Wall clock time and date at job start Sun Mar 7 2021 00:06:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35662 * 116.99498 * 2 1 4 4 C 1.40137 * 120.14815 * 180.02562 * 3 2 1 5 5 C 1.47544 * 120.19317 * 359.95202 * 4 3 2 6 6 O 1.21586 * 119.99756 * 359.97438 * 5 4 3 7 7 N 1.34775 * 120.00143 * 180.02562 * 5 4 3 8 8 C 1.46499 * 120.00225 * 179.97438 * 7 5 4 9 9 H 1.09000 * 112.84537 * 336.19713 * 8 7 5 10 10 C 1.53952 * 113.66655 * 107.43799 * 8 7 5 11 11 C 1.53777 * 87.01651 * 139.93534 * 10 8 7 12 12 H 1.08994 * 113.61750 * 89.23287 * 11 10 8 13 13 C 1.53007 * 113.61391 * 220.04728 * 11 10 8 14 14 N 1.46504 * 109.47014 * 274.14150 * 13 11 10 15 15 C 1.34424 * 126.82251 * 125.02698 * 14 13 11 16 16 N 1.30835 * 108.07632 * 179.97438 * 15 14 13 17 17 C 1.33244 * 109.82681 * 359.97438 * 16 15 14 18 18 N 1.30712 * 108.94650 * 0.02562 * 17 16 15 19 19 C 1.53774 * 113.61363 * 204.99853 * 8 7 5 20 20 C 1.39706 * 119.61726 * 180.22986 * 4 3 2 21 21 C 1.37793 * 119.90397 * 359.51137 * 20 4 3 22 22 C 1.50701 * 119.84743 * 180.23365 * 21 20 4 23 23 O 1.42906 * 109.47097 * 65.23691 * 22 21 20 24 24 Si 1.86297 * 109.46999 * 185.23397 * 22 21 20 25 25 C 1.38544 * 120.30034 * 0.46701 * 21 20 4 26 26 C 1.38055 * 120.39278 * 359.78626 * 25 21 20 27 27 H 1.09008 * 109.46700 * 180.02562 * 1 2 3 28 28 H 1.08997 * 109.47585 * 300.00079 * 1 2 3 29 29 H 1.08995 * 109.47385 * 60.00488 * 1 2 3 30 30 H 0.97003 * 119.99774 * 0.02562 * 7 5 4 31 31 H 1.09003 * 113.61209 * 25.41047 * 10 8 7 32 32 H 1.09000 * 113.67009 * 254.46427 * 10 8 7 33 33 H 1.08991 * 109.47297 * 154.13607 * 13 11 10 34 34 H 1.09000 * 109.46694 * 34.13250 * 13 11 10 35 35 H 1.08003 * 125.96766 * 0.02562 * 15 14 13 36 36 H 1.07994 * 125.52303 * 179.97438 * 17 16 15 37 37 H 1.09001 * 113.61416 * 105.47210 * 19 8 7 38 38 H 1.08998 * 113.69377 * 334.58119 * 19 8 7 39 39 H 1.08002 * 120.04695 * 179.72365 * 20 4 3 40 40 H 1.08998 * 109.47251 * 305.23375 * 22 21 20 41 41 H 0.96704 * 113.99851 * 180.02562 * 23 22 21 42 42 H 1.48506 * 110.00378 * 299.99797 * 24 22 21 43 43 H 1.48497 * 110.00325 * 61.31780 * 24 22 21 44 44 H 1.08004 * 119.80427 * 179.76210 * 25 21 20 45 45 H 1.07997 * 119.96062 * 179.97438 * 26 25 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0448 1.2088 0.0000 4 6 3.4440 1.2859 -0.0005 5 6 4.2550 0.0534 0.0000 6 8 3.7096 -1.0333 0.0013 7 7 5.6005 0.1320 0.0000 8 6 6.4058 -1.0918 0.0010 9 1 5.8707 -1.9502 0.4071 10 6 7.0986 -1.3768 -1.3440 11 6 8.3239 -1.8199 -0.5273 12 1 8.3152 -2.8781 -0.2662 13 6 9.6566 -1.3670 -1.1271 14 7 10.0998 -2.3434 -2.1255 15 6 10.4153 -2.0969 -3.4087 16 7 10.7625 -3.2286 -3.9660 17 6 10.6820 -4.2151 -3.0738 18 7 10.2802 -3.7226 -1.9317 19 6 7.8111 -0.9039 0.5963 20 6 4.0666 2.5366 0.0043 21 6 3.3034 3.6838 -0.0005 22 6 3.9764 5.0323 -0.0006 23 8 4.6985 5.2042 -1.2218 24 14 2.6881 6.3692 0.1525 25 6 1.9203 3.6034 -0.0005 26 6 1.2922 2.3740 -0.0001 27 1 -0.3633 -1.0278 0.0005 28 1 -0.3634 0.5138 0.8899 29 1 -0.3634 0.5137 -0.8900 30 1 6.0356 0.9990 0.0000 31 1 7.2730 -0.4832 -1.9433 32 1 6.6367 -2.1847 -1.9115 33 1 10.4035 -1.2908 -0.3370 34 1 9.5294 -0.3942 -1.6020 35 1 10.3879 -1.1328 -3.8948 36 1 10.9108 -5.2532 -3.2640 37 1 7.9237 -1.3305 1.5930 38 1 8.1820 0.1189 0.5294 39 1 5.1445 2.6040 0.0085 40 1 4.6661 5.0942 0.8412 41 1 5.1581 6.0522 -1.2908 42 1 1.7414 6.2957 -0.9894 43 1 1.9514 6.2205 1.4332 44 1 1.3300 4.5078 -0.0005 45 1 0.2137 2.3194 0.0004 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14644236_12496546.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:06:41 Heat of formation + Delta-G solvation = 56.067129 kcal Electronic energy + Delta-G solvation = -29479.320882 eV Core-core repulsion = 25274.383739 eV Total energy + Delta-G solvation = -4204.937143 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.152 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -42.94933 -41.82724 -40.81144 -39.25197 -39.11915 -37.29415 -35.43776 -34.12215 -32.57429 -32.08491 -31.99523 -29.17425 -28.60053 -26.90327 -26.20687 -25.72914 -24.19930 -22.92643 -22.80584 -22.02106 -21.49113 -20.61906 -19.47051 -18.58430 -18.43895 -18.14866 -17.75612 -17.17506 -16.85886 -16.58322 -16.46552 -16.12711 -16.03454 -15.75368 -15.68928 -15.54900 -15.08612 -14.91033 -14.61952 -14.40634 -14.19389 -13.98451 -13.78129 -13.68279 -13.60756 -13.22807 -13.01077 -12.74363 -12.58468 -12.38147 -12.33991 -12.14048 -11.99638 -11.97323 -11.62899 -10.89064 -10.80538 -10.67994 -10.53574 -10.42145 -10.28780 -10.00222 -9.32819 -5.09390 -0.31970 0.13444 0.72690 1.15201 1.34629 1.51914 1.80224 1.83929 2.09733 2.11122 2.17326 2.64378 3.22511 3.22720 3.30269 3.34876 3.44440 3.44787 3.51484 3.65118 3.71632 3.80216 3.92591 3.95787 4.01455 4.05376 4.12983 4.16278 4.17870 4.24568 4.36510 4.37594 4.46408 4.52168 4.56672 4.61330 4.70686 4.81269 4.84666 4.90271 4.98237 5.15417 5.18288 5.33020 5.41665 5.51203 5.53465 5.86347 6.23028 6.48460 6.50858 7.19021 7.30004 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.278 6.278 3 C 0.193 3.807 4 C -0.174 4.174 5 C 0.564 3.436 6 O -0.514 6.514 7 N -0.721 5.721 8 C 0.129 3.871 9 H 0.119 0.881 10 C -0.148 4.148 11 C -0.121 4.121 12 H 0.110 0.890 13 C 0.141 3.859 14 N -0.377 5.377 15 C 0.253 3.747 16 N -0.547 5.547 17 C 0.198 3.802 18 N -0.317 5.317 19 C -0.136 4.136 20 C -0.016 4.016 21 C -0.124 4.124 22 C -0.065 4.065 23 O -0.546 6.546 24 Si 0.681 3.319 25 C -0.053 4.053 26 C -0.212 4.212 27 H 0.106 0.894 28 H 0.058 0.942 29 H 0.058 0.942 30 H 0.399 0.601 31 H 0.087 0.913 32 H 0.074 0.926 33 H 0.093 0.907 34 H 0.103 0.897 35 H 0.217 0.783 36 H 0.217 0.783 37 H 0.083 0.917 38 H 0.091 0.909 39 H 0.137 0.863 40 H 0.075 0.925 41 H 0.383 0.617 42 H -0.250 1.250 43 H -0.254 1.254 44 H 0.126 0.874 45 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.954 8.995 2.392 9.357 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.188 6.188 3 C 0.144 3.856 4 C -0.178 4.178 5 C 0.351 3.649 6 O -0.389 6.389 7 N -0.373 5.373 8 C 0.024 3.976 9 H 0.136 0.864 10 C -0.187 4.187 11 C -0.140 4.140 12 H 0.128 0.872 13 C 0.019 3.981 14 N -0.168 5.168 15 C -0.044 4.044 16 N -0.274 5.274 17 C -0.104 4.104 18 N -0.145 5.145 19 C -0.175 4.175 20 C -0.035 4.035 21 C -0.124 4.124 22 C -0.176 4.176 23 O -0.353 6.353 24 Si 0.582 3.418 25 C -0.071 4.071 26 C -0.231 4.231 27 H 0.125 0.875 28 H 0.077 0.923 29 H 0.077 0.923 30 H 0.234 0.766 31 H 0.106 0.894 32 H 0.093 0.907 33 H 0.111 0.889 34 H 0.121 0.879 35 H 0.234 0.766 36 H 0.233 0.767 37 H 0.102 0.898 38 H 0.110 0.890 39 H 0.154 0.846 40 H 0.093 0.907 41 H 0.231 0.769 42 H -0.175 1.175 43 H -0.179 1.179 44 H 0.143 0.857 45 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -0.516 7.152 2.737 7.676 hybrid contribution 0.025 0.388 0.012 0.389 sum -0.492 7.540 2.749 8.041 Atomic orbital electron populations 1.23246 0.78151 1.04837 1.01440 1.86384 1.21235 1.25036 1.86162 1.19065 0.90982 0.84989 0.90517 1.19342 0.90883 0.93914 1.13665 1.17950 0.81980 0.88574 0.76380 1.90850 1.71495 1.28566 1.47972 1.45851 1.05820 1.09323 1.76312 1.22447 0.89847 0.88780 0.96557 0.86361 1.23612 0.95765 1.01994 0.97286 1.22699 0.92454 1.01697 0.97177 0.87191 1.21870 0.96566 0.89022 0.90638 1.50553 1.49485 1.06625 1.10145 1.26094 0.95451 0.99960 0.82881 1.70566 1.25015 0.98278 1.33564 1.26053 0.97551 1.00609 0.86233 1.78034 1.24258 0.88314 1.23912 1.23366 0.94771 1.00396 0.98974 1.20933 0.99804 0.89718 0.93049 1.19103 0.92827 0.94041 1.06442 1.24571 1.02975 1.00248 0.89804 1.86495 1.69407 1.42347 1.37034 0.95209 0.79698 0.86330 0.80545 1.20884 0.93856 0.97186 0.95164 1.21185 1.00755 0.91458 1.09668 0.87519 0.92328 0.92316 0.76569 0.89448 0.90741 0.88907 0.87897 0.76627 0.76682 0.89806 0.89042 0.84573 0.90667 0.76919 1.17502 1.17896 0.85712 0.84135 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.00 9.81 101.05 0.99 0.99 16 2 O -0.28 -1.21 8.57 -40.57 -0.35 -1.56 16 3 C 0.19 0.67 6.70 -38.70 -0.26 0.41 16 4 C -0.17 -0.51 5.89 -104.84 -0.62 -1.12 16 5 C 0.56 2.15 7.76 -12.47 -0.10 2.05 16 6 O -0.51 -3.99 14.76 -16.59 -0.24 -4.23 16 7 N -0.72 0.04 5.31 -53.97 -0.29 -0.25 16 8 C 0.13 -0.05 4.24 -67.03 -0.28 -0.34 16 9 H 0.12 0.22 7.46 -51.93 -0.39 -0.16 16 10 C -0.15 0.15 7.45 -25.83 -0.19 -0.05 16 11 C -0.12 0.24 3.86 -89.81 -0.35 -0.10 16 12 H 0.11 0.02 8.03 -51.93 -0.42 -0.40 16 13 C 0.14 -0.41 6.37 -4.04 -0.03 -0.43 16 14 N -0.38 -0.20 3.69 -62.63 -0.23 -0.43 16 15 C 0.25 0.10 12.63 -90.66 -1.14 -1.05 16 16 N -0.55 -1.83 11.19 -15.83 -0.18 -2.01 16 17 C 0.20 0.54 13.03 -91.81 -1.20 -0.65 16 18 N -0.32 -1.01 12.47 29.29 0.37 -0.65 16 19 C -0.14 0.44 7.39 -25.92 -0.19 0.25 16 20 C -0.02 -0.01 9.16 -39.20 -0.36 -0.37 16 21 C -0.12 -0.10 5.38 -104.67 -0.56 -0.66 16 22 C -0.07 0.12 2.78 36.01 0.10 0.22 16 23 O -0.55 0.96 12.81 -35.23 -0.45 0.51 16 24 Si 0.68 -1.60 29.83 -169.99 -5.07 -6.67 16 25 C -0.05 -0.07 8.65 -39.54 -0.34 -0.41 16 26 C -0.21 -0.32 9.03 -39.48 -0.36 -0.68 16 27 H 0.11 -0.12 8.14 -51.92 -0.42 -0.54 16 28 H 0.06 -0.09 7.66 -51.93 -0.40 -0.48 16 29 H 0.06 -0.07 7.66 -51.93 -0.40 -0.47 16 30 H 0.40 -1.15 6.76 -40.82 -0.28 -1.43 16 31 H 0.09 -0.19 7.92 -51.93 -0.41 -0.60 16 32 H 0.07 0.10 8.14 -51.93 -0.42 -0.32 16 33 H 0.09 -0.31 8.14 -51.93 -0.42 -0.74 16 34 H 0.10 -0.58 7.82 -51.93 -0.41 -0.99 16 35 H 0.22 -0.87 8.06 -52.48 -0.42 -1.29 16 36 H 0.22 -0.07 8.06 -52.49 -0.42 -0.49 16 37 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 38 H 0.09 -0.47 8.08 -51.93 -0.42 -0.89 16 39 H 0.14 -0.31 6.40 -52.49 -0.34 -0.65 16 40 H 0.08 -0.28 7.96 -51.93 -0.41 -0.70 16 41 H 0.38 -2.54 8.74 45.56 0.40 -2.14 16 42 H -0.25 -0.21 7.04 56.52 0.40 0.19 16 43 H -0.25 -0.04 7.11 56.52 0.40 0.36 16 44 H 0.13 0.05 4.84 -52.48 -0.25 -0.21 16 45 H 0.14 -0.10 6.30 -52.49 -0.33 -0.43 16 LS Contribution 377.25 15.07 5.69 5.69 Total: 0.00 -13.19 377.25 -11.43 -24.62 By element: Atomic # 1 Polarization: -7.27 SS G_CDS: -5.79 Total: -13.06 kcal Atomic # 6 Polarization: 2.93 SS G_CDS: -4.88 Total: -1.96 kcal Atomic # 7 Polarization: -3.01 SS G_CDS: -0.33 Total: -3.34 kcal Atomic # 8 Polarization: -4.24 SS G_CDS: -1.04 Total: -5.29 kcal Atomic # 14 Polarization: -1.60 SS G_CDS: -5.07 Total: -6.67 kcal Total LS contribution 5.69 Total: 5.69 kcal Total: -13.19 -11.43 -24.62 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14644236_12496546.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 80.692 kcal (2) G-P(sol) polarization free energy of solvation -13.194 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 67.497 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.430 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.625 kcal (6) G-S(sol) free energy of system = (1) + (5) 56.067 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds