Wall clock time and date at job start Sun Mar 7 2021 00:05:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86300 * 109.46999 * 2 1 4 4 C 1.50696 * 109.47616 * 240.00191 * 2 1 3 5 5 C 1.38237 * 120.00126 * 299.99834 * 4 2 1 6 6 C 1.38225 * 120.00652 * 179.97438 * 5 4 2 7 7 C 1.38240 * 119.99925 * 359.97438 * 6 5 4 8 8 C 1.50695 * 120.00153 * 179.97438 * 7 6 5 9 9 C 1.50706 * 109.47111 * 90.00047 * 8 7 6 10 10 O 1.21281 * 119.99922 * 359.97438 * 9 8 7 11 11 N 1.34779 * 119.99749 * 179.97438 * 9 8 7 12 12 C 1.46494 * 119.99525 * 179.97438 * 11 9 8 13 13 H 1.09000 * 112.91148 * 23.75262 * 12 11 9 14 14 C 1.53786 * 113.61370 * 155.00031 * 12 11 9 15 15 C 1.53781 * 87.17350 * 140.02367 * 14 12 11 16 16 H 1.09003 * 113.61462 * 89.16045 * 15 14 12 17 17 C 1.52991 * 113.61529 * 219.97788 * 15 14 12 18 18 N 1.46508 * 109.47429 * 184.99923 * 17 15 14 19 19 C 1.34426 * 126.81984 * 124.70705 * 18 17 15 20 20 N 1.30840 * 108.07312 * 179.89701 * 19 18 17 21 21 C 1.33244 * 109.82711 * 0.38357 * 20 19 18 22 22 N 1.30709 * 108.94622 * 359.76066 * 21 20 19 23 23 C 1.53781 * 87.08070 * 334.52830 * 15 14 12 24 24 C 1.38242 * 119.99775 * 0.27571 * 7 6 5 25 25 C 1.38236 * 120.00357 * 119.97231 * 4 2 1 26 26 H 0.96695 * 114.00500 * 299.99734 * 1 2 3 27 27 H 1.09001 * 109.47756 * 119.99682 * 2 1 3 28 28 H 1.48498 * 110.00432 * 178.67844 * 3 2 1 29 29 H 1.48504 * 110.00144 * 300.00259 * 3 2 1 30 30 H 1.08006 * 119.99767 * 359.97438 * 5 4 2 31 31 H 1.07993 * 120.00603 * 179.97438 * 6 5 4 32 32 H 1.09001 * 109.47391 * 330.00244 * 8 7 6 33 33 H 1.09005 * 109.47262 * 209.99980 * 8 7 6 34 34 H 0.97000 * 119.99938 * 359.97438 * 11 9 8 35 35 H 1.09002 * 113.61357 * 25.43283 * 14 12 11 36 36 H 1.09002 * 113.61608 * 254.61445 * 14 12 11 37 37 H 1.08997 * 109.47550 * 304.99814 * 17 15 14 38 38 H 1.09002 * 109.47334 * 65.00084 * 17 15 14 39 39 H 1.07996 * 125.96554 * 0.04585 * 19 18 17 40 40 H 1.07996 * 125.52605 * 179.73024 * 21 20 19 41 41 H 1.09005 * 113.61471 * 139.98321 * 23 15 14 42 42 H 1.08996 * 113.61178 * 270.79663 * 23 15 14 43 43 H 1.07995 * 119.99872 * 179.72703 * 24 7 6 44 44 H 1.07998 * 119.99846 * 0.02562 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7103 -1.2304 5 6 1.5976 -2.0338 -1.4493 6 6 2.0579 -2.6853 -2.5781 7 6 2.8518 -2.0132 -3.4886 8 6 3.3542 -2.7236 -4.7189 9 6 2.3610 -2.5513 -5.8392 10 8 1.3450 -1.9148 -5.6563 11 7 2.6019 -3.1047 -7.0444 12 6 1.6361 -2.9377 -8.1331 13 1 1.0071 -2.0559 -8.0109 14 6 2.2594 -3.0602 -9.5337 15 6 0.9977 -3.8378 -9.9439 16 1 0.1949 -3.2018 -10.3171 17 6 1.2833 -5.0314 -10.8572 18 7 0.0176 -5.6316 -11.2868 19 6 -0.3846 -5.8447 -12.5516 