Wall clock time and date at job start Sun Mar 7 2021 00:07:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.38975 * 119.95693 * 2 1 4 4 O 1.35711 * 119.91227 * 0.02562 * 3 2 1 5 5 C 1.39011 * 120.17485 * 180.02562 * 3 2 1 6 6 C 1.50707 * 119.95512 * 179.97438 * 5 3 2 7 7 O 1.42896 * 109.47028 * 75.02272 * 6 5 3 8 8 Si 1.86303 * 109.46988 * 195.02278 * 6 5 3 9 9 C 1.37679 * 120.09115 * 359.97438 * 5 3 2 10 10 C 1.39754 * 119.90998 * 359.97438 * 9 5 3 11 11 C 1.47611 * 120.08705 * 180.02562 * 10 9 5 12 12 O 1.21582 * 120.00110 * 0.02562 * 11 10 9 13 13 N 1.34776 * 119.99701 * 180.02562 * 11 10 9 14 14 C 1.46499 * 119.99725 * 180.02562 * 13 11 10 15 15 H 1.08997 * 112.85535 * 336.19829 * 14 13 11 16 16 C 1.53958 * 113.66742 * 107.44286 * 14 13 11 17 17 C 1.53781 * 87.02081 * 139.93141 * 16 14 13 18 18 H 1.08997 * 113.61020 * 89.23023 * 17 16 14 19 19 C 1.52995 * 113.61367 * 220.04892 * 17 16 14 20 20 N 1.46506 * 109.47276 * 274.13740 * 19 17 16 21 21 C 1.34429 * 126.82484 * 124.70840 * 20 19 17 22 22 N 1.30833 * 108.07882 * 179.89823 * 21 20 19 23 23 C 1.33246 * 109.82631 * 0.37653 * 22 21 20 24 24 N 1.30718 * 108.94642 * 359.76804 * 23 22 21 25 25 C 1.53777 * 87.17042 * 334.63924 * 17 16 14 26 26 C 1.37725 * 119.95279 * 180.25219 * 2 1 3 27 27 H 1.08996 * 109.47241 * 90.00029 * 1 2 3 28 28 H 1.09001 * 109.47460 * 209.99970 * 1 2 3 29 29 H 1.09001 * 109.46947 * 330.00118 * 1 2 3 30 30 H 0.96702 * 113.99843 * 270.02241 * 4 3 2 31 31 H 1.08995 * 109.46933 * 315.02167 * 6 5 3 32 32 H 0.96701 * 114.00089 * 60.00274 * 7 6 5 33 33 H 1.48503 * 109.99750 * 58.68111 * 8 6 5 34 34 H 1.48502 * 109.99554 * 179.97438 * 8 6 5 35 35 H 1.08000 * 120.04971 * 180.02562 * 9 5 3 36 36 H 0.97000 * 120.00434 * 359.97438 * 13 11 10 37 37 H 1.09005 * 113.60943 * 25.41083 * 16 14 13 38 38 H 1.09000 * 113.66441 * 254.46530 * 16 14 13 39 39 H 1.08997 * 109.47344 * 154.13512 * 19 17 16 40 40 H 1.08998 * 109.47310 * 34.13538 * 19 17 16 41 41 H 1.08005 * 125.95756 * 0.03916 * 21 20 19 42 42 H 1.07997 * 125.52166 * 179.79718 * 23 22 21 43 43 H 1.09010 * 113.60995 * 139.94280 * 25 17 16 44 44 H 1.09003 * 113.61735 * 270.83417 * 25 17 16 45 45 H 1.08000 * 120.04633 * 0.02835 * 26 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2010 1.2041 0.0000 4 8 1.5197 2.3778 0.0005 5 6 3.5911 1.2094 -0.0005 6 6 4.3386 2.5180 -0.0011 7 8 4.2731 3.1045 1.3003 8 14 6.1195 2.2156 -0.4570 9 6 4.2859 0.0208 -0.0005 10 6 3.5918 -1.1922 0.0005 11 6 4.3328 -2.4689 0.0011 12 8 5.5486 -2.4661 0.0011 13 7 3.6615 -3.6376 0.0016 14 6 4.3969 -4.9046 0.0028 15 1 5.4044 -4.8097 -0.4022 16 6 4.3411 -5.6504 1.3485 17 6 4.1913 -6.9456 0.5331 18 1 5.1423 -7.4105 0.2736 19 6 