Wall clock time and date at job start Sun Mar 7 2021 00:07:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86301 * 109.46926 * 2 1 4 4 C 1.50692 * 109.47350 * 239.99837 * 2 1 3 5 5 C 1.38313 * 120.34711 * 120.01998 * 4 2 1 6 6 N 1.31957 * 121.08148 * 179.97438 * 5 4 2 7 7 C 1.31670 * 121.87900 * 359.72152 * 6 5 4 8 8 C 1.39562 * 120.56323 * 0.54668 * 7 6 5 9 9 C 1.47849 * 120.55930 * 179.74504 * 8 7 6 10 10 O 1.21541 * 119.99736 * 179.71648 * 9 8 7 11 11 N 1.34780 * 119.99718 * 359.72469 * 9 8 7 12 12 C 1.46497 * 119.99653 * 179.97438 * 11 9 8 13 13 H 1.09002 * 112.84935 * 334.66222 * 12 11 9 14 14 C 1.53786 * 113.61643 * 105.85894 * 12 11 9 15 15 C 1.54049 * 86.98426 * 140.01639 * 14 12 11 16 16 H 1.09003 * 113.61268 * 89.11946 * 15 14 12 17 17 C 1.53001 * 113.69672 * 220.01213 * 15 14 12 18 18 N 1.46509 * 109.46802 * 272.53533 * 17 15 14 19 19 C 1.34426 * 126.81968 * 125.00162 * 18 17 15 20 20 N 1.30829 * 108.07669 * 179.97438 * 19 18 17 21 21 C 1.33242 * 109.82659 * 359.97438 * 20 19 18 22 22 N 1.30711 * 108.94881 * 359.75571 * 21 20 19 23 23 C 1.53781 * 113.61305 * 203.46742 * 12 11 9 24 24 C 1.38396 * 120.34946 * 300.00216 * 4 2 1 25 25 H 0.96707 * 113.99717 * 60.00236 * 1 2 3 26 26 H 1.08996 * 109.46733 * 119.99708 * 2 1 3 27 27 H 1.48496 * 110.00117 * 59.99835 * 3 2 1 28 28 H 1.48494 * 109.99652 * 181.31715 * 3 2 1 29 29 H 1.08000 * 119.46141 * 0.02562 * 5 4 2 30 30 H 1.08002 * 119.72138 * 180.26699 * 7 6 5 31 31 H 0.96995 * 120.00200 * 359.97438 * 11 9 8 32 32 H 1.08992 * 113.61675 * 254.61383 * 14 12 11 33 33 H 1.09000 * 113.60973 * 25.51671 * 14 12 11 34 34 H 1.09002 * 109.47117 * 32.53319 * 17 15 14 35 35 H 1.08998 * 109.47421 * 152.53611 * 17 15 14 36 36 H 1.08000 * 125.96101 * 359.92380 * 19 18 17 37 37 H 1.08001 * 125.52176 * 179.97438 * 21 20 19 38 38 H 1.08999 * 113.61567 * 334.48111 * 23 12 11 39 39 H 1.09000 * 113.61379 * 105.30234 * 23 12 11 40 40 H 1.08003 * 120.85386 * 359.97438 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 2.7274 -0.0453 -2.1453 6 7 3.1756 -0.6533 -3.2272 7 6 2.8939 -1.9137 -3.4837 8 6 2.0921 -2.6531 -2.6129 9 6 1.7713 -4.0667 -2.9038 10 8 1.0762 -4.7025 -2.1358 11 7 2.2497 -4.6502 -4.0206 12 6 1.9322 -6.0511 -4.3086 13 1 1.7059 -6.6269 -3.4111 14 6 0.8978 -6.2299 -5.4324 15 6 1.7495 -7.4190 -5.9161 16 1 1.4732 -8.3688 -5.4583 17 6 1.8738 -7.5072 -7.4385 18 7 0.7486 -8.2760 -7.9766 19 6 -0.1176 -7.8797 -8.9250 20 7 -0.9721 -8.8499 -9.1255 21 6 -0.6844 -9.8775 -8.3275 22 7 0.3649 -9.5759 -7.6087 23 6 2.9484 -6.7343 -5.2389 24 6 1.6015 -2.0353 -1.4565 25 1 -0.3933 0.4417 -0.7651 26 1 1.7923 -0.5138 0.8900 27 1 1.5614 2.4679 1.2084 28 1 3.5345 1.7703 -0.0321 29 1 2.9870 0.9885 -1.9710 30 1 3.2830 -2.3781 -4.3778 31 1 2.8041 -4.1427 -4.6336 32 1 -0.0909 -6.5163 -5.0743 33 1 0.8697 -5.3981 -6.1363 34 1 1.8637 -6.5032 -7.8627 35 1 2.8094 -8.0022 -7.6986 36 1 -0.1101 -6.9263 -9.4324 37 1 -1.2278 -10.8098 -8.2844 38 1 3.4798 -6.0402 -5.8899 39 1 3.6148 -7.4266 -4.7243 40 1 0.9822 -2.5789 -0.7584 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14644236_13287814.