20 7 -1.5687 -6.3999 -12.5129 21 6 -1.9569 -6.5487 -11.2470 22 7 -1.0189 -6.0929 -10.4591 23 6 0.8459 -4.2186 -8.4617 24 6 3.1900 -0.6912 -3.2672 25 6 2.7257 -0.0384 -2.1406 26 1 -0.3934 0.4416 0.7650 27 1 1.7924 -0.5138 0.8900 28 1 3.5345 1.7704 0.0322 29 1 1.5613 2.4680 -1.2085 30 1 0.9769 -2.5589 -0.7381 31 1 1.7975 -3.7194 -2.7488 32 1 3.4762 -3.7847 -4.5015 33 1 4.3140 -2.3009 -5.0161 34 1 3.4147 -3.6134 -7.1907 35 1 3.1688 -3.6607 -9.5558 36 1 2.3701 -2.1053 -10.0474 37 1 1.8409 -4.6950 -11.7313 38 1 1.8707 -5.7720 -10.3144 39 1 0.1733 -5.6023 -13.4440 40 1 -2.8947 -6.9761 -10.9243 41 1 -0.1853 -4.1982 -8.1090 42 1 1.3676 -5.1365 -8.1912 43 1 3.8138 -0.1674 -3.9763 44 1 2.9865 0.9956 -1.9697 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14644236_12335836.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:05:57 Heat of formation + Delta-G solvation = 80.941786 kcal Electronic energy + Delta-G solvation = -26453.788589 eV Core-core repulsion = 22568.612284 eV Total energy + Delta-G solvation = -3885.176305 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 329.153 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -42.98262 -41.39063 -40.52294 -39.39396 -37.56147 -35.48299 -34.28453 -33.82150 -32.11875 -31.93171 -30.10309 -28.91214 -26.89946 -25.89671 -24.35176 -23.81877 -22.88910 -22.59967 -21.86411 -21.45445 -20.75376 -18.46818 -18.36420 -18.08400 -17.72700 -17.18648 -16.88577 -16.82029 -16.34283 -16.09479 -15.88703 -15.74783 -15.23474 -15.00967 -14.94030 -14.77929 -14.66157 -14.32828 -13.86067 -13.70712 -13.65165 -13.40296 -13.35149 -13.13238 -12.97639 -12.87406 -12.35304 -12.16848 -12.04269 -11.95015 -11.75619 -11.54268 -10.92893 -10.87714 -10.72158 -10.61883 -10.30996 -10.07414 -9.83601 -9.54800 -4.94727 0.26206 0.49012 0.68945 1.30909 1.31654 1.62699 1.66153 2.01677 2.06692 2.09871 2.76992 3.08750 3.26329 3.40183 3.42717 3.44863 3.58459 3.60276 3.79335 3.83361 3.85821 3.93294 3.97067 3.99308 4.03179 4.10675 4.19427 4.35009 4.38826 4.44666 4.47102 4.49013 4.54969 4.61210 4.70657 4.80322 4.99188 5.00086 5.08517 5.10125 5.31061 5.39138 5.46488 5.50171 5.57622 5.59828 5.82129 6.01573 6.42891 6.66541 7.15692 7.21740 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.545 6.545 2 C -0.072 4.072 3 Si 0.682 3.318 4 C -0.074 4.074 5 C -0.087 4.087 6 C -0.102 4.102 7 C -0.064 4.064 8 C -0.103 4.103 9 C 0.514 3.486 10 O -0.524 6.524 11 N -0.723 5.723 12 C 0.122 3.878 13 H 0.116 0.884 14 C -0.137 4.137 15 C -0.120 4.120 16 H 0.100 0.900 17 C 0.141 3.859 18 N -0.379 5.379 19 C 0.252 3.748 20 N -0.547 5.547 21 C 0.197 3.803 22 N -0.312 5.312 23 C -0.135 4.135 24 C -0.098 4.098 25 C -0.122 4.122 26 H 0.382 0.618 27 H 0.074 0.926 28 H -0.255 1.255 29 H -0.251 1.251 30 H 0.128 0.872 31 H 0.124 0.876 32 H 0.106 0.894 33 H 0.105 0.895 34 H 0.401 0.599 35 H 0.091 0.909 36 H 0.081 0.919 37 H 0.105 0.895 38 H 0.091 0.909 39 H 0.218 0.782 40 H 0.217 0.783 41 H 0.077 0.923 42 H 0.086 0.914 43 H 0.124 0.876 44 H 0.117 0.883 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.364 -0.123 0.604 6.394 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.182 4.182 3 Si 0.584 3.416 4 C -0.074 4.074 5 C -0.105 4.105 6 C -0.120 4.120 7 C -0.065 4.065 8 C -0.143 4.143 9 C 0.300 3.700 10 O -0.399 6.399 11 N -0.375 5.375 12 C 0.017 3.983 13 H 0.134 0.866 14 C -0.176 4.176 15 C -0.139 4.139 16 H 0.118 0.882 17 C 0.019 3.981 18 N -0.171 5.171 19 C -0.045 4.045 20 N -0.274 5.274 21 C -0.106 4.106 22 N -0.140 5.140 23 C -0.173 4.173 24 C -0.117 4.117 25 C -0.140 4.140 26 H 0.229 0.771 27 H 0.092 0.908 28 H -0.181 1.181 29 H -0.176 1.176 30 H 0.146 0.854 31 H 0.142 0.858 32 H 0.124 0.876 33 H 0.123 0.877 34 H 0.236 0.764 35 H 0.110 0.890 36 H 0.100 0.900 37 H 0.123 0.877 38 H 0.109 0.891 39 H 0.234 0.766 40 H 0.233 0.767 41 H 0.095 0.905 42 H 0.105 0.895 43 H 0.142 0.858 44 H 0.134 0.866 Dipole moment (debyes) X Y Z Total from point charges 6.038 0.564 0.293 6.071 hybrid contribution 0.633 -0.762 -0.523 1.120 sum 6.671 -0.198 -0.230 6.678 Atomic orbital electron populations 1.86511 1.17178 1.81764 1.49620 1.24687 0.85762 1.10297 0.97474 0.95466 0.80512 0.78191 0.87443 1.19343 0.98157 0.94556 0.95390 1.20944 0.98263 0.93776 0.97501 1.21025 0.96875 1.00084 0.94006 1.19248 0.98321 0.94123 0.94795 1.20694 0.98851 1.02959 0.91776 1.20621 0.87379 0.78656 0.83317 1.90775 1.27629 1.39525 1.81973 1.45969 1.24469 1.55762 1.11300 1.22524 0.91402 0.99610 0.84743 0.86633 1.23376 0.97251 1.01187 0.95744 1.22623 0.99297 0.96336 0.95670 0.88175 1.21865 0.80984 0.94906 1.00383 1.50589 1.15621 1.45768 1.05082 1.26133 0.92863 0.95786 0.89738 1.70570 1.11938 1.22145 1.22711 1.26079 0.99617 0.98383 0.86542 1.78092 0.97933 1.19801 1.18145 1.23497 1.01954 0.97946 0.93945 1.20842 1.00028 0.93932 0.96849 1.20791 0.99486 0.98689 0.94985 0.77091 0.90786 1.18053 1.17555 0.85399 0.85762 0.87600 0.87695 0.76438 0.89008 0.90017 0.87704 0.89087 0.76557 0.76710 0.90461 0.89523 0.85847 0.86551 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.91 12.74 -35.23 -0.45 -1.36 16 2 C -0.07 -0.09 2.81 36.00 0.10 0.01 16 3 Si 0.68 0.04 29.79 -169.99 -5.06 -5.02 16 4 C -0.07 -0.28 5.42 -104.62 -0.57 -0.85 16 5 C -0.09 -0.30 9.61 -39.59 -0.38 -0.68 16 6 C -0.10 -0.28 9.70 -39.59 -0.38 -0.66 16 7 C -0.06 -0.15 4.37 -104.62 -0.46 -0.61 16 8 C -0.10 0.10 5.83 -29.03 -0.17 -0.07 16 9 C 0.51 0.78 7.82 -10.98 -0.09 0.69 16 10 O -0.52 -3.46 15.64 5.56 0.09 -3.37 16 11 N -0.72 1.15 5.36 -52.88 -0.28 0.86 16 12 C 0.12 -0.12 4.25 -66.98 -0.28 -0.41 16 13 H 0.12 0.18 7.47 -51.93 -0.39 -0.21 16 14 C -0.14 0.53 7.39 -25.92 -0.19 0.34 16 15 C -0.12 0.30 3.85 -89.81 -0.35 -0.04 16 16 H 0.10 -0.10 8.14 -51.93 -0.42 -0.53 16 17 C 0.14 -0.47 6.39 -4.04 -0.03 -0.50 16 18 N -0.38 -0.05 3.69 -62.63 -0.23 -0.28 16 19 C 0.25 -0.01 12.63 -90.65 -1.14 -1.15 16 20 N -0.55 -1.65 11.19 -15.83 -0.18 -1.83 16 21 C 0.20 0.49 13.03 -91.81 -1.20 -0.71 16 22 N -0.31 -0.89 12.57 29.29 0.37 -0.52 16 23 C -0.13 0.11 7.44 -25.78 -0.19 -0.09 16 24 C -0.10 -0.30 9.70 -39.58 -0.38 -0.68 16 25 C -0.12 -0.48 8.67 -39.58 -0.34 -0.82 16 26 H 0.38 -1.39 8.74 45.56 0.40 -0.99 16 27 H 0.07 -0.05 7.96 -51.93 -0.41 -0.46 16 28 H -0.26 -0.55 7.11 56.52 0.40 -0.15 16 29 H -0.25 -0.91 7.11 56.52 0.40 -0.51 16 30 H 0.13 0.29 8.06 -52.48 -0.42 -0.14 16 31 H 0.12 0.10 8.06 -52.49 -0.42 -0.32 16 32 H 0.11 -0.34 8.09 -51.93 -0.42 -0.76 16 33 H 0.10 -0.35 8.08 -51.93 -0.42 -0.77 16 34 H 0.40 -1.90 8.73 -40.82 -0.36 -2.26 16 35 H 0.09 -0.52 8.08 -51.93 -0.42 -0.94 16 36 H 0.08 -0.31 8.14 -51.93 -0.42 -0.74 16 37 H 0.10 -0.65 8.09 -51.93 -0.42 -1.07 16 38 H 0.09 -0.34 7.84 -51.93 -0.41 -0.75 16 39 H 0.22 -0.98 8.06 -52.49 -0.42 -1.40 16 40 H 0.22 -0.10 8.06 -52.49 -0.42 -0.52 16 41 H 0.08 0.14 8.14 -51.93 -0.42 -0.28 16 42 H 0.09 -0.10 7.89 -51.93 -0.41 -0.51 16 43 H 0.12 0.13 8.06 -52.49 -0.42 -0.30 16 44 H 0.12 0.38 4.88 -52.49 -0.26 0.12 16 LS Contribution 374.68 15.07 5.65 5.65 Total: 0.00 -13.31 374.68 -12.25 -25.55 By element: Atomic # 1 Polarization: -7.38 SS G_CDS: -6.09 Total: -13.47 kcal Atomic # 6 Polarization: -0.17 SS G_CDS: -6.05 Total: -6.22 kcal Atomic # 7 Polarization: -1.44 SS G_CDS: -0.32 Total: -1.77 kcal Atomic # 8 Polarization: -4.36 SS G_CDS: -0.36 Total: -4.73 kcal Atomic # 14 Polarization: 0.04 SS G_CDS: -5.06 Total: -5.02 kcal Total LS contribution 5.65 Total: 5.65 kcal Total: -13.31 -12.25 -25.55 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14644236_12335836.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 106.496 kcal (2) G-P(sol) polarization free energy of solvation -13.308 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 93.188 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.246 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.555 kcal (6) G-S(sol) free energy of system = (1) + (5) 80.942 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds