Wall clock time and date at job start Sun Mar 7 2021 00:06:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86304 * 109.47349 * 2 1 4 4 C 1.50703 * 109.47055 * 240.00160 * 2 1 3 5 5 C 1.37816 * 119.93926 * 254.72490 * 4 2 1 6 6 C 1.39677 * 119.87479 * 179.74736 * 5 4 2 7 7 C 1.47723 * 120.11360 * 180.25379 * 6 5 4 8 8 O 1.21572 * 120.00199 * 0.25479 * 7 6 5 9 9 N 1.34776 * 119.99807 * 180.24906 * 7 6 5 10 10 C 1.46499 * 120.00021 * 179.97438 * 9 7 6 11 11 H 1.09006 * 112.85162 * 334.67286 * 10 9 7 12 12 C 1.53781 * 113.61332 * 105.86413 * 10 9 7 13 13 C 1.53960 * 87.02136 * 139.95159 * 12 10 9 14 14 H 1.09007 * 113.60683 * 89.19665 * 13 12 10 15 15 C 1.52999 * 113.66984 * 220.06900 * 13 12 10 16 16 N 1.46500 * 109.46865 * 272.56174 * 15 13 12 17 17 C 1.34430 * 126.82454 * 124.71449 * 16 15 13 18 18 N 1.30830 * 108.07822 * 179.88773 * 17 16 15 19 19 C 1.33244 * 109.82807 * 0.38438 * 18 17 16 20 20 N 1.30714 * 108.94780 * 359.75497 * 19 18 17 21 21 C 1.53775 * 87.10811 * 334.64113 * 13 12 10 22 22 C 1.39624 * 119.76517 * 0.50529 * 6 5 4 23 23 C 1.37857 * 119.87940 * 359.77069 * 22 6 5 24 24 C 1.38630 * 120.12273 * 359.97438 * 23 22 6 25 25 F 1.35100 * 119.88455 * 180.02562 * 24 23 22 26 26 H 0.96708 * 114.00101 * 59.99198 * 1 2 3 27 27 H 1.09002 * 109.46984 * 120.00249 * 2 1 3 28 28 H 1.48497 * 110.00028 * 298.68295 * 3 2 1 29 29 H 1.48501 * 109.99652 * 59.99990 * 3 2 1 30 30 H 1.08000 * 120.05917 * 0.02562 * 5 4 2 31 31 H 0.96993 * 120.00156 * 0.02562 * 9 7 6 32 32 H 1.09001 * 113.61982 * 254.53042 * 12 10 9 33 33 H 1.08999 * 113.61676 * 25.43550 * 12 10 9 34 34 H 1.08996 * 109.46927 * 32.55698 * 15 13 12 35 35 H 1.08991 * 109.46881 * 152.55936 * 15 13 12 36 36 H 1.08005 * 125.95947 * 0.02993 * 17 16 15 37 37 H 1.08000 * 125.52333 * 179.73178 * 19 18 17 38 38 H 1.09002 * 113.61546 * 270.80465 * 21 13 12 39 39 H 1.09000 * 113.61749 * 139.90706 * 21 13 12 40 40 H 1.07999 * 120.05934 * 179.74291 * 22 6 5 41 41 H 1.08005 * 119.94033 * 180.02562 * 23 22 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.4572 -1.9799 -1.1253 6 6 2.9175 -2.6392 -2.2674 7 6 3.4771 -4.0022 -2.1615 8 8 3.5332 -4.5539 -1.0797 9 7 3.9252 -4.6342 -3.2644 10 6 4.4806 -5.9858 -3.1593 11 1 4.8825 -6.2025 -2.1695 12 6 3.5436 -7.0803 -3.6968 13 6 4.7962 -7.7463 -4.2952 14 1 5.2847 -8.4460 -3.6170 15 6 4.5737 -8.3296 -5.6920 16 7 4.0723 -9.7011 -5.5742 17 6 2.9455 -10.1962 -6.1150 18 7 2.8552 -11.4579 -5.7807 19 6 3.8966 -11.8005 -5.0234 20 7 4.6701 -10.7583 -4.8689 21 6 5.4384 -6.3491 -4.3062 22 6 2.8518 -2.0032 -3.5087 23 6 2.3291 -0.7310 -3.6017 24 6 1.8687 -0.0832 -2.4658 25 9 1.3569 1.1634 -2.5626 26 1 -0.3934 0.4418 -0.7650 27 1 1.7923 -0.5139 0.8900 28 1 1.5879 2.4586 -1.2242 29 1 1.5615 2.4678 1.2085 30 1 2.5091 -2.4658 -0.1622 31 1 3.8806 -4.1940 -4.1275 32 1 3.0663 -7.6698 -2.9140 33 1 2.8390 -6.7220 -4.4473 34 1 3.8453 -7.7213 -6.2280 35 1 5.5167 -8.3332 -6.2385 36 1 2.2394 -9.6487 -6.7216 37 1 4.0726 -12.7804 -4.6048 38 1 5.2529 -5.7905 -5.2236 39 1 6.4887 -6.3490 -4.0145 40 1 3.2102 -2.5069 -4.3942 41 1 2.2774 -0.2383 -4.5615 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14644236_12496548.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:06:45 Heat of formation + Delta-G solvation = 50.999553 kcal Electronic energy + Delta-G solvation = -27193.670933 eV Core-core repulsion = 22993.279879 eV Total energy + Delta-G solvation = -4200.391054 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 333.128 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -50.52948 -43.00668 -41.66988 -40.49255 -39.25150 -37.80016 -35.63088 -34.28580 -32.92668 -32.14352 -31.99403 -29.20496 -27.09428 -27.01986 -25.73440 -24.01128 -23.62345 -22.98331 -22.41060 -21.63969 -20.76020 -19.31427 -18.96115 -18.55095 -18.01627 -17.90903 -17.39936 -17.15220 -16.72257 -16.46945 -16.29664 -16.00357 -15.91236 -15.64439 -15.41702 -15.16878 -15.11465 -14.77372 -14.62026 -14.16579 -13.91889 -13.77611 -13.76576 -13.50622 -13.33979 -13.01028 -12.82353 -12.53548 -12.40644 -12.09493 -11.73330 -11.30372 -11.16673 -10.93726 -10.88266 -10.73792 -10.60374 -10.29996 -10.23043 -9.93129 -4.98158 -0.62820 -0.13170 0.66770 1.17443 1.28321 1.50394 1.60282 1.88845 1.98617 2.05159 2.45170 2.84297 3.10679 3.14701 3.19925 3.25817 3.35849 3.38999 3.40242 3.42945 3.55153 3.69638 3.74353 3.88446 3.97481 3.98296 4.15219 4.21177 4.29346 4.34784 4.45652 4.50358 4.58755 4.63021 4.70064 4.72386 4.79443 4.86161 4.94498 5.02332 5.27345 5.31558 5.45001 5.47859 5.80437 6.24586 6.26393 7.01588 7.13582 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.523 6.523 2 C -0.074 4.074 3 Si 0.675 3.325 4 C -0.151 4.151 5 C -0.009 4.009 6 C -0.145 4.145 7 C 0.562 3.438 8 O -0.527 6.527 9 N -0.716 5.716 10 C 0.126 3.874 11 H 0.120 0.880 12 C -0.148 4.148 13 C -0.121 4.121 14 H 0.111 0.889 15 C 0.141 3.859 16 N -0.378 5.378 17 C 0.253 3.747 18 N -0.547 5.547 19 C 0.199 3.801 20 N -0.317 5.317 21 C -0.136 4.136 22 C -0.055 4.055 23 C -0.153 4.153 24 C 0.120 3.880 25 F -0.122 7.122 26 H 0.375 0.625 27 H 0.125 0.875 28 H -0.231 1.231 29 H -0.259 1.259 30 H 0.151 0.849 31 H 0.400 0.600 32 H 0.075 0.925 33 H 0.087 0.913 34 H 0.103 0.897 35 H 0.093 0.907 36 H 0.217 0.783 37 H 0.217 0.783 38 H 0.092 0.908 39 H 0.085 0.915 40 H 0.138 0.862 41 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.113 3.243 -5.935 7.445 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.329 6.329 2 C -0.183 4.183 3 Si 0.574 3.426 4 C -0.152 4.152 5 C -0.028 4.028 6 C -0.148 4.148 7 C 0.350 3.650 8 O -0.404 6.404 9 N -0.368 5.368 10 C 0.022 3.978 11 H 0.138 0.862 12 C -0.187 4.187 13 C -0.141 4.141 14 H 0.129 0.871 15 C 0.019 3.981 16 N -0.169 5.169 17 C -0.044 4.044 18 N -0.274 5.274 19 C -0.104 4.104 20 N -0.145 5.145 21 C -0.175 4.175 22 C -0.074 4.074 23 C -0.171 4.171 24 C 0.100 3.900 25 F -0.101 7.101 26 H 0.223 0.777 27 H 0.143 0.857 28 H -0.154 1.154 29 H -0.184 1.184 30 H 0.168 0.832 31 H 0.236 0.764 32 H 0.094 0.906 33 H 0.106 0.894 34 H 0.121 0.879 35 H 0.111 0.889 36 H 0.234 0.766 37 H 0.234 0.766 38 H 0.110 0.890 39 H 0.103 0.897 40 H 0.156 0.844 41 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges 3.447 3.270 -4.297 6.406 hybrid contribution -1.322 0.357 -1.213 1.829 sum 2.125 3.628 -5.509 6.930 Atomic orbital electron populations 1.86663 1.17080 1.79892 1.49282 1.25000 0.84308 1.11480 0.97543 0.95454 0.91431 0.74642 0.81034 1.20282 1.03993 0.96447 0.94491 1.21055 0.91286 0.91304 0.99168 1.19999 1.05017 0.95300 0.94465 1.18158 0.77493 0.85122 0.84238 1.90831 1.55203 1.67164 1.27213 1.45866 1.63504 1.17207 1.10215 1.22483 0.94453 0.80367 1.00528 0.86243 1.23622 0.96671 0.97272 1.01108 1.22740 0.98563 0.96455 0.96305 0.87094 1.21858 1.01454 0.76702 0.98070 1.50557 1.18068 1.10286 1.38008 1.26095 0.89802 0.91314 0.97180 1.70567 1.25911 1.12060 1.18819 1.26066 0.88903 0.99172 0.96222 1.78039 1.22334 0.95750 1.18377 1.23365 1.00239 0.95035 0.98820 1.21158 0.95686 0.93789 0.96759 1.21097 1.01819 0.95959 0.98252 1.17913 0.97201 0.80493 0.94403 1.91581 1.84422 1.37668 1.96418 0.77698 0.85738 1.15439 1.18418 0.83173 0.76368 0.90615 0.89421 0.87928 0.88860 0.76640 0.76644 0.88997 0.89654 0.84445 0.83533 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.85 12.88 -35.23 -0.45 -1.30 16 2 C -0.07 0.01 2.81 36.01 0.10 0.11 16 3 Si 0.68 -0.36 30.81 -169.99 -5.24 -5.59 16 4 C -0.15 0.07 4.78 -104.61 -0.50 -0.43 16 5 C -0.01 0.00 9.21 -39.20 -0.36 -0.36 16 6 C -0.14 0.13 5.87 -104.97 -0.62 -0.48 16 7 C 0.56 0.24 7.77 -12.39 -0.10 0.15 16 8 O -0.53 -2.41 15.96 5.30 0.08 -2.32 16 9 N -0.72 2.04 5.31 -54.00 -0.29 1.76 16 10 C 0.13 -0.32 4.21 -67.12 -0.28 -0.60 16 11 H 0.12 -0.03 7.50 -51.93 -0.39 -0.42 16 12 C -0.15 0.40 7.45 -25.82 -0.19 0.21 16 13 C -0.12 0.41 3.88 -89.72 -0.35 0.06 16 14 H 0.11 -0.12 8.00 -51.93 -0.42 -0.54 16 15 C 0.14 -0.56 6.39 -4.04 -0.03 -0.59 16 16 N -0.38 0.14 3.69 -62.63 -0.23 -0.09 16 17 C 0.25 -0.10 12.63 -90.66 -1.14 -1.24 16 18 N -0.55 -1.46 11.19 -15.83 -0.18 -1.64 16 19 C 0.20 0.41 13.03 -91.81 -1.20 -0.79 16 20 N -0.32 -0.76 12.45 29.29 0.36 -0.40 16 21 C -0.14 0.66 7.39 -25.92 -0.19 0.47 16 22 C -0.06 0.19 9.54 -39.20 -0.37 -0.19 16 23 C -0.15 0.41 10.01 -39.58 -0.40 0.01 16 24 C 0.12 -0.10 6.63 -39.27 -0.26 -0.36 16 25 F -0.12 -0.04 12.57 2.25 0.03 -0.01 16 26 H 0.38 -0.35 8.41 45.56 0.38 0.04 16 27 H 0.12 -0.14 7.76 -51.93 -0.40 -0.54 16 28 H -0.23 -0.29 5.27 56.52 0.30 0.01 16 29 H -0.26 -0.73 7.11 56.52 0.40 -0.33 16 30 H 0.15 0.03 7.58 -52.49 -0.40 -0.37 16 31 H 0.40 -2.38 6.74 -40.82 -0.28 -2.65 16 32 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 33 H 0.09 -0.35 7.90 -51.93 -0.41 -0.76 16 34 H 0.10 -0.70 7.80 -51.93 -0.40 -1.11 16 35 H 0.09 -0.41 8.14 -51.93 -0.42 -0.83 16 36 H 0.22 -1.04 8.06 -52.48 -0.42 -1.46 16 37 H 0.22 -0.21 8.06 -52.49 -0.42 -0.63 16 38 H 0.09 -0.63 8.07 -51.93 -0.42 -1.05 16 39 H 0.08 -0.38 8.14 -51.93 -0.42 -0.81 16 40 H 0.14 -0.93 6.40 -52.49 -0.34 -1.26 16 41 H 0.15 -0.67 8.06 -52.48 -0.42 -1.09 16 LS Contribution 353.59 15.07 5.33 5.33 Total: 0.00 -11.18 353.59 -11.37 -22.55 By element: Atomic # 1 Polarization: -9.35 SS G_CDS: -4.91 Total: -14.26 kcal Atomic # 6 Polarization: 1.86 SS G_CDS: -5.88 Total: -4.03 kcal Atomic # 7 Polarization: -0.04 SS G_CDS: -0.33 Total: -0.37 kcal Atomic # 8 Polarization: -3.25 SS G_CDS: -0.37 Total: -3.62 kcal Atomic # 9 Polarization: -0.04 SS G_CDS: 0.03 Total: -0.01 kcal Atomic # 14 Polarization: -0.36 SS G_CDS: -5.24 Total: -5.59 kcal Total LS contribution 5.33 Total: 5.33 kcal Total: -11.18 -11.37 -22.55 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14644236_12496548.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 73.546 kcal (2) G-P(sol) polarization free energy of solvation -11.176 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 62.370 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.370 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.547 kcal (6) G-S(sol) free energy of system = (1) + (5) 51.000 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds