Wall clock time and date at job start Sun Mar 7 2021 00:05:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35656 * 117.00275 * 2 1 4 4 C 1.38403 * 120.11742 * 0.02562 * 3 2 1 5 5 C 1.38733 * 120.03089 * 180.02562 * 4 3 2 6 6 O 1.35712 * 119.86130 * 179.97438 * 5 4 3 7 7 C 1.42900 * 117.00373 * 359.97438 * 6 5 4 8 8 C 1.39145 * 120.27204 * 359.97438 * 5 4 3 9 9 C 1.50698 * 119.87838 * 179.97438 * 8 5 4 10 10 O 1.42894 * 109.47242 * 285.00606 * 9 8 5 11 11 Si 1.86301 * 109.47039 * 164.99981 * 9 8 5 12 12 C 1.37580 * 120.24264 * 359.74462 * 8 5 4 13 13 C 1.39829 * 119.96217 * 0.53214 * 12 8 5 14 14 C 1.47296 * 120.13497 * 179.74539 * 13 12 8 15 15 O 1.21619 * 119.99866 * 179.72401 * 14 13 12 16 16 N 1.34778 * 120.00178 * 359.72121 * 14 13 12 17 17 C 1.46493 * 120.00221 * 179.97438 * 16 14 13 18 18 H 1.09004 * 112.90582 * 336.25507 * 17 16 14 19 19 C 1.53787 * 113.61486 * 107.50176 * 17 16 14 20 20 C 1.53784 * 87.07956 * 139.98420 * 19 17 16 21 21 H 1.09004 * 113.69128 * 89.12846 * 20 19 17 22 22 C 1.53001 * 113.61251 * 220.02333 * 20 19 17 23 23 N 1.46506 * 109.46688 * 272.49632 * 22 20 19 24 24 C 1.34424 * 126.82028 * 125.00386 * 23 22 20 25 25 N 1.30835 * 108.07649 * 179.97438 * 24 23 22 26 26 C 1.33238 * 109.83029 * 0.02562 * 25 24 23 27 27 N 1.30712 * 108.94316 * 359.75029 * 26 25 24 28 28 C 1.53780 * 113.61730 * 205.00363 * 17 16 14 29 29 H 1.09007 * 109.46914 * 300.00050 * 1 2 3 30 30 H 1.09002 * 109.47315 * 59.99548 * 1 2 3 31 31 H 1.09001 * 109.46981 * 180.02562 * 1 2 3 32 32 H 1.07998 * 119.98608 * 359.97438 * 4 3 2 33 33 H 1.08997 * 109.47125 * 179.97438 * 7 6 5 34 34 H 1.08996 * 109.47342 * 300.00441 * 7 6 5 35 35 H 1.09002 * 109.46731 * 60.00012 * 7 6 5 36 36 H 1.09002 * 109.46867 * 45.00382 * 9 8 5 37 37 H 0.96705 * 113.99990 * 180.02562 * 10 9 8 38 38 H 1.48493 * 110.00197 * 298.68570 * 11 9 8 39 39 H 1.48504 * 109.99648 * 60.00609 * 11 9 8 40 40 H 1.08000 * 120.02535 * 180.27716 * 12 8 5 41 41 H 0.97003 * 119.99446 * 0.02562 * 16 14 13 42 42 H 1.08992 * 113.60810 * 25.43402 * 19 17 16 43 43 H 1.08995 * 113.61392 * 254.53324 * 19 17 16 44 44 H 1.08999 * 109.47230 * 152.49717 * 22 20 19 45 45 H 1.09000 * 109.47236 * 32.49312 * 22 20 19 46 46 H 1.07996 * 125.96633 * 359.92153 * 24 23 22 47 47 H 1.07993 * 125.52851 * 180.02562 * 26 25 24 48 48 H 1.08997 * 113.61849 * 105.47370 * 28 17 16 49 49 H 1.09003 * 113.68840 * 334.57649 * 28 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0449 1.2087 0.0000 4 6 1.2936 2.3710 0.0005 5 6 1.9253 3.6061 0.0000 6 8 1.1852 4.7437 0.0000 7 6 -0.2358 4.5932 0.0000 8 6 3.3146 3.6834 -0.0005 9 6 3.9917 5.0297 -0.0017 10 8 3.8936 5.6111 -1.3033 11 14 5.7866 4.8226 0.4524 12 6 4.0725 2.5351 0.0047 13 6 3.4462 1.2850 -0.0006 14 6 4.2539 0.0532 -0.0006 15 8 3.7065 -1.0328 -0.0001 16 7 5.5995 0.1297 -0.0012 17 6 6.4028 -1.0953 -0.0006 18 1 5.8670 -1.9538 0.4045 19 6 7.0945 -1.3791 -1.3445 20 6 8.3196 -1.8266 -0.5299 21 1 8.3093 -2.8849 -0.2689 22 6 9.6527 -1.3756 -1.1301 23 7 10.1120 -2.3708 -2.1023 24 6 10.4346 -2.1513 -3.3887 25 7 10.7961 -3.2923 -3.9170 26 6 10.7171 -4.2587 -3.0032 27 7 10.3074 -3.7427 -1.8742 28 6 7.8087 -0.9099 0.5942 29 1 -0.3633 0.5139 0.8900 30 1 -0.3634 0.5139 -0.8899 31 1 -0.3633 -1.0277 0.0005 32 1 0.2150 2.3165 0.0005 33 1 -0.7054 5.5768 0.0005 34 1 -0.5431 4.0439 -0.8899 35 1 -0.5430 4.0439 0.8900 36 1 3.5059 5.6812 0.7248 37 1 4.3093 6.4810 -1.3779 38 1 5.9023 4.2483 1.8169 39 1 6.4601 3.9363 -0.5305 40 1 5.1506 2.5992 0.0088 41 1 6.0360 0.9960 -0.0012 42 1 7.2705 -0.4848 -1.9422 43 1 6.6301 -2.1848 -1.9130 44 1 10.3929 -1.2745 -0.3364 45 1 9.5206 -0.4152 -1.6282 46 1 10.4004 -1.1993 -3.8976 47 1 10.9572 -5.2987 -3.1673 48 1 7.9210 -1.3369 1.5908 49 1 8.1812 0.1123 0.5273 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14644236_12297780.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:05:50 Heat of formation + Delta-G solvation = 23.950435 kcal Electronic energy + Delta-G solvation = -34280.723789 eV Core-core repulsion = 29600.174151 eV Total energy + Delta-G solvation = -4680.549638 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.167 amu Computer time = 1.38 seconds Orbital eigenvalues (eV) -42.95391 -42.10619 -41.03395 -40.13279 -39.26253 -38.35114 -37.05566 -35.43239 -34.01569 -32.38037 -32.08998 -31.72339 -29.17655 -29.10162 -28.23715 -26.91082 -26.09863 -25.26831 -24.03649 -22.93478 -22.88906 -22.11304 -21.50125 -20.64793 -20.00927 -18.63386 -18.51051 -18.43279 -18.05568 -17.45160 -17.11442 -17.03228 -16.62841 -16.56515 -16.45465 -16.28410 -15.89023 -15.78476 -15.69635 -15.43390 -15.30492 -15.05935 -14.55490 -14.36658 -14.21826 -13.98026 -13.79041 -13.77669 -13.65925 -13.54229 -13.20440 -12.89724 -12.76422 -12.65664 -12.58008 -12.40725 -12.23173 -11.99915 -11.98611 -11.70253 -11.62785 -10.89130 -10.77343 -10.67934 -10.53207 -10.30911 -10.05086 -9.94732 -9.17803 -5.10852 -0.25448 0.06714 0.72264 1.15985 1.33996 1.49032 1.78937 1.79563 2.00021 2.08980 2.10129 2.12555 2.62110 3.21412 3.26567 3.30643 3.34942 3.42833 3.44378 3.61634 3.64245 3.72009 3.79708 3.86631 3.92816 3.96613 4.02287 4.03073 4.04043 4.10604 4.11180 4.16912 4.23321 4.35058 4.38944 4.40105 4.45515 4.50391 4.59621 4.69386 4.73050 4.82403 4.88496 4.89963 4.99685 5.14969 5.23841 5.32613 5.50204 5.53155 5.85825 5.95936 6.24300 6.48921 6.64010 7.18649 7.30912 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.274 6.274 3 C 0.235 3.765 4 C -0.313 4.313 5 C 0.225 3.775 6 O -0.295 6.295 7 C 0.021 3.979 8 C -0.152 4.152 9 C -0.055 4.055 10 O -0.543 6.543 11 Si 0.677 3.323 12 C -0.013 4.013 13 C -0.210 4.210 14 C 0.568 3.432 15 O -0.515 6.515 16 N -0.725 5.725 17 C 0.129 3.871 18 H 0.120 0.880 19 C -0.148 4.148 20 C -0.120 4.120 21 H 0.111 0.889 22 C 0.141 3.859 23 N -0.377 5.377 24 C 0.253 3.747 25 N -0.547 5.547 26 C 0.199 3.801 27 N -0.317 5.317 28 C -0.138 4.138 29 H 0.058 0.942 30 H 0.058 0.942 31 H 0.108 0.892 32 H 0.147 0.853 33 H 0.108 0.892 34 H 0.060 0.940 35 H 0.059 0.941 36 H 0.075 0.925 37 H 0.380 0.620 38 H -0.250 1.250 39 H -0.249 1.249 40 H 0.134 0.866 41 H 0.395 0.605 42 H 0.086 0.914 43 H 0.075 0.925 44 H 0.093 0.907 45 H 0.103 0.897 46 H 0.217 0.783 47 H 0.217 0.783 48 H 0.084 0.916 49 H 0.089 0.911 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.091 8.757 2.288 9.117 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.184 6.184 3 C 0.186 3.814 4 C -0.332 4.332 5 C 0.177 3.823 6 O -0.206 6.206 7 C -0.074 4.074 8 C -0.153 4.153 9 C -0.166 4.166 10 O -0.349 6.349 11 Si 0.578 3.422 12 C -0.031 4.031 13 C -0.214 4.214 14 C 0.356 3.644 15 O -0.391 6.391 16 N -0.377 5.377 17 C 0.024 3.976 18 H 0.138 0.862 19 C -0.187 4.187 20 C -0.140 4.140 21 H 0.129 0.871 22 C 0.019 3.981 23 N -0.168 5.168 24 C -0.044 4.044 25 N -0.274 5.274 26 C -0.104 4.104 27 N -0.145 5.145 28 C -0.177 4.177 29 H 0.077 0.923 30 H 0.077 0.923 31 H 0.126 0.874 32 H 0.165 0.835 33 H 0.126 0.874 34 H 0.078 0.922 35 H 0.078 0.922 36 H 0.093 0.907 37 H 0.227 0.773 38 H -0.175 1.175 39 H -0.174 1.174 40 H 0.151 0.849 41 H 0.230 0.770 42 H 0.105 0.895 43 H 0.094 0.906 44 H 0.111 0.889 45 H 0.121 0.879 46 H 0.234 0.766 47 H 0.233 0.767 48 H 0.103 0.897 49 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges -1.098 6.426 2.788 7.090 hybrid contribution -0.943 0.586 -0.074 1.113 sum -2.041 7.012 2.714 7.791 Atomic orbital electron populations 1.23260 0.78116 1.04930 1.01388 1.86400 1.21283 1.24940 1.85737 1.18693 0.90530 0.84499 0.87710 1.21305 1.01198 0.91391 1.19344 1.18669 0.90281 0.84791 0.88557 1.86132 1.19507 1.28419 1.86564 1.23228 0.77729 1.04723 1.01697 1.18394 0.90239 0.94242 1.12435 1.24412 1.10056 0.93065 0.89021 1.86522 1.82017 1.37603 1.28757 0.95107 0.77826 0.89358 0.79938 1.20708 0.98650 0.90375 0.93384 1.19015 0.90808 0.93407 1.18205 1.17823 0.81814 0.88573 0.76209 1.90849 1.71316 1.28599 1.48298 1.45875 1.05987 1.09142 1.76675 1.22425 0.89856 0.88729 0.96595 0.86188 1.23596 0.95803 1.01989 0.97320 1.22704 0.92437 1.01706 0.97123 0.87083 1.21872 0.96363 0.88511 0.91370 1.50552 1.49156 1.06995 1.10110 1.26093 0.95337 0.99791 0.83163 1.70563 1.24966 0.98501 1.33361 1.26054 0.97560 1.00715 0.86101 1.78034 1.24158 0.88347 1.23982 1.23387 0.94860 1.00348 0.99088 0.92340 0.92314 0.87385 0.83544 0.87383 0.92154 0.92245 0.90749 0.77259 1.17456 1.17407 0.84938 0.77041 0.89505 0.90632 0.88873 0.87933 0.76643 0.76663 0.89716 0.89204 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.01 9.81 101.05 0.99 0.99 16 2 O -0.27 -1.17 8.56 -40.59 -0.35 -1.52 16 3 C 0.24 0.87 6.70 -38.73 -0.26 0.61 16 4 C -0.31 -0.53 8.01 -39.34 -0.31 -0.84 16 5 C 0.23 0.50 6.67 -39.06 -0.26 0.24 16 6 O -0.30 -0.40 9.80 -18.84 -0.18 -0.58 16 7 C 0.02 -0.05 9.80 101.05 0.99 0.94 16 8 C -0.15 -0.33 5.31 -104.53 -0.55 -0.88 16 9 C -0.05 0.01 2.36 36.00 0.08 0.10 16 10 O -0.54 -0.05 12.86 -35.23 -0.45 -0.50 16 11 Si 0.68 -1.65 30.18 -169.99 -5.13 -6.78 16 12 C -0.01 -0.03 8.14 -39.23 -0.32 -0.34 16 13 C -0.21 -0.78 5.89 -104.83 -0.62 -1.40 16 14 C 0.57 2.59 7.76 -12.58 -0.10 2.49 16 15 O -0.51 -4.17 14.75 -16.66 -0.25 -4.41 16 16 N -0.72 -0.79 5.30 -54.13 -0.29 -1.08 16 17 C 0.13 0.03 4.24 -67.12 -0.28 -0.25 16 18 H 0.12 0.27 7.47 -51.93 -0.39 -0.11 16 19 C -0.15 0.07 7.43 -25.91 -0.19 -0.12 16 20 C -0.12 0.19 3.88 -89.80 -0.35 -0.16 16 21 H 0.11 0.05 8.01 -51.93 -0.42 -0.37 16 22 C 0.14 -0.35 6.39 -4.04 -0.03 -0.37 16 23 N -0.38 -0.30 3.69 -62.63 -0.23 -0.53 16 24 C 0.25 0.16 12.63 -90.66 -1.14 -0.99 16 25 N -0.55 -1.91 11.19 -15.84 -0.18 -2.09 16 26 C 0.20 0.57 13.03 -91.82 -1.20 -0.63 16 27 N -0.32 -1.07 12.46 29.29 0.36 -0.70 16 28 C -0.14 0.34 7.39 -25.92 -0.19 0.15 16 29 H 0.06 -0.11 7.66 -51.92 -0.40 -0.51 16 30 H 0.06 -0.10 7.66 -51.93 -0.40 -0.50 16 31 H 0.11 -0.16 8.14 -51.93 -0.42 -0.58 16 32 H 0.15 -0.13 4.50 -52.49 -0.24 -0.37 16 33 H 0.11 -0.42 8.14 -51.93 -0.42 -0.84 16 34 H 0.06 -0.17 7.65 -51.93 -0.40 -0.57 16 35 H 0.06 -0.19 7.65 -51.93 -0.40 -0.59 16 36 H 0.07 -0.08 7.82 -51.93 -0.41 -0.48 16 37 H 0.38 -1.88 8.74 45.56 0.40 -1.48 16 38 H -0.25 0.06 7.11 56.52 0.40 0.46 16 39 H -0.25 0.23 6.75 56.52 0.38 0.61 16 40 H 0.13 0.00 3.20 -52.49 -0.17 -0.17 16 41 H 0.39 -0.46 6.75 -40.82 -0.28 -0.73 16 42 H 0.09 -0.14 7.90 -51.93 -0.41 -0.55 16 43 H 0.07 0.12 8.14 -51.93 -0.42 -0.31 16 44 H 0.09 -0.28 8.14 -51.93 -0.42 -0.70 16 45 H 0.10 -0.53 7.79 -51.93 -0.40 -0.93 16 46 H 0.22 -0.81 8.06 -52.49 -0.42 -1.23 16 47 H 0.22 -0.05 8.06 -52.49 -0.42 -0.47 16 48 H 0.08 -0.20 8.14 -51.93 -0.42 -0.63 16 49 H 0.09 -0.38 8.08 -51.93 -0.42 -0.80 16 LS Contribution 405.73 15.07 6.11 6.11 Total: 0.00 -13.58 405.73 -10.81 -24.38 By element: Atomic # 1 Polarization: -5.35 SS G_CDS: -6.49 Total: -11.84 kcal Atomic # 6 Polarization: 3.29 SS G_CDS: -3.74 Total: -0.45 kcal Atomic # 7 Polarization: -4.08 SS G_CDS: -0.33 Total: -4.41 kcal Atomic # 8 Polarization: -5.79 SS G_CDS: -1.23 Total: -7.02 kcal Atomic # 14 Polarization: -1.65 SS G_CDS: -5.13 Total: -6.78 kcal Total LS contribution 6.11 Total: 6.11 kcal Total: -13.58 -10.81 -24.38 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14644236_12297780.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 48.334 kcal (2) G-P(sol) polarization free energy of solvation -13.575 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 34.758 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.808 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.383 kcal (6) G-S(sol) free energy of system = (1) + (5) 23.950 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.38 seconds