Wall clock time and date at job start Sun Mar 7 2021 00:05:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86292 * 109.47204 * 2 1 4 4 C 1.50695 * 109.47171 * 119.99977 * 2 1 3 5 5 C 1.38419 * 119.89287 * 244.98093 * 4 2 1 6 6 C 1.38244 * 120.34030 * 180.02562 * 5 4 2 7 7 C 1.38284 * 120.11822 * 359.71350 * 6 5 4 8 8 F 1.35101 * 120.10831 * 180.28347 * 7 6 5 9 9 C 1.39863 * 119.77772 * 0.57710 * 7 6 5 10 10 C 1.47685 * 120.16542 * 179.69838 * 9 7 6 11 11 O 1.21576 * 120.00353 * 359.72661 * 10 9 7 12 12 N 1.34776 * 119.99874 * 179.73128 * 10 9 7 13 13 C 1.46506 * 119.99831 * 180.02562 * 12 10 9 14 14 H 1.08997 * 112.85420 * 23.80069 * 13 12 10 15 15 C 1.53781 * 113.61405 * 154.99784 * 13 12 10 16 16 C 1.53786 * 87.17350 * 140.02258 * 15 13 12 17 17 H 1.08993 * 113.61491 * 89.15923 * 16 15 13 18 18 C 1.52999 * 113.61361 * 220.06273 * 16 15 13 19 19 N 1.46494 * 109.47391 * 184.99937 * 18 16 15 20 20 C 1.34427 * 126.82501 * 124.70602 * 19 18 16 21 21 N 1.30838 * 108.07716 * 179.89584 * 20 19 18 22 22 C 1.33251 * 109.82657 * 0.38114 * 21 20 19 23 23 N 1.30712 * 108.94555 * 359.76213 * 22 21 20 24 24 C 1.53782 * 113.68817 * 252.53351 * 13 12 10 25 25 C 1.37900 * 119.89313 * 64.99633 * 4 2 1 26 26 H 0.96694 * 114.00414 * 300.00201 * 1 2 3 27 27 H 1.09000 * 109.46832 * 239.99809 * 2 1 3 28 28 H 1.48499 * 110.00047 * 178.68079 * 3 2 1 29 29 H 1.48510 * 110.00035 * 299.99939 * 3 2 1 30 30 H 1.07998 * 119.82876 * 0.02562 * 5 4 2 31 31 H 1.08004 * 119.94021 * 180.02562 * 6 5 4 32 32 H 0.96990 * 120.00286 * 359.97438 * 12 10 9 33 33 H 1.09002 * 113.61445 * 254.61257 * 15 13 12 34 34 H 1.09002 * 113.61408 * 25.42988 * 15 13 12 35 35 H 1.09002 * 109.47053 * 305.00261 * 18 16 15 36 36 H 1.09004 * 109.47121 * 64.99898 * 18 16 15 37 37 H 1.07992 * 125.95986 * 0.04487 * 20 19 18 38 38 H 1.08001 * 125.51953 * 179.72262 * 22 21 20 39 39 H 1.08997 * 113.61668 * 334.55345 * 24 13 12 40 40 H 1.08998 * 113.61674 * 105.37854 * 24 13 12 41 41 H 1.08004 * 120.05746 * 359.97438 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.6397 -0.0092 2.1909 6 6 3.1053 -0.6518 3.3229 7 6 2.8603 -2.0004 3.5056 8 9 3.3105 -2.6269 4.6147 9 6 2.1503 -2.7151 2.5353 10 6 1.8896 -4.1571 2.7185 11 8 2.2967 -4.7271 3.7122 12 7 1.2003 -4.8413 1.7840 13 6 0.9412 -6.2718 1.9660 14 1 0.9688 -6.5773 3.0119 15 6 -0.3003 -6.7739 1.2101 16 6 0.5097 -8.0370 0.8731 17 1 0.4191 -8.8259 1.6197 18 6 0.2932 -8.5410 -0.5552 19 7 1.0089 -9.8057 -0.7406 20 6 0.4876 -10.9730 -1.1562 21 7 1.4509 -11.8577 -1.1925 22 6 2.5945 -11.2970 -0.8009 23 7 2.3748 -10.0410 -0.5135 24 6 1.7734 -7.1733 1.0388 25 6 1.6840 -2.0569 1.3957 26 1 -0.3934 0.4417 0.7650 27 1 1.7922 -0.5139 -0.8900 28 1 3.5345 1.7702 0.0321 29 1 1.5614 2.4679 -1.2086 30 1 2.8297 1.0452 2.0552 31 1 3.6570 -0.0983 4.0684 32 1 0.8752 -4.3866 0.9914 33 1 -1.1574 -6.9643 1.8561 34 1 -0.5534 -6.1718 0.3375 35 1 -0.7717 -8.6974 -0.7278 36 1 0.6712 -7.8025 -1.2622 37 1 -0.5454 -11.1491 -1.4170 38 1 3.5481 -11.7993 -0.7317 39 1 2.0880 -6.6812 0.1185 40 1 2.5912 -7.6850 1.5461 41 1 1.1308 -2.6015 0.6448 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14644236_12335834.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:05:52 Heat of formation + Delta-G solvation = 42.039800 kcal Electronic energy + Delta-G solvation = -27500.550782 eV Core-core repulsion = 23299.771204 eV Total energy + Delta-G solvation = -4200.779578 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 333.128 amu Computer time = 1.05 seconds Orbital eigenvalues (eV) -50.04265 -42.98343 -41.57348 -40.42404 -39.37761 -37.42904 -35.57803 -34.27266 -32.54573 -32.24180 -32.16001 -29.05798 -26.76696 -26.62607 -25.87638 -24.38512 -23.10741 -22.86617 -22.16968 -21.71211 -20.74681 -19.21593 -18.41135 -18.33555 -18.23917 -17.44007 -17.05671 -16.96891 -16.77931 -16.27885 -16.10909 -15.95288 -15.85203 -15.67100 -15.62555 -15.06439 -14.80484 -14.53170 -14.51193 -14.38202 -13.70707 -13.68952 -13.49385 -13.30561 -13.13595 -12.94113 -12.82822 -12.26921 -12.17332 -11.96239 -11.88027 -11.46291 -11.19007 -10.98428 -10.79894 -10.58361 -10.46141 -10.42731 -10.12244 -9.84490 -4.96664 -0.52366 -0.05117 0.70339 1.31582 1.45447 1.56466 1.67567 1.94094 2.00862 2.02705 2.44879 3.02988 3.27532 3.34263 3.39097 3.46076 3.53515 3.56636 3.63213 3.66250 3.72341 3.91353 3.99090 4.08636 4.11339 4.17506 4.30506 4.42770 4.55039 4.57161 4.66992 4.67721 4.74300 4.77628 4.82805 4.92822 4.93698 5.01095 5.09939 5.12572 5.32815 5.45175 5.46860 5.57879 5.95492 6.33434 6.80071 7.02080 7.13361 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.550 6.550 2 C -0.064 4.064 3 Si 0.768 3.232 4 C -0.134 4.134 5 C -0.050 4.050 6 C -0.153 4.153 7 C 0.131 3.869 8 F -0.138 7.138 9 C -0.190 4.190 10 C 0.552 3.448 11 O -0.576 6.576 12 N -0.696 5.696 13 C 0.112 3.888 14 H 0.089 0.911 15 C -0.111 4.111 16 C -0.110 4.110 17 H 0.084 0.916 18 C 0.135 3.865 19 N -0.379 5.379 20 C 0.257 3.743 21 N -0.586 5.586 22 C 0.183 3.817 23 N -0.345 5.345 24 C -0.136 4.136 25 C -0.024 4.024 26 H 0.398 0.602 27 H 0.119 0.881 28 H -0.284 1.284 29 H -0.302 1.302 30 H 0.169 0.831 31 H 0.167 0.833 32 H 0.417 0.583 33 H 0.093 0.907 34 H 0.122 0.878 35 H 0.146 0.854 36 H 0.101 0.899 37 H 0.261 0.739 38 H 0.228 0.772 39 H 0.093 0.907 40 H 0.042 0.958 41 H 0.160 0.840 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.240 7.032 -4.052 10.876 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.358 6.358 2 C -0.174 4.174 3 Si 0.674 3.326 4 C -0.135 4.135 5 C -0.067 4.067 6 C -0.171 4.171 7 C 0.110 3.890 8 F -0.117 7.117 9 C -0.194 4.194 10 C 0.340 3.660 11 O -0.456 6.456 12 N -0.348 5.348 13 C 0.007 3.993 14 H 0.107 0.893 15 C -0.149 4.149 16 C -0.130 4.130 17 H 0.103 0.897 18 C 0.015 3.985 19 N -0.170 5.170 20 C -0.039 4.039 21 N -0.314 5.314 22 C -0.120 4.120 23 N -0.174 5.174 24 C -0.175 4.175 25 C -0.042 4.042 26 H 0.248 0.752 27 H 0.137 0.863 28 H -0.211 1.211 29 H -0.230 1.230 30 H 0.186 0.814 31 H 0.185 0.815 32 H 0.256 0.744 33 H 0.111 0.889 34 H 0.140 0.860 35 H 0.164 0.836 36 H 0.119 0.881 37 H 0.276 0.724 38 H 0.244 0.756 39 H 0.112 0.888 40 H 0.061 0.939 41 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges -5.922 7.114 -4.122 10.133 hybrid contribution 0.480 -0.864 0.072 0.991 sum -5.442 6.250 -4.050 9.224 Atomic orbital electron populations 1.86491 1.16610 1.82045 1.50678 1.25070 0.85637 1.10207 0.96513 0.93858 0.78018 0.75263 0.85433 1.20491 1.00616 0.94306 0.98082 1.21388 0.93297 1.00896 0.91116 1.21400 1.03225 0.91423 1.01055 1.18260 0.95735 0.91855 0.83117 1.91557 1.86555 1.83060 1.50496 1.20071 1.07017 0.93736 0.98534 1.18426 0.77935 0.86765 0.82831 1.90843 1.52636 1.71145 1.30981 1.45722 1.55497 1.10066 1.23495 1.22565 0.98034 0.78796 0.99918 0.89309 1.23301 0.95818 0.94496 1.01305 1.22514 0.97110 0.96921 0.96456 0.89744 1.22222 0.98081 0.81411 0.96818 1.50780 1.05801 1.11719 1.48709 1.26927 1.01762 0.81015 0.94197 1.70547 1.00034 1.34468 1.26343 1.26428 0.99304 0.89346 0.96907 1.78017 0.94500 1.18934 1.25915 1.23474 0.97043 0.96970 1.00034 1.21205 0.94634 0.94208 0.94162 0.75202 0.86318 1.21100 1.22988 0.81364 0.81540 0.74430 0.88875 0.85962 0.83584 0.88133 0.72390 0.75551 0.88842 0.93854 0.82211 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 4.21 12.83 -148.98 -1.91 2.30 16 2 C -0.06 0.52 2.80 71.23 0.20 0.72 16 3 Si 0.77 -6.10 29.79 68.60 2.04 -4.06 16 4 C -0.13 0.88 5.35 -19.90 -0.11 0.78 16 5 C -0.05 0.35 8.66 22.31 0.19 0.55 16 6 C -0.15 0.39 10.01 22.28 0.22 0.61 16 7 C 0.13 0.68 7.29 22.67 0.17 0.84 16 8 F -0.14 -1.76 15.55 44.97 0.70 -1.06 16 9 C -0.19 -0.57 5.88 -20.05 -0.12 -0.69 16 10 C 0.55 4.10 7.77 86.74 0.67 4.77 16 11 O -0.58 -10.25 14.94 -3.95 -0.06 -10.31 16 12 N -0.70 0.77 5.31 -443.04 -2.35 -1.59 16 13 C 0.11 -0.08 4.24 45.52 0.19 0.11 16 14 H 0.09 0.50 7.46 -2.39 -0.02 0.49 16 15 C -0.11 1.04 7.39 31.12 0.23 1.27 16 16 C -0.11 0.62 3.86 -10.20 -0.04 0.58 16 17 H 0.08 -0.15 8.14 -2.39 -0.02 -0.17 16 18 C 0.14 -1.18 6.39 86.38 0.55 -0.63 16 19 N -0.38 0.16 3.69 -352.07 -1.30 -1.14 16 20 C 0.26 -0.30 12.63 180.36 2.28 1.98 16 21 N -0.59 -3.75 11.19 -204.00 -2.28 -6.03 16 22 C 0.18 1.15 13.03 180.76 2.36 3.51 16 23 N -0.35 -2.33 12.57 -61.24 -0.77 -3.10 16 24 C -0.14 0.03 7.44 31.18 0.23 0.26 16 25 C -0.02 0.10 9.17 22.52 0.21 0.31 16 26 H 0.40 -6.00 8.70 -74.06 -0.64 -6.65 16 27 H 0.12 -0.94 7.96 -2.39 -0.02 -0.96 16 28 H -0.28 0.80 7.11 99.48 0.71 1.51 16 29 H -0.30 -0.23 7.11 99.48 0.71 0.48 16 30 H 0.17 -2.18 4.88 -2.91 -0.01 -2.19 16 31 H 0.17 -1.10 8.06 -2.91 -0.02 -1.12 16 32 H 0.42 -3.52 6.76 -92.72 -0.63 -4.14 16 33 H 0.09 -0.94 8.14 -2.39 -0.02 -0.96 16 34 H 0.12 -1.82 8.08 -2.39 -0.02 -1.84 16 35 H 0.15 -2.42 8.09 -2.39 -0.02 -2.44 16 36 H 0.10 -1.00 7.85 -2.38 -0.02 -1.02 16 37 H 0.26 -3.07 8.06 -2.91 -0.02 -3.10 16 38 H 0.23 0.24 8.06 -2.91 -0.02 0.22 16 39 H 0.09 -0.16 7.90 -2.39 -0.02 -0.18 16 40 H 0.04 0.30 8.14 -2.39 -0.02 0.28 16 41 H 0.16 -1.55 6.41 -2.91 -0.02 -1.57 16 Total: 0.00 -34.56 354.65 1.17 -33.38 By element: Atomic # 1 Polarization: -23.23 SS G_CDS: -0.13 Total: -23.36 kcal Atomic # 6 Polarization: 7.73 SS G_CDS: 7.24 Total: 14.96 kcal Atomic # 7 Polarization: -5.15 SS G_CDS: -6.70 Total: -11.86 kcal Atomic # 8 Polarization: -6.04 SS G_CDS: -1.97 Total: -8.01 kcal Atomic # 9 Polarization: -1.76 SS G_CDS: 0.70 Total: -1.06 kcal Atomic # 14 Polarization: -6.10 SS G_CDS: 2.04 Total: -4.06 kcal Total: -34.56 1.17 -33.38 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14644236_12335834.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 75.424 kcal (2) G-P(sol) polarization free energy of solvation -34.558 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 40.866 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.174 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.384 kcal (6) G-S(sol) free energy of system = (1) + (5) 42.040 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.05 seconds