Wall clock time and date at job start Sun Mar 7 2021 00:07:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86300 * 109.46998 * 2 1 4 4 C 1.50699 * 109.47270 * 120.00013 * 2 1 3 5 5 C 1.38335 * 119.87428 * 65.00026 * 4 2 1 6 6 C 1.37994 * 120.13081 * 179.97438 * 5 4 2 7 7 C 1.39402 * 119.87057 * 0.02562 * 6 5 4 8 8 C 1.48272 * 120.12938 * 180.02562 * 7 6 5 9 9 C 1.39510 * 119.98048 * 179.97438 * 8 7 6 10 10 C 1.37663 * 120.02581 * 180.02562 * 9 8 7 11 11 C 1.39708 * 119.97598 * 359.97438 * 10 9 8 12 12 C 1.47722 * 120.02241 * 179.97438 * 11 10 9 13 13 O 1.21572 * 120.00008 * 0.02562 * 12 11 10 14 14 N 1.34775 * 119.99773 * 179.97438 * 12 11 10 15 15 C 1.46501 * 119.99838 * 180.02562 * 14 12 11 16 16 H 1.09003 * 112.85297 * 336.20137 * 15 14 12 17 17 C 1.53781 * 113.69050 * 107.46595 * 15 14 12 18 18 C 1.53778 * 87.08092 * 139.99343 * 17 15 14 19 19 H 1.09003 * 113.69428 * 89.13220 * 18 17 15 20 20 C 1.53004 * 113.61265 * 220.01963 * 18 17 15 21 21 N 1.46505 * 109.47120 * 272.49506 * 20 18 17 22 22 C 1.34428 * 126.82137 * 125.02328 * 21 20 18 23 23 N 1.30829 * 108.07758 * 179.97438 * 22 21 20 24 24 C 1.33239 * 109.82920 * 0.02562 * 23 22 21 25 25 N 1.30714 * 108.94945 * 359.97438 * 24 23 22 26 26 C 1.53775 * 87.08128 * 334.56558 * 18 17 15 27 27 C 1.39705 * 119.95055 * 0.25160 * 11 10 9 28 28 C 1.37667 * 119.97775 * 359.47196 * 27 11 10 29 29 C 1.39404 * 119.74789 * 0.27359 * 7 6 5 30 30 C 1.38008 * 119.86506 * 359.46918 * 29 7 6 31 31 H 0.96694 * 114.00173 * 60.00575 * 1 2 3 32 32 H 1.09000 * 109.47220 * 239.99611 * 2 1 3 33 33 H 1.48498 * 110.00108 * 60.00033 * 3 2 1 34 34 H 1.48498 * 110.00116 * 181.32070 * 3 2 1 35 35 H 1.08005 * 119.93464 * 359.97438 * 5 4 2 36 36 H 1.08003 * 120.06702 * 179.97438 * 6 5 4 37 37 H 1.08001 * 119.98190 * 359.97438 * 9 8 7 38 38 H 1.08002 * 120.01048 * 180.02562 * 10 9 8 39 39 H 0.96991 * 120.00322 * 0.02562 * 14 12 11 40 40 H 1.08997 * 113.61340 * 25.44270 * 17 15 14 41 41 H 1.08996 * 113.61621 * 254.54201 * 17 15 14 42 42 H 1.09005 * 109.46732 * 152.49936 * 20 18 17 43 43 H 1.08994 * 109.47332 * 32.49889 * 20 18 17 44 44 H 1.08003 * 125.95916 * 0.03061 * 22 21 20 45 45 H 1.07995 * 125.52955 * 180.02562 * 24 23 22 46 46 H 1.09002 * 113.61258 * 139.97953 * 26 18 17 47 47 H 1.08999 * 113.62219 * 270.80144 * 26 18 17 48 48 H 1.08000 * 120.00927 * 179.72268 * 27 11 10 49 49 H 1.07998 * 119.99005 * 180.27167 * 28 27 11 50 50 H 1.07995 * 120.06615 * 179.72815 * 29 7 6 51 51 H 1.08005 * 119.93172 * 180.27425 * 30 29 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.6832 -2.0612 1.3958 6 6 2.1412 -2.7171 2.5202 7 6 2.8548 -2.0157 3.4908 8 6 3.3501 -2.7148 4.7009 9 6 4.0644 -2.0099 5.6700 10 6 4.5251 -2.6582 6.7936 11 6 4.2767 -4.0225 6.9635 12 6 4.7711 -4.7193 8.1686 13 8 5.3940 -4.1055 9.0131 14 7 4.5307 -6.0353 8.3323 15 6 5.0205 -6.7263 9.5276 16 1 5.8748 -6.2271 9.9849 17 6 3.9115 -7.0904 10.5288 18 6 4.6469 -8.4247 10.7379 19 1 5.3993 -8.3913 11.5259 20 6 3.7101 -9.6280 10.8616 21 7 3.3082 -9.7922 12.2608 22 6 2.0524 -9.8474 12.7371 23 7 2.1168 -10.0006 14.0348 24 6 3.3909 -10.0467 14.4218 25 7 4.1584 -9.9236 13.3710 26 6 5.2253 -8.2369 9.3255 27 6 3.5653 -4.7284 5.9902 28 6 3.1006 -4.0770 4.8700 29 6 3.0966 -0.6532 3.3218 30 6 2.6382 -0.0090 2.1906 31 1 -0.3933 0.4416 -0.7650 32 1 1.7924 -0.5139 -0.8899 33 1 1.5615 2.4679 1.2085 34 1 3.5346 1.7704 -0.0322 35 1 1.1298 -2.6036 0.6434 36 1 1.9464 -3.7717 2.6485 37 1 4.2567 -0.9554 5.5381 38 1 5.0778 -2.1122 7.5438 39 1 4.0334 -6.5250 7.6587 40 1 2.9287 -7.2007 10.0707 41 1 3.8977 -6.4559 11.4150 42 1 4.2266 -10.5267 10.5240 43 1 2.8255 -9.4645 10.2462 44 1 1.1480 -9.7783 12.1507 45 1 3.7339 -10.1673 15.4387 46 1 6.2723 -8.5280 9.2402 47 1 4.6024 -8.6619 8.5384 48 1 3.3766 -5.7841 6.1185 49 1 2.5468 -4.6216 4.1196 50 1 3.6451 -0.1038 4.0725 51 1 2.8288 1.0456 2.0565 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14644236_13158362.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:07:07 Heat of formation + Delta-G solvation = 113.249907 kcal Electronic energy + Delta-G solvation = -33237.697818 eV Core-core repulsion = 28685.480317 eV Total energy + Delta-G solvation = -4552.217500 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 391.168 amu Computer time = 1.53 seconds Orbital eigenvalues (eV) -42.98918 -41.63267 -40.97586 -40.04628 -38.96999 -37.58664 -35.57881 -34.46141 -33.83756 -32.68059 -32.12327 -31.70256 -31.00385 -29.15461 -27.12115 -26.97395 -25.14371 -24.77903 -23.93842 -22.96606 -22.76780 -22.55077 -22.02814 -21.40343 -20.75302 -19.23784 -18.49349 -18.46622 -18.11868 -17.60046 -17.01007 -16.90308 -16.64534 -16.46985 -16.15469 -15.95395 -15.77696 -15.72384 -15.49271 -15.14937 -15.06579 -15.02959 -14.79243 -14.60723 -14.43115 -14.28000 -13.95778 -13.81533 -13.73439 -13.70131 -13.43772 -13.23035 -12.91805 -12.79573 -12.62145 -12.48533 -12.21874 -12.05661 -11.94679 -11.81600 -11.69966 -11.00818 -10.90604 -10.82421 -10.72061 -10.57981 -10.37800 -10.17051 -10.16066 -10.07834 -9.15870 -5.04276 -0.76249 0.23337 0.27577 0.43437 0.68648 1.20036 1.30274 1.56908 1.78317 1.89719 2.00137 2.06850 2.50957 2.90238 3.15205 3.23035 3.26584 3.29195 3.35941 3.40758 3.47914 3.55104 3.64960 3.72227 3.73503 3.74842 3.84846 3.88897 3.92361 4.00149 4.11789 4.14977 4.18892 4.21589 4.30967 4.31646 4.38447 4.51196 4.52400 4.57224 4.63190 4.73646 4.76261 4.79882 4.82486 4.92315 5.01550 5.06661 5.08532 5.17383 5.29121 5.30554 5.37969 5.39535 5.49636 5.53639 5.69317 5.79126 5.82270 6.36000 6.53051 7.11651 7.15284 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.545 6.545 2 C -0.073 4.073 3 Si 0.682 3.318 4 C -0.068 4.068 5 C -0.087 4.087 6 C -0.103 4.103 7 C -0.050 4.050 8 C -0.016 4.016 9 C -0.118 4.118 10 C -0.053 4.053 11 C -0.138 4.138 12 C 0.561 3.439 13 O -0.532 6.532 14 N -0.717 5.717 15 C 0.126 3.874 16 H 0.119 0.881 17 C -0.148 4.148 18 C -0.121 4.121 19 H 0.111 0.889 20 C 0.141 3.859 21 N -0.378 5.378 22 C 0.253 3.747 23 N -0.547 5.547 24 C 0.199 3.801 25 N -0.317 5.317 26 C -0.136 4.136 27 C -0.081 4.081 28 C -0.118 4.118 29 C -0.098 4.098 30 C -0.121 4.121 31 H 0.383 0.617 32 H 0.076 0.924 33 H -0.250 1.250 34 H -0.254 1.254 35 H 0.131 0.869 36 H 0.132 0.868 37 H 0.134 0.866 38 H 0.140 0.860 39 H 0.400 0.600 40 H 0.087 0.913 41 H 0.075 0.925 42 H 0.093 0.907 43 H 0.103 0.897 44 H 0.217 0.783 45 H 0.217 0.783 46 H 0.084 0.916 47 H 0.091 0.909 48 H 0.128 0.872 49 H 0.134 0.866 50 H 0.132 0.868 51 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.565 -1.170 -8.905 9.341 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.184 4.184 3 Si 0.583 3.417 4 C -0.068 4.068 5 C -0.105 4.105 6 C -0.121 4.121 7 C -0.050 4.050 8 C -0.016 4.016 9 C -0.136 4.136 10 C -0.072 4.072 11 C -0.141 4.141 12 C 0.349 3.651 13 O -0.409 6.409 14 N -0.369 5.369 15 C 0.021 3.979 16 H 0.137 0.863 17 C -0.186 4.186 18 C -0.140 4.140 19 H 0.129 0.871 20 C 0.019 3.981 21 N -0.169 5.169 22 C -0.044 4.044 23 N -0.274 5.274 24 C -0.104 4.104 25 N -0.145 5.145 26 C -0.175 4.175 27 C -0.100 4.100 28 C -0.136 4.136 29 C -0.116 4.116 30 C -0.138 4.138 31 H 0.231 0.769 32 H 0.094 0.906 33 H -0.175 1.175 34 H -0.179 1.179 35 H 0.149 0.851 36 H 0.149 0.851 37 H 0.152 0.848 38 H 0.158 0.842 39 H 0.236 0.764 40 H 0.106 0.894 41 H 0.093 0.907 42 H 0.111 0.889 43 H 0.121 0.879 44 H 0.234 0.766 45 H 0.233 0.767 46 H 0.103 0.897 47 H 0.110 0.890 48 H 0.146 0.854 49 H 0.152 0.848 50 H 0.149 0.851 51 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges -0.999 -0.471 -7.143 7.228 hybrid contribution -0.390 -0.793 -0.380 0.962 sum -1.389 -1.265 -7.523 7.754 Atomic orbital electron populations 1.86492 1.17065 1.81835 1.49758 1.24702 0.85839 1.10438 0.97408 0.95278 0.80853 0.78117 0.87442 1.19463 0.98091 0.94334 0.94953 1.20963 0.98262 0.93617 0.97704 1.21313 0.97186 1.00155 0.93408 1.18797 0.98954 0.93325 0.93937 1.18985 0.96109 0.93351 0.93155 1.21252 0.98349 1.00489 0.93531 1.21233 0.96131 0.92971 0.96860 1.19969 1.03245 0.95089 0.95764 1.18314 0.79111 0.81888 0.85833 1.90808 1.40195 1.65978 1.43925 1.45872 1.57779 1.09407 1.23802 1.22466 0.98077 0.91621 0.85736 0.86280 1.23587 0.98581 0.96384 1.00093 1.22707 0.98876 0.93629 0.98838 0.87105 1.21866 1.00184 0.99743 0.76297 1.50556 1.05031 1.53406 1.07872 1.26094 0.90101 0.96695 0.91502 1.70564 1.22014 1.24419 1.10387 1.26059 0.86708 0.98078 0.99524 1.78040 1.17764 1.25408 0.93316 1.23373 1.02812 0.95064 0.96274 1.21176 0.96111 0.99501 0.93204 1.21157 1.00629 0.93678 0.98110 1.21176 0.99397 0.93722 0.97328 1.20851 0.99595 0.99046 0.94326 0.76910 0.90638 1.17475 1.17895 0.85062 0.85056 0.84836 0.84208 0.76368 0.89418 0.90663 0.88874 0.87912 0.76637 0.76652 0.89742 0.89021 0.85402 0.84835 0.85067 0.86111 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.16 12.81 -35.23 -0.45 -0.29 16 2 C -0.07 0.04 2.79 36.01 0.10 0.14 16 3 Si 0.68 -0.94 29.84 -169.99 -5.07 -6.02 16 4 C -0.07 -0.11 5.39 -104.55 -0.56 -0.68 16 5 C -0.09 -0.08 9.67 -39.63 -0.38 -0.47 16 6 C -0.10 -0.04 9.43 -39.24 -0.37 -0.41 16 7 C -0.05 -0.05 5.88 -104.90 -0.62 -0.67 16 8 C -0.02 -0.01 5.88 -104.82 -0.62 -0.63 16 9 C -0.12 -0.07 9.41 -39.32 -0.37 -0.44 16 10 C -0.05 -0.08 9.58 -39.24 -0.38 -0.45 16 11 C -0.14 -0.14 5.88 -104.93 -0.62 -0.75 16 12 C 0.56 1.21 7.77 -12.39 -0.10 1.11 16 13 O -0.53 -3.27 15.93 5.30 0.08 -3.19 16 14 N -0.72 0.93 5.31 -54.00 -0.29 0.65 16 15 C 0.13 -0.16 4.24 -67.12 -0.28 -0.45 16 16 H 0.12 0.12 7.46 -51.93 -0.39 -0.27 16 17 C -0.15 0.27 7.43 -25.92 -0.19 0.08 16 18 C -0.12 0.31 3.88 -89.81 -0.35 -0.04 16 19 H 0.11 -0.04 8.00 -51.93 -0.42 -0.45 16 20 C 0.14 -0.47 6.39 -4.04 -0.03 -0.50 16 21 N -0.38 -0.05 3.69 -62.63 -0.23 -0.28 16 22 C 0.25 0.01 12.63 -90.66 -1.14 -1.13 16 23 N -0.55 -1.67 11.19 -15.83 -0.18 -1.85 16 24 C 0.20 0.48 13.03 -91.81 -1.20 -0.71 16 25 N -0.32 -0.91 12.45 29.29 0.36 -0.54 16 26 C -0.14 0.52 7.39 -25.92 -0.19 0.33 16 27 C -0.08 0.11 9.52 -39.24 -0.37 -0.27 16 28 C -0.12 0.10 9.41 -39.32 -0.37 -0.27 16 29 C -0.10 -0.13 9.43 -39.23 -0.37 -0.49 16 30 C -0.12 -0.23 8.65 -39.63 -0.34 -0.57 16 31 H 0.38 -2.03 8.74 45.56 0.40 -1.64 16 32 H 0.08 -0.17 7.96 -51.93 -0.41 -0.59 16 33 H -0.25 -0.45 7.04 56.52 0.40 -0.05 16 34 H -0.25 -0.28 7.11 56.52 0.40 0.13 16 35 H 0.13 -0.06 8.06 -52.48 -0.42 -0.48 16 36 H 0.13 -0.27 6.19 -52.48 -0.33 -0.59 16 37 H 0.13 -0.14 6.19 -52.49 -0.32 -0.46 16 38 H 0.14 0.23 7.64 -52.49 -0.40 -0.17 16 39 H 0.40 -1.70 6.75 -40.82 -0.28 -1.97 16 40 H 0.09 -0.27 7.90 -51.93 -0.41 -0.68 16 41 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 42 H 0.09 -0.35 8.14 -51.93 -0.42 -0.77 16 43 H 0.10 -0.64 7.79 -51.93 -0.40 -1.04 16 44 H 0.22 -0.94 8.06 -52.48 -0.42 -1.37 16 45 H 0.22 -0.13 8.06 -52.49 -0.42 -0.55 16 46 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 47 H 0.09 -0.53 8.08 -51.93 -0.42 -0.95 16 48 H 0.13 -0.58 6.39 -52.49 -0.34 -0.91 16 49 H 0.13 -0.40 6.19 -52.49 -0.32 -0.72 16 50 H 0.13 -0.08 6.19 -52.49 -0.33 -0.41 16 51 H 0.12 0.16 4.85 -52.48 -0.25 -0.09 16 LS Contribution 423.93 15.07 6.39 6.39 Total: 0.00 -13.06 423.93 -14.48 -27.55 By element: Atomic # 1 Polarization: -8.80 SS G_CDS: -6.36 Total: -15.15 kcal Atomic # 6 Polarization: 1.48 SS G_CDS: -8.75 Total: -7.26 kcal Atomic # 7 Polarization: -1.70 SS G_CDS: -0.33 Total: -2.03 kcal Atomic # 8 Polarization: -3.11 SS G_CDS: -0.37 Total: -3.47 kcal Atomic # 14 Polarization: -0.94 SS G_CDS: -5.07 Total: -6.02 kcal Total LS contribution 6.39 Total: 6.39 kcal Total: -13.06 -14.48 -27.55 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14644236_13158362.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 140.797 kcal (2) G-P(sol) polarization free energy of solvation -13.063 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 127.734 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.484 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.547 kcal (6) G-S(sol) free energy of system = (1) + (5) 113.250 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.53 seconds