3.1902 -7.9350 1.1328 20 7 3.8647 -8.7665 2.1328 21 6 3.5052 -8.9327 3.4174 22 7 4.3598 -9.7513 3.9754 23 6 5.2795 -10.1206 3.0849 24 7 5.0189 -9.5434 1.9414 25 6 3.6020 -6.0788 -0.5922 26 6 2.1946 -1.1933 -0.0053 27 1 -0.3633 0.0000 -1.0276 28 1 -0.3634 -0.8900 0.5138 29 1 -0.3633 0.8900 0.5138 30 1 1.3217 2.7180 -0.8828 31 1 3.8873 3.1938 -0.7275 32 1 4.6573 2.5568 1.9984 33 1 6.1997 1.5765 -1.7951 34 1 6.8674 3.4985 -0.4617 35 1 5.3659 0.0257 -0.0005 36 1 2.6915 -3.6398 0.0020 37 1 3.4628 -5.4068 1.9465 38 1 5.2695 -5.5972 1.9170 39 1 2.7893 -8.5701 0.3428 40 1 2.3760 -7.3862 1.6060 41 1 2.6575 -8.4727 3.9034 42 1 6.1059 -10.7889 3.2766 43 1 3.9346 -6.3712 -1.5883 44 1 2.5213 -5.9527 -0.5259 45 1 1.6546 -2.1286 -0.0098 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14644236_13287732.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:07:35 Heat of formation + Delta-G solvation = 39.649981 kcal Electronic energy + Delta-G solvation = -29247.673200 eV Core-core repulsion = 25042.024157 eV Total energy + Delta-G solvation = -4205.649044 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.152 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -42.99825 -41.85470 -40.98214 -39.59481 -37.86468 -37.52791 -35.60091 -34.27174 -33.99485 -32.13351 -31.80853 -29.17500 -28.16728 -26.99993 -26.95539 -25.55649 -23.91679 -22.97439 -22.46918 -22.07771 -21.62020 -20.69309 -19.65727 -18.81595 -18.45922 -18.13010 -17.57070 -16.99909 -16.84646 -16.57855 -16.37323 -16.10909 -15.96263 -15.80978 -15.56996 -15.22869 -15.10948 -14.81150 -14.64139 -14.46035 -14.18252 -14.00237 -13.88005 -13.74744 -13.46148 -13.34523 -13.10906 -12.91888 -12.77933 -12.50608 -12.33692 -12.07533 -12.03471 -11.72663 -11.69476 -11.04783 -10.91878 -10.72951 -10.59180 -10.44231 -10.23321 -10.07429 -9.74545 -5.01281 -0.46947 -0.02136 0.67685 1.23560 1.29192 1.56857 1.64703 1.94325 1.94937 2.05934 2.49470 2.96935 3.13839 3.21377 3.26991 3.29658 3.39859 3.44241 3.47468 3.57442 3.64296 3.71344 3.85756 3.89937 3.98938 4.08493 4.16482 4.20393 4.29824 4.35441 4.37022 4.44688 4.50319 4.52415 4.55878 4.62545 4.73882 4.80983 4.90287 4.96596 5.00666 5.05045 5.18611 5.28209 5.34111 5.44835 5.48687 5.81281 6.30745 6.47564 6.55742 7.06068 7.14407 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.115 4.115 2 C -0.118 4.118 3 C 0.161 3.839 4 O -0.483 6.483 5 C -0.151 4.151 6 C -0.055 4.055 7 O -0.531 6.531 8 Si 0.677 3.323 9 C -0.044 4.044 10 C -0.139 4.139 11 C 0.562 3.438 12 O -0.529 6.529 13 N -0.717 5.717 14 C 0.126 3.874 15 H 0.120 0.880 16 C -0.147 4.147 17 C -0.121 4.121 18 H 0.111 0.889 19 C 0.141 3.859 20 N -0.378 5.378 21 C 0.253 3.747 22 N -0.547 5.547 23 C 0.199 3.801 24 N -0.317 5.317 25 C -0.137 4.137 26 C -0.066 4.066 27 H 0.073 0.927 28 H 0.071 0.929 29 H 0.078 0.922 30 H 0.393 0.607 31 H 0.112 0.888 32 H 0.378 0.622 33 H -0.255 1.255 34 H -0.249 1.249 35 H 0.145 0.855 36 H 0.400 0.600 37 H 0.087 0.913 38 H 0.075 0.925 39 H 0.093 0.907 40 H 0.103 0.897 41 H 0.217 0.783 42 H 0.217 0.783 43 H 0.084 0.916 44 H 0.091 0.909 45 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.035 -1.017 -1.769 6.371 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.171 4.171 2 C -0.118 4.118 3 C 0.115 3.885 4 O -0.294 6.294 5 C -0.152 4.152 6 C -0.166 4.166 7 O -0.336 6.336 8 Si 0.578 3.422 9 C -0.063 4.063 10 C -0.143 4.143 11 C 0.350 3.650 12 O -0.406 6.406 13 N -0.368 5.368 14 C 0.021 3.979 15 H 0.138 0.862 16 C -0.186 4.186 17 C -0.140 4.140 18 H 0.129 0.871 19 C 0.019 3.981 20 N -0.169 5.169 21 C -0.044 4.044 22 N -0.274 5.274 23 C -0.104 4.104 24 N -0.145 5.145 25 C -0.175 4.175 26 C -0.085 4.085 27 H 0.091 0.909 28 H 0.090 0.910 29 H 0.097 0.903 30 H 0.251 0.749 31 H 0.129 0.871 32 H 0.225 0.775 33 H -0.179 1.179 34 H -0.174 1.174 35 H 0.162 0.838 36 H 0.236 0.764 37 H 0.106 0.894 38 H 0.094 0.906 39 H 0.111 0.889 40 H 0.121 0.879 41 H 0.234 0.766 42 H 0.233 0.767 43 H 0.103 0.897 44 H 0.110 0.890 45 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -4.387 -0.574 -2.451 5.058 hybrid contribution -1.399 0.231 -0.635 1.554 sum -5.786 -0.343 -3.087 6.567 Atomic orbital electron populations 1.20739 0.89692 1.03899 1.02805 1.20220 0.97333 0.92101 1.02161 1.18317 0.88811 0.85301 0.96071 1.84789 1.75606 1.35676 1.33312 1.20698 0.93944 0.96080 1.04522 1.24862 1.09338 0.92809 0.89580 1.86556 1.84522 1.46643 1.15885 0.94646 0.77317 0.83893 0.86391 1.20953 1.00023 0.90161 0.95149 1.19816 0.93467 0.93418 1.07560 1.18178 0.87283 0.83639 0.75897 1.90818 1.13269 1.87469 1.49049 1.45865 1.10098 1.05321 1.75517 1.22512 0.97778 0.80837 0.96745 0.86183 1.23611 1.03387 0.94439 0.97164 1.22702 1.00375 0.93872 0.97100 0.87119 1.21858 0.93933 0.91683 0.90622 1.50554 1.21008 1.35285 1.10040 1.26095 0.99518 0.95947 0.82825 1.70569 1.06373 1.16789 1.33628 1.26064 0.98910 0.99171 0.86232 1.78040 1.01157 1.11414 1.23895 1.23373 1.00578 0.94517 0.99074 1.21080 0.92545 0.97774 0.97092 0.90868 0.91031 0.90330 0.74901 0.87068 0.77487 1.17887 1.17386 0.83756 0.76386 0.89429 0.90586 0.88900 0.87928 0.76639 0.76656 0.89731 0.89041 0.85051 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.34 9.78 36.01 0.35 0.69 16 2 C -0.12 0.15 5.89 -104.54 -0.62 -0.46 16 3 C 0.16 0.00 6.66 -39.02 -0.26 -0.26 16 4 O -0.48 0.14 11.84 -18.84 -0.22 -0.08 16 5 C -0.15 -0.03 5.27 -104.54 -0.55 -0.58 16 6 C -0.05 -0.01 2.37 36.01 0.09 0.08 16 7 O -0.53 -0.60 12.88 -35.23 -0.45 -1.05 16 8 Si 0.68 -0.01 29.91 -169.99 -5.09 -5.09 16 9 C -0.04 -0.02 8.20 -39.22 -0.32 -0.34 16 10 C -0.14 0.02 5.88 -104.96 -0.62 -0.60 16 11 C 0.56 0.50 7.76 -12.44 -0.10 0.40 16 12 O -0.53 -2.42 15.94 5.29 0.08 -2.34 16 13 N -0.72 1.69 5.31 -53.95 -0.29 1.41 16 14 C 0.13 -0.29 4.24 -67.03 -0.28 -0.57 16 15 H 0.12 -0.01 7.46 -51.93 -0.39 -0.40 16 16 C -0.15 0.39 7.45 -25.83 -0.19 0.20 16 17 C -0.12 0.40 3.86 -89.81 -0.35 0.05 16 18 H 0.11 -0.11 8.03 -51.93 -0.42 -0.53 16 19 C 0.14 -0.55 6.37 -4.04 -0.03 -0.57 16 20 N -0.38 0.13 3.69 -62.63 -0.23 -0.10 16 21 C 0.25 -0.10 12.63 -90.65 -1.14 -1.25 16 22 N -0.55 -1.44 11.19 -15.83 -0.18 -1.62 16 23 C 0.20 0.40 13.03 -91.80 -1.20 -0.79 16 24 N -0.32 -0.76 12.47 29.29 0.37 -0.40 16 25 C -0.14 0.63 7.39 -25.92 -0.19 0.43 16 26 C -0.07 0.14 9.18 -39.22 -0.36 -0.22 16 27 H 0.07 -0.28 8.14 -51.93 -0.42 -0.70 16 28 H 0.07 -0.29 8.08 -51.93 -0.42 -0.71 16 29 H 0.08 -0.15 7.52 -51.93 -0.39 -0.54 16 30 H 0.39 -1.77 9.06 45.56 0.41 -1.36 16 31 H 0.11 -0.01 7.82 -51.93 -0.41 -0.42 16 32 H 0.38 -0.94 8.70 45.56 0.40 -0.54 16 33 H -0.25 -0.63 7.11 56.52 0.40 -0.23 16 34 H -0.25 -0.71 7.11 56.52 0.40 -0.31 16 35 H 0.15 0.01 4.70 -52.49 -0.25 -0.24 16 36 H 0.40 -2.08 6.75 -40.82 -0.28 -2.36 16 37 H 0.09 -0.34 7.92 -51.93 -0.41 -0.75 16 38 H 0.08 -0.03 8.14 -51.93 -0.42 -0.46 16 39 H 0.09 -0.39 8.14 -51.93 -0.42 -0.82 16 40 H 0.10 -0.69 7.82 -51.93 -0.41 -1.10 16 41 H 0.22 -1.04 8.06 -52.48 -0.42 -1.47 16 42 H 0.22 -0.21 8.06 -52.49 -0.42 -0.63 16 43 H 0.08 -0.35 8.14 -51.92 -0.42 -0.77 16 44 H 0.09 -0.59 8.08 -51.93 -0.42 -1.01 16 45 H 0.13 -0.68 6.39 -52.49 -0.34 -1.01 16 LS Contribution 380.44 15.07 5.73 5.73 Total: 0.00 -12.62 380.44 -11.08 -23.70 By element: Atomic # 1 Polarization: -11.31 SS G_CDS: -5.04 Total: -16.35 kcal Atomic # 6 Polarization: 1.97 SS G_CDS: -5.76 Total: -3.79 kcal Atomic # 7 Polarization: -0.39 SS G_CDS: -0.33 Total: -0.72 kcal Atomic # 8 Polarization: -2.88 SS G_CDS: -0.59 Total: -3.47 kcal Atomic # 14 Polarization: -0.01 SS G_CDS: -5.09 Total: -5.09 kcal Total LS contribution 5.73 Total: 5.73 kcal Total: -12.62 -11.08 -23.70 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14644236_13287732.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 63.348 kcal (2) G-P(sol) polarization free energy of solvation -12.619 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 50.729 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.079 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.698 kcal (6) G-S(sol) free energy of system = (1) + (5) 39.650 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds