.79876 -16.69302 -16.49024 -16.17646 -15.97502 -15.66809 -15.38173 -15.20223 -15.06795 -14.81684 -14.45875 -14.31290 -14.09924 -13.97218 -13.70248 -13.63814 -13.50768 -13.26866 -13.17386 -13.13147 -12.73841 -12.61707 -12.42877 -12.36363 -12.02374 -11.89886 -11.56164 -11.07669 -10.97677 -10.80406 -10.54445 -10.53221 -10.18819 -9.56656 -8.99968 -4.93046 0.35374 0.69209 1.21801 1.44089 1.53349 1.72776 1.92892 1.99544 2.00678 2.13274 2.26030 3.34529 3.43790 3.45930 3.52842 3.66821 3.71002 3.79823 3.84774 3.87641 3.99758 4.12046 4.13870 4.15466 4.33429 4.39796 4.46794 4.49214 4.56474 4.64370 4.69119 4.72005 4.75968 4.87879 4.91101 4.95149 4.99529 5.05471 5.13572 5.15743 5.30089 5.33402 5.44582 5.49213 5.69098 5.87490 5.94439 6.36676 6.53859 6.77506 7.10377 7.12341 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.097 4.097 2 C 0.082 3.918 3 C -0.228 4.228 4 C -0.025 4.025 5 O -0.556 6.556 6 Si 0.730 3.270 7 C -0.076 4.076 8 C -0.095 4.095 9 C -0.075 4.075 10 C 0.589 3.411 11 O -0.563 6.563 12 N -0.706 5.706 13 C 0.120 3.880 14 H 0.091 0.909 15 C -0.141 4.141 16 C -0.115 4.115 17 H 0.081 0.919 18 C 0.136 3.864 19 N -0.378 5.378 20 C 0.256 3.744 21 N -0.586 5.586 22 C 0.186 3.814 23 N -0.350 5.350 24 C -0.116 4.116 25 N -0.520 5.520 26 H 0.088 0.912 27 H 0.086 0.914 28 H 0.090 0.910 29 H 0.113 0.887 30 H 0.388 0.612 31 H -0.290 1.290 32 H -0.293 1.293 33 H 0.086 0.914 34 H 0.084 0.916 35 H 0.071 0.929 36 H 0.411 0.589 37 H 0.109 0.891 38 H 0.045 0.955 39 H 0.142 0.858 40 H 0.101 0.899 41 H 0.259 0.741 42 H 0.231 0.769 43 H 0.082 0.918 44 H 0.123 0.877 45 H 0.431 0.569 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.182 -3.734 -1.341 8.205 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.155 4.155 2 C -0.037 4.037 3 C -0.234 4.234 4 C -0.137 4.137 5 O -0.363 6.363 6 Si 0.637 3.363 7 C -0.084 4.084 8 C -0.151 4.151 9 C -0.187 4.187 10 C 0.378 3.622 11 O -0.442 6.442 12 N -0.357 5.357 13 C 0.015 3.985 14 H 0.109 0.891 15 C -0.180 4.180 16 C -0.135 4.135 17 H 0.100 0.900 18 C 0.016 3.984 19 N -0.168 5.168 20 C -0.040 4.040 21 N -0.314 5.314 22 C -0.117 4.117 23 N -0.179 5.179 24 C -0.155 4.155 25 N -0.119 5.119 26 H 0.107 0.893 27 H 0.105 0.895 28 H 0.109 0.891 29 H 0.131 0.869 30 H 0.237 0.763 31 H -0.217 1.217 32 H -0.220 1.220 33 H 0.104 0.896 34 H 0.102 0.898 35 H 0.090 0.910 36 H 0.248 0.752 37 H 0.127 0.873 38 H 0.064 0.936 39 H 0.160 0.840 40 H 0.119 0.881 41 H 0.274 0.726 42 H 0.247 0.753 43 H 0.100 0.900 44 H 0.141 0.859 45 H 0.272 0.728 Dipole moment (debyes) X Y Z Total from point charges -6.764 -3.118 -1.050 7.522 hybrid contribution -0.691 -0.869 0.000 1.110 sum -7.455 -3.987 -1.049 8.519 Atomic orbital electron populations 1.20609 0.85577 1.05072 1.04207 1.20688 0.94718 0.85443 1.02884 1.19598 0.92719 0.95595 1.15509 1.24235 1.02619 0.90917 0.95922 1.86447 1.29651 1.79695 1.40530 0.93814 0.91709 0.76085 0.74720 1.19998 0.95123 0.91913 1.01395 1.20518 0.93881 0.97377 1.03293 1.19953 0.83487 0.93873 1.21410 1.17200 0.87097 0.82317 0.75602 1.90824 1.25656 1.75806 1.51934 1.45677 1.10286 1.04684 1.75034 1.22426 0.89197 0.89332 0.97524 0.89091 1.23572 1.02203 0.95431 0.96814 1.22522 1.00606 0.92771 0.97614 0.90045 1.22217 0.89667 0.95034 0.91528 1.50745 1.07577 1.47642 1.10856 1.26871 1.00489 0.93581 0.83032 1.70542 1.00223 1.26093 1.34531 1.26442 1.01412 0.97723 0.86092 1.77952 0.91331 1.23963 1.24642 1.23318 1.02033 0.91851 0.98281 1.41722 1.04313 1.09056 1.56792 0.89348 0.89524 0.89088 0.86936 0.76310 1.21717 1.22001 0.89596 0.89793 0.90978 0.75217 0.87313 0.93561 0.84015 0.88078 0.72587 0.75305 0.89956 0.85867 0.72810 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.75 9.90 71.23 0.70 1.46 16 2 C 0.08 -0.20 7.13 41.34 0.29 0.10 16 3 C -0.23 -0.30 4.65 -20.12 -0.09 -0.39 16 4 C -0.03 -0.03 2.86 71.24 0.20 0.18 16 5 O -0.56 -1.35 12.88 -148.98 -1.92 -3.27 16 6 Si 0.73 1.30 29.34 68.60 2.01 3.31 16 7 C -0.08 -0.21 5.82 -19.56 -0.11 -0.32 16 8 C -0.09 -0.07 8.60 71.24 0.61 0.54 16 9 C -0.08 -0.09 7.06 40.35 0.28 0.19 16 10 C 0.59 1.77 7.79 86.45 0.67 2.45 16 11 O -0.56 -6.26 14.40 -4.34 -0.06 -6.32 16 12 N -0.71 3.64 5.35 -443.99 -2.38 1.27 16 13 C 0.12 -0.50 4.24 45.52 0.19 -0.30 16 14 H 0.09 0.22 7.46 -2.38 -0.02 0.21 16 15 C -0.14 0.74 7.43 31.12 0.23 0.97 16 16 C -0.12 0.77 3.88 -10.27 -0.04 0.73 16 17 H 0.08 -0.01 8.01 -2.39 -0.02 -0.03 16 18 C 0.14 -1.29 6.39 86.38 0.55 -0.74 16 19 N -0.38 0.42 3.69 -352.04 -1.30 -0.88 16 20 C 0.26 -0.43 12.63 180.36 2.28 1.85 16 21 N -0.59 -3.38 11.19 -204.00 -2.28 -5.67 16 22 C 0.19 1.01 13.03 180.77 2.36 3.36 16 23 N -0.35 -2.09 12.46 -61.25 -0.76 -2.85 16 24 C -0.12 1.21 7.39 31.12 0.23 1.44 16 25 N -0.52 2.64 5.99 -171.93 -1.03 1.61 16 26 H 0.09 -0.79 8.14 -2.39 -0.02 -0.81 16 27 H 0.09 -0.58 7.42 -2.38 -0.02 -0.60 16 28 H 0.09 -1.06 8.14 -2.39 -0.02 -1.07 16 29 H 0.11 -0.01 6.76 -2.39 -0.02 -0.03 16 30 H 0.39 -1.41 7.79 -74.06 -0.58 -1.99 16 31 H -0.29 -2.25 7.11 99.48 0.71 -1.54 16 32 H -0.29 -2.25 7.11 99.48 0.71 -1.55 16 33 H 0.09 -0.10 8.14 -2.39 -0.02 -0.12 16 34 H 0.08 -0.31 4.38 -2.39 -0.01 -0.32 16 35 H 0.07 0.36 6.49 -2.39 -0.02 0.34 16 36 H 0.41 -5.17 7.86 -92.71 -0.73 -5.90 16 37 H 0.11 -1.06 7.90 -2.38 -0.02 -1.08 16 38 H 0.05 0.06 8.14 -2.39 -0.02 0.04 16 39 H 0.14 -2.47 7.79 -2.39 -0.02 -2.49 16 40 H 0.10 -1.07 8.14 -2.39 -0.02 -1.08 16 41 H 0.26 -3.14 8.06 -2.91 -0.02 -3.17 16 42 H 0.23 -0.03 8.06 -2.91 -0.02 -0.06 16 43 H 0.08 -0.73 8.14 -2.39 -0.02 -0.75 16 44 H 0.12 -2.05 8.08 -2.39 -0.02 -2.07 16 45 H 0.43 -5.51 8.19 -92.71 -0.76 -6.27 16 Total: 0.00 -31.29 371.39 -0.32 -31.61 By element: Atomic # 1 Polarization: -29.36 SS G_CDS: -0.97 Total: -30.33 kcal Atomic # 6 Polarization: 3.15 SS G_CDS: 8.37 Total: 11.51 kcal Atomic # 7 Polarization: 1.24 SS G_CDS: -7.75 Total: -6.51 kcal Atomic # 8 Polarization: -7.61 SS G_CDS: -1.98 Total: -9.59 kcal Atomic # 14 Polarization: 1.30 SS G_CDS: 2.01 Total: 3.31 kcal Total: -31.29 -0.32 -31.61 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14644236_12297754.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 121.192 kcal (2) G-P(sol) polarization free energy of solvation -31.287 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 89.904 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.321 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.608 kcal (6) G-S(sol) free energy of system = (1) + (5) 89.583 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.13 seconds