Wall clock time and date at job start Sun Mar 7 2021 00:06:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86299 * 109.46895 * 2 1 4 4 C 1.50702 * 109.46968 * 119.99718 * 2 1 3 5 5 C 1.38618 * 119.84350 * 75.00162 * 4 2 1 6 6 F 1.35100 * 119.91207 * 359.97438 * 5 4 2 7 7 C 1.38106 * 120.16689 * 180.02562 * 5 4 2 8 8 C 1.39617 * 119.85151 * 359.97438 * 7 5 4 9 9 C 1.47699 * 120.15534 * 179.97438 * 8 7 5 10 10 O 1.21566 * 119.99818 * 180.02562 * 9 8 7 11 11 N 1.34777 * 119.99902 * 359.97438 * 9 8 7 12 12 C 1.46501 * 119.99904 * 180.02562 * 11 9 8 13 13 H 1.08994 * 112.84922 * 336.20616 * 12 11 9 14 14 C 1.53957 * 113.74035 * 107.40781 * 12 11 9 15 15 C 1.53783 * 87.01875 * 139.94464 * 14 12 11 16 16 H 1.08990 * 113.61571 * 89.22675 * 15 14 12 17 17 C 1.53000 * 113.61182 * 220.05000 * 15 14 12 18 18 N 1.46499 * 109.46840 * 274.13267 * 17 15 14 19 19 C 1.34434 * 126.82191 * 124.99999 * 18 17 15 20 20 N 1.30831 * 108.08020 * 179.97438 * 19 18 17 21 21 C 1.33245 * 109.82847 * 0.02562 * 20 19 18 22 22 N 1.30718 * 108.94531 * 359.75451 * 21 20 19 23 23 C 1.53778 * 113.61233 * 205.00475 * 12 11 9 24 24 C 1.39844 * 119.69172 * 0.25082 * 8 7 5 25 25 F 1.35095 * 120.08647 * 179.72946 * 24 8 7 26 26 C 1.38230 * 119.84188 * 254.97979 * 4 2 1 27 27 H 0.96696 * 113.99942 * 300.00211 * 1 2 3 28 28 H 1.08997 * 109.47478 * 239.99637 * 2 1 3 29 29 H 1.48500 * 109.99931 * 299.99679 * 3 2 1 30 30 H 1.48500 * 110.00201 * 61.32041 * 3 2 1 31 31 H 1.08002 * 120.07659 * 179.97438 * 7 5 4 32 32 H 0.97002 * 119.99980 * 0.02562 * 11 9 8 33 33 H 1.09003 * 113.61309 * 25.42314 * 14 12 11 34 34 H 1.09000 * 113.66774 * 254.47065 * 14 12 11 35 35 H 1.09002 * 109.47398 * 34.13594 * 17 15 14 36 36 H 1.09001 * 109.47194 * 154.13774 * 17 15 14 37 37 H 1.08001 * 125.96097 * 359.93544 * 19 18 17 38 38 H 1.07998 * 125.53102 * 179.97438 * 21 20 19 39 39 H 1.09000 * 113.61215 * 105.39106 * 23 12 11 40 40 H 1.09002 * 113.61764 * 334.48286 * 23 12 11 41 41 H 1.07997 * 119.92705 * 359.97438 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 1.8679 -2.0932 1.3029 6 9 1.3559 -2.7991 0.2711 7 6 2.3258 -2.7510 2.4276 8 6 2.8542 -2.0200 3.4934 9 6 3.3454 -2.7166 4.6996 10 8 3.8045 -2.0773 5.6261 11 7 3.2836 -4.0609 4.7736 12 6 3.7702 -4.7518 5.9703 13 1 4.5048 -4.1692 6.5261 14 6 2.6479 -5.3285 6.8525 15 6 3.5482 -6.5589 7.0540 16 1 4.2226 -6.4717 7.9057 17 6 2.7866 -7.8856 7.0325 18 7 2.2706 -8.1742 8.3729 19 6 0.9933 -8.4271 8.7073 20 7 0.9451 -8.6349 9.9981 21 6 2.1660 -8.5230 10.5198 22 7 3.0127 -8.2464 9.5631 23 6 4.2048 -6.2037 5.7094 24 6 2.9110 -0.6249 3.4158 25 9 3.4157 0.0906 4.4446 26 6 2.4536 0.0201 2.2814 27 1 -0.3933 0.4417 0.7650 28 1 1.7924 -0.5139 -0.8899 29 1 1.5615 2.4678 -1.2085 30 1 1.5879 2.4586 1.2242 31 1 2.2753 -3.8284 2.4827 32 1 2.9169 -4.5710 4.0345 33 1 1.7299 -5.5439 6.3058 34 1 2.4742 -4.7603 7.7664 35 1 1.9557 -7.8163 6.3304 36 1 3.4588 -8.6855 6.7220 37 1 0.1534 -8.4536 8.0289 38 1 2.4162 -8.6449 11.5633 39 1 5.2861 -6.3410 5.7019 40 1 3.7132 -6.6589 4.8497 41 1 2.5007 1.0972 2.2180 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14644236_12360598.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:06:36 Heat of formation + Delta-G solvation = 2.775705 kcal Electronic energy + Delta-G solvation = -29834.959407 eV Core-core repulsion = 25163.023234 eV Total energy + Delta-G solvation = -4671.936173 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 351.118 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -50.12696 -50.08758 -42.98011 -41.58154 -40.38223 -39.41967 -37.77304 -35.59224 -34.34412 -33.03236 -32.15958 -31.38450 -29.20032 -27.79980 -26.76523 -24.94884 -24.41310 -23.54285 -22.93337 -22.40442 -21.81397 -20.73970 -19.59959 -18.84359 -18.71376 -18.27820 -17.95337 -17.38144 -17.28286 -16.95259 -16.59005 -16.57292 -16.30672 -16.23824 -15.98116 -15.85569 -15.81397 -15.59471 -15.27140 -15.04501 -14.73973 -14.44907 -14.16404 -13.83266 -13.68931 -13.48698 -13.30729 -13.14342 -13.00453 -12.72000 -12.43250 -12.38515 -11.94440 -11.88349 -11.56208 -11.25252 -10.97173 -10.79729 -10.78741 -10.61663 -10.51721 -10.17885 -9.82637 -4.97072 -0.82291 -0.31267 0.70727 1.15131 1.36360 1.46322 1.53062 1.85084 1.90538 2.01571 2.22244 2.78338 2.84322 3.10097 3.23893 3.34762 3.43829 3.45902 3.46876 3.53866 3.54506 3.73979 3.78513 3.88898 4.13369 4.17076 4.17712 4.31354 4.37704 4.38896 4.51616 4.54887 4.67861 4.68595 4.71301 4.74760 4.78135 4.90969 5.01938 5.13244 5.31726 5.37402 5.45616 5.48428 5.96435 6.31500 6.37890 6.99350 7.13763 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.539 6.539 2 C -0.085 4.085 3 Si 0.769 3.231 4 C -0.091 4.091 5 C 0.105 3.895 6 F -0.126 7.126 7 C -0.073 4.073 8 C -0.147 4.147 9 C 0.557 3.443 10 O -0.566 6.566 11 N -0.692 5.692 12 C 0.116 3.884 13 H 0.089 0.911 14 C -0.143 4.143 15 C -0.116 4.116 16 H 0.080 0.920 17 C 0.135 3.865 18 N -0.377 5.377 19 C 0.256 3.744 20 N -0.586 5.586 21 C 0.185 3.815 22 N -0.351 5.351 23 C -0.114 4.114 24 C 0.137 3.863 25 F -0.127 7.127 26 C -0.132 4.132 27 H 0.390 0.610 28 H 0.134 0.866 29 H -0.294 1.294 30 H -0.273 1.273 31 H 0.186 0.814 32 H 0.419 0.581 33 H 0.112 0.888 34 H 0.043 0.957 35 H 0.144 0.856 36 H 0.102 0.898 37 H 0.259 0.741 38 H 0.230 0.770 39 H 0.084 0.916 40 H 0.128 0.872 41 H 0.169 0.831 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.082 -3.369 -7.391 8.123 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.348 6.348 2 C -0.194 4.194 3 Si 0.673 3.327 4 C -0.092 4.092 5 C 0.086 3.914 6 F -0.104 7.104 7 C -0.092 4.092 8 C -0.152 4.152 9 C 0.344 3.656 10 O -0.445 6.445 11 N -0.345 5.345 12 C 0.011 3.989 13 H 0.107 0.893 14 C -0.181 4.181 15 C -0.136 4.136 16 H 0.098 0.902 17 C 0.015 3.985 18 N -0.168 5.168 19 C -0.040 4.040 20 N -0.314 5.314 21 C -0.117 4.117 22 N -0.179 5.179 23 C -0.152 4.152 24 C 0.116 3.884 25 F -0.105 7.105 26 C -0.150 4.150 27 H 0.240 0.760 28 H 0.152 0.848 29 H -0.222 1.222 30 H -0.199 1.199 31 H 0.203 0.797 32 H 0.259 0.741 33 H 0.131 0.869 34 H 0.062 0.938 35 H 0.162 0.838 36 H 0.120 0.880 37 H 0.275 0.725 38 H 0.246 0.754 39 H 0.103 0.897 40 H 0.146 0.854 41 H 0.186 0.814 Dipole moment (debyes) X Y Z Total from point charges 0.642 -2.391 -7.073 7.494 hybrid contribution -1.199 -0.036 0.569 1.328 sum -0.556 -2.427 -6.504 6.964 Atomic orbital electron populations 1.86656 1.17457 1.80368 1.50277 1.25265 0.84170 1.12418 0.97499 0.93855 0.90162 0.71371 0.77291 1.20438 0.98816 0.92750 0.97239 1.17331 0.99102 0.88930 0.86073 1.91579 1.84358 1.78114 1.56390 1.21361 0.95673 1.02503 0.89684 1.19828 1.06417 0.92260 0.96660 1.18155 0.78222 0.83369 0.85866 1.90879 1.46691 1.66990 1.39954 1.45695 1.62921 1.05082 1.20765 1.22523 0.97102 0.92918 0.86325 0.89303 1.23616 0.98712 0.96269 0.99530 1.22523 0.98383 0.93236 0.99465 0.90161 1.22235 1.01478 0.97461 0.77333 1.50753 1.06413 1.51296 1.08327 1.26883 0.89416 0.94216 0.93437 1.70540 1.25531 1.26677 1.08696 1.26431 0.86291 0.97697 1.01318 1.77956 1.21406 1.26366 0.92189 1.23325 1.02563 0.92144 0.97199 1.17848 0.96377 0.88615 0.85547 1.91600 1.84143 1.77665 1.57086 1.21092 1.00391 1.02332 0.91172 0.76041 0.84808 1.22160 1.19905 0.79663 0.74092 0.86931 0.93757 0.83809 0.88005 0.72523 0.75387 0.89733 0.85382 0.81407 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.64 12.88 -148.98 -1.92 -1.28 16 2 C -0.09 0.38 2.44 71.24 0.17 0.56 16 3 Si 0.77 -4.21 30.23 68.60 2.07 -2.13 16 4 C -0.09 0.39 5.27 -19.77 -0.10 0.29 16 5 C 0.11 -0.45 7.23 22.33 0.16 -0.29 16 6 F -0.13 0.22 16.73 44.97 0.75 0.98 16 7 C -0.07 0.52 9.52 22.57 0.21 0.74 16 8 C -0.15 0.16 5.88 -20.06 -0.12 0.04 16 9 C 0.56 1.40 7.77 86.74 0.67 2.08 16 10 O -0.57 -7.35 14.94 -3.92 -0.06 -7.41 16 11 N -0.69 4.17 5.31 -442.77 -2.35 1.82 16 12 C 0.12 -0.52 4.24 45.58 0.19 -0.33 16 13 H 0.09 0.22 7.46 -2.39 -0.02 0.20 16 14 C -0.14 0.78 7.45 31.18 0.23 1.01 16 15 C -0.12 0.82 3.87 -10.26 -0.04 0.78 16 16 H 0.08 -0.03 8.04 -2.39 -0.02 -0.05 16 17 C 0.14 -1.33 6.37 86.38 0.55 -0.78 16 18 N -0.38 0.46 3.69 -352.06 -1.30 -0.83 16 19 C 0.26 -0.45 12.63 180.36 2.28 1.83 16 20 N -0.59 -3.42 11.19 -203.99 -2.28 -5.70 16 21 C 0.19 1.03 13.03 180.76 2.36 3.38 16 22 N -0.35 -2.10 12.48 -61.24 -0.76 -2.87 16 23 C -0.11 1.27 7.40 31.12 0.23 1.50 16 24 C 0.14 0.24 7.28 22.67 0.17 0.40 16 25 F -0.13 -1.07 15.55 44.97 0.70 -0.37 16 26 C -0.13 0.43 8.62 22.28 0.19 0.62 16 27 H 0.39 -2.86 8.70 -74.06 -0.64 -3.50 16 28 H 0.13 -0.77 7.89 -2.39 -0.02 -0.79 16 29 H -0.29 -0.68 7.11 99.48 0.71 0.03 16 30 H -0.27 0.66 6.68 99.48 0.66 1.32 16 31 H 0.19 -2.79 6.40 -2.91 -0.02 -2.81 16 32 H 0.42 -5.94 6.76 -92.71 -0.63 -6.57 16 33 H 0.11 -1.17 7.92 -2.39 -0.02 -1.19 16 34 H 0.04 0.06 8.14 -2.39 -0.02 0.04 16 35 H 0.14 -2.59 7.82 -2.39 -0.02 -2.61 16 36 H 0.10 -1.11 8.14 -2.39 -0.02 -1.13 16 37 H 0.26 -3.19 8.06 -2.91 -0.02 -3.21 16 38 H 0.23 0.02 8.06 -2.91 -0.02 -0.01 16 39 H 0.08 -0.83 8.14 -2.39 -0.02 -0.85 16 40 H 0.13 -2.28 8.08 -2.39 -0.02 -2.30 16 41 H 0.17 -0.98 4.83 -2.91 -0.01 -1.00 16 Total: 0.00 -32.26 360.22 1.86 -30.40 By element: Atomic # 1 Polarization: -24.27 SS G_CDS: -0.15 Total: -24.42 kcal Atomic # 6 Polarization: 4.66 SS G_CDS: 7.16 Total: 11.82 kcal Atomic # 7 Polarization: -0.88 SS G_CDS: -6.70 Total: -7.58 kcal Atomic # 8 Polarization: -6.71 SS G_CDS: -1.98 Total: -8.69 kcal Atomic # 9 Polarization: -0.85 SS G_CDS: 1.45 Total: 0.60 kcal Atomic # 14 Polarization: -4.21 SS G_CDS: 2.07 Total: -2.13 kcal Total: -32.26 1.86 -30.40 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14644236_12360598.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 33.179 kcal (2) G-P(sol) polarization free energy of solvation -32.261 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 0.917 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.858 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.403 kcal (6) G-S(sol) free energy of system = (1) + (5) 2.776 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.14 seconds