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:07:43 Heat of formation + Delta-G solvation = 98.304592 kcal Electronic energy + Delta-G solvation = -24909.851419 eV Core-core repulsion = 21115.539730 eV Total energy + Delta-G solvation = -3794.311689 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 316.132 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -43.00268 -42.03209 -40.99343 -39.49076 -38.03350 -35.64435 -34.35169 -33.81878 -32.90994 -32.13458 -29.25776 -27.39343 -27.02106 -26.26868 -24.26854 -23.85067 -22.97778 -22.46459 -21.74222 -20.78997 -19.27484 -18.60094 -18.24110 -17.94608 -17.78762 -17.19227 -16.69151 -16.53983 -16.45681 -16.02936 -15.96946 -15.77785 -15.21808 -15.08848 -14.81045 -14.51981 -14.43997 -14.28484 -13.90056 -13.75856 -13.60199 -13.34336 -12.84486 -12.80822 -12.54793 -12.17768 -12.09643 -11.74020 -11.39819 -11.12352 -10.93000 -10.73915 -10.70983 -10.65122 -10.58743 -10.40072 -10.21500 -5.20518 -0.65791 -0.09650 0.67398 1.07390 1.28774 1.46197 1.62905 1.80314 1.88083 2.05652 2.55044 2.92639 3.11853 3.19769 3.23526 3.25902 3.31189 3.39609 3.49768 3.52720 3.62264 3.67322 3.70237 3.89067 3.98220 4.02459 4.10844 4.17310 4.29416 4.34856 4.35356 4.49699 4.57899 4.71077 4.76243 4.79136 4.83736 5.00186 5.20981 5.27846 5.31809 5.48335 5.81007 6.21971 6.38010 6.54389 6.97069 7.14115 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.065 4.065 3 Si 0.689 3.311 4 C -0.178 4.178 5 C 0.128 3.872 6 N -0.477 5.477 7 C 0.139 3.861 8 C -0.189 4.189 9 C 0.566 3.434 10 O -0.526 6.526 11 N -0.715 5.715 12 C 0.126 3.874 13 H 0.119 0.881 14 C -0.147 4.147 15 C -0.121 4.121 16 H 0.111 0.889 17 C 0.141 3.859 18 N -0.378 5.378 19 C 0.253 3.747 20 N -0.547 5.547 21 C 0.199 3.801 22 N -0.318 5.318 23 C -0.136 4.136 24 C 0.012 3.988 25 H 0.381 0.619 26 H 0.120 0.880 27 H -0.248 1.248 28 H -0.253 1.253 29 H 0.163 0.837 30 H 0.161 0.839 31 H 0.401 0.599 32 H 0.075 0.925 33 H 0.088 0.912 34 H 0.103 0.897 35 H 0.093 0.907 36 H 0.218 0.782 37 H 0.217 0.783 38 H 0.092 0.908 39 H 0.085 0.915 40 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.338 4.490 -3.670 6.691 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.176 4.176 3 Si 0.590 3.410 4 C -0.181 4.181 5 C -0.028 4.028 6 N -0.185 5.185 7 C -0.020 4.020 8 C -0.194 4.194 9 C 0.352 3.648 10 O -0.402 6.402 11 N -0.367 5.367 12 C 0.021 3.979 13 H 0.137 0.863 14 C -0.186 4.186 15 C -0.140 4.140 16 H 0.129 0.871 17 C 0.019 3.981 18 N -0.169 5.169 19 C -0.044 4.044 20 N -0.274 5.274 21 C -0.104 4.104 22 N -0.145 5.145 23 C -0.175 4.175 24 C -0.015 4.015 25 H 0.228 0.772 26 H 0.138 0.862 27 H -0.173 1.173 28 H -0.177 1.177 29 H 0.180 0.820 30 H 0.178 0.822 31 H 0.237 0.763 32 H 0.094 0.906 33 H 0.107 0.893 34 H 0.121 0.879 35 H 0.111 0.889 36 H 0.234 0.766 37 H 0.233 0.767 38 H 0.111 0.889 39 H 0.103 0.897 40 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges 4.054 4.349 -2.390 6.407 hybrid contribution -0.054 -0.659 0.305 0.728 sum 3.999 3.690 -2.084 5.827 Atomic orbital electron populations 1.86553 1.16606 1.81636 1.49287 1.25036 0.85626 1.10334 0.96629 0.94819 0.81055 0.77143 0.87986 1.21448 1.01364 0.95794 0.99475 1.22906 0.91552 0.99708 0.88636 1.67724 1.21493 1.10134 1.19130 1.23020 0.91876 0.89734 0.97322 1.21039 1.04033 0.95577 0.98786 1.18056 0.79585 0.85982 0.81139 1.90828 1.37247 1.64507 1.47621 1.45866 1.53606 1.12991 1.24221 1.22501 0.95907 0.81470 0.97991 0.86269 1.23636 0.99248 0.97569 0.98160 1.22749 0.97777 0.99957 0.93540 0.87108 1.21861 0.87053 0.95161 0.94016 1.50556 1.24625 1.11791 1.29944 1.26098 0.87184 1.00197 0.90893 1.70567 1.27853 1.01516 1.27423 1.26063 0.93507 0.99301 0.91498 1.78037 1.17477 0.94404 1.24615 1.23370 0.96514 0.99647 0.97952 1.21643 0.92651 0.92922 0.94247 0.77186 0.86235 1.17253 1.17748 0.81998 0.82204 0.76327 0.90592 0.89330 0.87864 0.88859 0.76615 0.76653 0.88906 0.89670 0.82982 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.40 12.78 -35.23 -0.45 -0.05 16 2 C -0.06 0.10 2.83 36.00 0.10 0.20 16 3 Si 0.69 -1.77 29.82 -169.99 -5.07 -6.84 16 4 C -0.18 0.16 5.39 -104.54 -0.56 -0.40 16 5 C 0.13 -0.15 9.84 -17.47 -0.17 -0.32 16 6 N -0.48 0.06 10.35 -12.91 -0.13 -0.08 16 7 C 0.14 -0.22 10.71 -17.13 -0.18 -0.40 16 8 C -0.19 0.02 5.89 -104.82 -0.62 -0.60 16 9 C 0.57 0.54 7.78 -12.33 -0.10 0.44 16 10 O -0.53 -2.68 16.04 5.33 0.09 -2.59 16 11 N -0.72 1.76 5.32 -53.96 -0.29 1.48 16 12 C 0.13 -0.28 4.21 -67.12 -0.28 -0.56 16 13 H 0.12 0.01 7.50 -51.93 -0.39 -0.38 16 14 C -0.15 0.39 7.45 -25.77 -0.19 0.19 16 15 C -0.12 0.39 3.88 -89.67 -0.35 0.04 16 16 H 0.11 -0.10 8.01 -51.93 -0.42 -0.52 16 17 C 0.14 -0.54 6.39 -4.04 -0.03 -0.57 16 18 N -0.38 0.10 3.69 -62.62 -0.23 -0.13 16 19 C 0.25 -0.09 12.63 -90.66 -1.14 -1.23 16 20 N -0.55 -1.48 11.19 -15.83 -0.18 -1.66 16 21 C 0.20 0.42 13.03 -91.81 -1.20 -0.77 16 22 N -0.32 -0.79 12.46 29.29 0.36 -0.43 16 23 C -0.14 0.62 7.39 -25.92 -0.19 0.43 16 24 C 0.01 0.01 9.31 -38.87 -0.36 -0.36 16 25 H 0.38 -1.79 8.70 45.56 0.40 -1.39 16 26 H 0.12 -0.13 7.96 -51.93 -0.41 -0.54 16 27 H -0.25 -0.21 7.11 56.52 0.40 0.19 16 28 H -0.25 0.12 7.11 56.52 0.40 0.52 16 29 H 0.16 -0.53 4.88 -52.49 -0.26 -0.79 16 30 H 0.16 -0.80 6.42 -52.49 -0.34 -1.14 16 31 H 0.40 -2.20 6.78 -40.82 -0.28 -2.48 16 32 H 0.08 -0.02 8.14 -51.93 -0.42 -0.45 16 33 H 0.09 -0.35 7.91 -51.93 -0.41 -0.76 16 34 H 0.10 -0.69 7.80 -51.93 -0.41 -1.10 16 35 H 0.09 -0.39 8.14 -51.93 -0.42 -0.81 16 36 H 0.22 -1.03 8.06 -52.49 -0.42 -1.46 16 37 H 0.22 -0.19 8.06 -52.49 -0.42 -0.61 16 38 H 0.09 -0.61 8.07 -51.93 -0.42 -1.03 16 39 H 0.08 -0.35 8.14 -51.93 -0.42 -0.78 16 40 H 0.15 0.21 7.74 -52.48 -0.41 -0.19 16 LS Contribution 344.90 15.07 5.20 5.20 Total: 0.00 -12.11 344.90 -10.62 -22.73 By element: Atomic # 1 Polarization: -9.08 SS G_CDS: -4.64 Total: -13.72 kcal Atomic # 6 Polarization: 1.37 SS G_CDS: -5.27 Total: -3.90 kcal Atomic # 7 Polarization: -0.36 SS G_CDS: -0.46 Total: -0.82 kcal Atomic # 8 Polarization: -2.27 SS G_CDS: -0.36 Total: -2.64 kcal Atomic # 14 Polarization: -1.77 SS G_CDS: -5.07 Total: -6.84 kcal Total LS contribution 5.20 Total: 5.20 kcal Total: -12.11 -10.62 -22.73 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14644236_13287814.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 121.032 kcal (2) G-P(sol) polarization free energy of solvation -12.110 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 108.922 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.617 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.727 kcal (6) G-S(sol) free energy of system = (1) + (5) 98.305 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds