Wall clock time and date at job start Sun Mar 7 2021 00:06:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42908 * 1 3 3 Si 1.86296 * 109.46972 * 2 1 4 4 C 1.50700 * 109.47292 * 239.99896 * 2 1 3 5 5 C 1.38406 * 119.82448 * 300.00463 * 4 2 1 6 6 C 1.37894 * 120.16790 * 180.02562 * 5 4 2 7 7 C 1.39834 * 119.82664 * 359.97438 * 6 5 4 8 8 C 1.47209 * 120.16791 * 179.97438 * 7 6 5 9 9 C 1.34805 * 119.99635 * 180.02562 * 8 7 6 10 10 C 1.46428 * 119.99991 * 180.02562 * 9 8 7 11 11 O 1.21702 * 119.99864 * 359.97438 * 10 9 8 12 12 N 1.34770 * 120.00480 * 179.97438 * 10 9 8 13 13 C 1.46502 * 120.00218 * 179.97438 * 12 10 9 14 14 H 1.09000 * 112.84940 * 23.80944 * 13 12 10 15 15 C 1.53787 * 113.61073 * 155.00331 * 13 12 10 16 16 C 1.53784 * 87.07923 * 140.06858 * 15 13 12 17 17 H 1.09002 * 113.61478 * 89.11632 * 16 15 13 18 18 C 1.52994 * 113.61233 * 220.01769 * 16 15 13 19 19 N 1.46502 * 109.47057 * 185.00081 * 18 16 15 20 20 C 1.34431 * 126.82500 * 124.71371 * 19 18 16 21 21 N 1.30836 * 108.07479 * 179.89448 * 20 19 18 22 22 C 1.33238 * 109.83108 * 0.37829 * 21 20 19 23 23 N 1.30714 * 108.94636 * 359.76020 * 22 21 20 24 24 C 1.53779 * 87.08045 * 334.56667 * 16 15 13 25 25 C 1.39836 * 119.66076 * 0.25908 * 7 6 5 26 26 C 1.37889 * 119.82687 * 359.46731 * 25 7 6 27 27 H 0.96694 * 113.99995 * 300.00051 * 1 2 3 28 28 H 1.08994 * 109.46649 * 119.99804 * 2 1 3 29 29 H 1.48501 * 110.00159 * 299.99537 * 3 2 1 30 30 H 1.48505 * 110.00326 * 61.31823 * 3 2 1 31 31 H 1.08002 * 119.91442 * 359.96614 * 5 4 2 32 32 H 1.07999 * 120.07960 * 180.02562 * 6 5 4 33 33 H 1.07995 * 119.99704 * 0.02562 * 8 7 6 34 34 H 1.07999 * 120.00347 * 359.97438 * 9 8 7 35 35 H 0.97001 * 120.00074 * 0.02562 * 12 10 9 36 36 H 1.09004 * 113.61202 * 254.61611 * 15 13 12 37 37 H 1.08994 * 113.61447 * 25.52042 * 15 13 12 38 38 H 1.08994 * 109.47510 * 304.99618 * 18 16 15 39 39 H 1.09001 * 109.47575 * 65.00169 * 18 16 15 40 40 H 1.07997 * 125.95828 * 0.03253 * 20 19 18 41 41 H 1.08004 * 125.52656 * 179.73281 * 22 21 20 42 42 H 1.09006 * 113.61307 * 270.88660 * 24 16 15 43 43 H 1.08999 * 113.69146 * 139.99146 * 24 16 15 44 44 H 1.07997 * 120.08513 * 179.74204 * 25 7 6 45 45 H 1.08004 * 119.91884 * 180.28009 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9315 -0.7104 -1.2304 5 6 1.5948 -2.0355 -1.4459 6 6 2.0510 -2.6926 -2.5691 7 6 2.8553 -2.0165 -3.4918 8 6 3.3469 -2.7108 -4.6932 9 6 4.1224 -2.0558 -5.5802 10 6 4.6110 -2.7463 -6.7755 11 8 4.3174 -3.9115 -6.9678 12 7 5.3859 -2.0914 -7.6626 13 6 5.8752 -2.7824 -8.8582 14 1 5.2526 -3.6311 -9.1411 15 6 6.1965 -1.8370 -10.0278 16 6 7.4275 -2.7180 -10.2987 17 1 7.2293 -3.5491 -10.9755 18 6 8.6775 -1.9233 -10.6818 19 7 9.7563 -2.8497 -11.0341 20 6 10.4554 -2.8733 -12.1821 21 7 11.3279 -3.8453 -12.1062 22 6 11.2109 -4.4671 -10.9337 23 7 10.2616 -3.8936 -10.2419 24 6 7.3773 -3.1085 -8.8122 25 6 3.1950 -0.6792 -3.2645 26 6 2.7264 -0.0342 -2.1395 27 1 -0.3933 0.4417 0.7650 28 1 1.7923 -0.5138 0.8900 29 1 1.5616 2.4679 -1.2085 30 1 1.5879 2.4586 1.2242 31 1 0.9740 -2.5565 -0.7320 32 1 1.7871 -3.7265 -2.7360 33 1 3.0863 -3.7449 -4.8638 34 1 4.3827 -1.0216 -5.4097 35 1 5.6204 -1.1627 -7.5091 36 1 5.4558 -1.8640 -10.8271 37 1 6.4455 -0.8233 -9.7142 38 1 8.4542 -1.2841 -11.5359 39 1 8.9889 -1.3069 -9.8384 40 1 10.3217 -2.2049 -13.0198 41 1 11.8041 -5.3088 -10.6078 42 1 7.9492 -2.4423 -8.1662 43 1 7.5900 -4.1616 -8.6286 44 1 3.8192 -0.1517 -3.9705 45 1 2.9841 1.0000 -1.9648 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14644236_12360594.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:06:34 Heat of formation + Delta-G solvation = 99.973432 kcal Electronic energy + Delta-G solvation = -27002.238799 eV Core-core repulsion = 22989.661628 eV Total energy + Delta-G solvation = -4012.577171 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 341.153 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -42.96542 -41.23455 -40.61095 -39.52770 -37.90517 -35.49856 -35.13400 -33.96244 -32.27056 -32.10176 -31.37171 -29.20422 -27.25618 -26.87463 -25.03650 -24.07022 -23.47845 -22.86961 -22.37401 -21.73045 -21.15971 -20.18422 -18.66985 -18.57363 -18.41647 -17.49426 -17.30317 -16.85210 -16.62645 -16.33576 -16.00405 -15.89343 -15.72066 -15.50687 -15.26456 -15.00388 -14.77157 -14.61215 -14.41212 -14.08160 -13.87200 -13.80817 -13.62364 -13.60490 -13.20621 -13.00179 -12.93381 -12.37330 -12.29036 -12.08977 -12.03240 -11.76898 -11.51725 -11.32962 -10.92182 -10.87937 -10.70494 -10.59961 -10.57405 -10.05575 -10.02048 -9.26248 -5.04616 -0.55952 0.35119 0.70584 0.89470 1.19950 1.32848 1.52057 1.87937 2.08342 2.17574 2.27700 2.74188 3.11412 3.23271 3.28919 3.41758 3.44801 3.56937 3.63862 3.69225 3.76531 3.84600 3.85552 3.96102 4.00566 4.08143 4.12272 4.18380 4.23786 4.31717 4.40780 4.47258 4.50655 4.58012 4.63493 4.78482 4.82946 4.91772 5.02409 5.04408 5.09584 5.13141 5.32761 5.34713 5.44489 5.51650 5.51950 5.57609 5.83845 5.83981 6.34597 6.49713 7.17307 7.25144 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.079 4.079 3 Si 0.682 3.318 4 C -0.061 4.061 5 C -0.094 4.094 6 C -0.092 4.092 7 C -0.075 4.075 8 C -0.013 4.013 9 C -0.217 4.217 10 C 0.549 3.451 11 O -0.543 6.543 12 N -0.717 5.717 13 C 0.122 3.878 14 H 0.117 0.883 15 C -0.137 4.137 16 C -0.120 4.120 17 H 0.100 0.900 18 C 0.141 3.859 19 N -0.379 5.379 20 C 0.252 3.748 21 N -0.547 5.547 22 C 0.196 3.804 23 N -0.312 5.312 24 C -0.135 4.135 25 C -0.095 4.095 26 C -0.117 4.117 27 H 0.381 0.619 28 H 0.079 0.921 29 H -0.255 1.255 30 H -0.260 1.260 31 H 0.129 0.871 32 H 0.132 0.868 33 H 0.138 0.862 34 H 0.131 0.869 35 H 0.402 0.598 36 H 0.082 0.918 37 H 0.092 0.908 38 H 0.105 0.895 39 H 0.091 0.909 40 H 0.218 0.782 41 H 0.216 0.784 42 H 0.087 0.913 43 H 0.077 0.923 44 H 0.133 0.867 45 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.873 6.165 1.206 6.342 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.189 4.189 3 Si 0.583 3.417 4 C -0.061 4.061 5 C -0.112 4.112 6 C -0.110 4.110 7 C -0.075 4.075 8 C -0.032 4.032 9 C -0.238 4.238 10 C 0.339 3.661 11 O -0.421 6.421 12 N -0.367 5.367 13 C 0.017 3.983 14 H 0.135 0.865 15 C -0.176 4.176 16 C -0.139 4.139 17 H 0.118 0.882 18 C 0.018 3.982 19 N -0.170 5.170 20 C -0.045 4.045 21 N -0.274 5.274 22 C -0.106 4.106 23 N -0.139 5.139 24 C -0.173 4.173 25 C -0.112 4.112 26 C -0.134 4.134 27 H 0.229 0.771 28 H 0.097 0.903 29 H -0.179 1.179 30 H -0.186 1.186 31 H 0.147 0.853 32 H 0.150 0.850 33 H 0.155 0.845 34 H 0.148 0.852 35 H 0.237 0.763 36 H 0.100 0.900 37 H 0.110 0.890 38 H 0.123 0.877 39 H 0.109 0.891 40 H 0.234 0.766 41 H 0.233 0.767 42 H 0.105 0.895 43 H 0.096 0.904 44 H 0.150 0.850 45 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 0.505 5.609 0.994 5.719 hybrid contribution -1.066 0.544 0.462 1.283 sum -0.561 6.153 1.456 6.348 Atomic orbital electron populations 1.86587 1.17651 1.80206 1.49850 1.24851 0.84612 1.11091 0.98340 0.95087 0.91668 0.74531 0.80412 1.19438 0.97292 0.94301 0.95054 1.20970 0.98700 0.93914 0.97573 1.21448 0.96046 1.00109 0.93364 1.19058 0.99355 0.93986 0.95074 1.22414 0.91032 0.99591 0.90210 1.22883 1.03722 1.01121 0.96035 1.18383 0.77924 0.86475 0.83364 1.90839 1.57990 1.16649 1.76647 1.45827 1.52251 1.15503 1.23113 1.22490 0.95006 0.96517 0.84263 0.86549 1.23383 0.97036 0.98702 0.98461 1.22630 0.93362 0.99334 0.98611 0.88158 1.21868 0.83843 0.89493 1.02948 1.50591 1.28555 1.25169 1.12705 1.26131 0.89713 0.97340 0.91350 1.70563 1.24910 1.09884 1.22042 1.26077 0.95666 1.00158 0.88743 1.78096 1.15211 1.01978 1.18663 1.23455 0.95761 1.03324 0.94802 1.21316 0.99103 0.93726 0.97087 1.20880 0.98765 0.99522 0.94265 0.77098 0.90319 1.17914 1.18556 0.85281 0.85009 0.84467 0.85166 0.76349 0.89964 0.88989 0.87708 0.89064 0.76567 0.76720 0.89498 0.90413 0.84974 0.85199 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.40 12.74 -35.23 -0.45 -0.85 16 2 C -0.08 0.05 2.81 36.01 0.10 0.15 16 3 Si 0.68 -1.01 29.77 -169.99 -5.06 -6.07 16 4 C -0.06 -0.04 5.43 -104.50 -0.57 -0.61 16 5 C -0.09 -0.08 9.59 -39.65 -0.38 -0.46 16 6 C -0.09 -0.04 9.80 -39.11 -0.38 -0.42 16 7 C -0.07 -0.03 5.87 -105.06 -0.62 -0.65 16 8 C -0.01 -0.01 9.46 -37.16 -0.35 -0.36 16 9 C -0.22 0.07 9.41 -37.50 -0.35 -0.28 16 10 C 0.55 0.99 7.74 -12.97 -0.10 0.89 16 11 O -0.54 -3.30 15.83 5.19 0.08 -3.22 16 12 N -0.72 0.90 5.35 -54.40 -0.29 0.61 16 13 C 0.12 -0.13 4.24 -67.12 -0.28 -0.41 16 14 H 0.12 0.14 7.46 -51.93 -0.39 -0.25 16 15 C -0.14 0.54 7.39 -25.91 -0.19 0.35 16 16 C -0.12 0.32 3.85 -89.81 -0.35 -0.02 16 17 H 0.10 -0.13 8.14 -51.93 -0.42 -0.55 16 18 C 0.14 -0.49 6.39 -4.04 -0.03 -0.51 16 19 N -0.38 0.01 3.69 -62.63 -0.23 -0.22 16 20 C 0.25 -0.04 12.63 -90.65 -1.14 -1.19 16 21 N -0.55 -1.57 11.19 -15.83 -0.18 -1.75 16 22 C 0.20 0.45 13.03 -91.82 -1.20 -0.74 16 23 N -0.31 -0.83 12.57 29.29 0.37 -0.46 16 24 C -0.13 0.13 7.43 -25.92 -0.19 -0.07 16 25 C -0.09 0.06 9.41 -39.11 -0.37 -0.31 16 26 C -0.12 0.04 8.65 -39.65 -0.34 -0.30 16 27 H 0.38 -1.21 8.74 45.56 0.40 -0.82 16 28 H 0.08 -0.18 7.96 -51.93 -0.41 -0.59 16 29 H -0.25 -0.42 7.11 56.52 0.40 -0.02 16 30 H -0.26 -0.16 7.11 56.52 0.40 0.24 16 31 H 0.13 0.00 8.06 -52.49 -0.42 -0.42 16 32 H 0.13 -0.14 8.06 -52.49 -0.42 -0.57 16 33 H 0.14 0.17 7.52 -52.49 -0.39 -0.23 16 34 H 0.13 -0.43 6.07 -52.49 -0.32 -0.74 16 35 H 0.40 -1.72 8.71 -40.82 -0.36 -2.08 16 36 H 0.08 -0.32 8.14 -51.93 -0.42 -0.75 16 37 H 0.09 -0.52 8.08 -51.93 -0.42 -0.94 16 38 H 0.10 -0.66 8.09 -51.93 -0.42 -1.08 16 39 H 0.09 -0.36 7.84 -51.93 -0.41 -0.76 16 40 H 0.22 -1.01 8.06 -52.49 -0.42 -1.43 16 41 H 0.22 -0.14 8.06 -52.48 -0.42 -0.56 16 42 H 0.09 -0.11 7.90 -51.93 -0.41 -0.52 16 43 H 0.08 0.12 8.14 -51.93 -0.42 -0.30 16 44 H 0.13 -0.41 6.17 -52.49 -0.32 -0.74 16 45 H 0.13 -0.30 4.85 -52.48 -0.25 -0.55 16 LS Contribution 384.53 15.07 5.79 5.79 Total: 0.00 -12.17 384.53 -12.57 -24.74 By element: Atomic # 1 Polarization: -7.77 SS G_CDS: -5.86 Total: -13.64 kcal Atomic # 6 Polarization: 1.80 SS G_CDS: -6.74 Total: -4.94 kcal Atomic # 7 Polarization: -1.48 SS G_CDS: -0.33 Total: -1.81 kcal Atomic # 8 Polarization: -3.71 SS G_CDS: -0.37 Total: -4.07 kcal Atomic # 14 Polarization: -1.01 SS G_CDS: -5.06 Total: -6.07 kcal Total LS contribution 5.79 Total: 5.79 kcal Total: -12.17 -12.57 -24.74 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14644236_12360594.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 124.715 kcal (2) G-P(sol) polarization free energy of solvation -12.170 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 112.545 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.572 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.742 kcal (6) G-S(sol) free energy of system = (1) + (5) 99.973 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds