Wall clock time and date at job start Sun Mar 7 2021 00:07:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50707 * 1 3 3 C 1.36414 * 125.80314 * 2 1 4 4 C 1.47383 * 127.19202 * 359.95911 * 3 2 1 5 5 O 1.21621 * 119.99692 * 359.97438 * 4 3 2 6 6 N 1.34770 * 120.00167 * 180.02562 * 4 3 2 7 7 C 1.46502 * 120.00261 * 179.97438 * 6 4 3 8 8 H 1.08997 * 112.84468 * 336.19869 * 7 6 4 9 9 C 1.53958 * 113.73944 * 107.39820 * 7 6 4 10 10 C 1.53788 * 87.01354 * 139.94768 * 9 7 6 11 11 H 1.09001 * 113.61737 * 89.23240 * 10 9 7 12 12 C 1.53003 * 113.60950 * 220.04693 * 10 9 7 13 13 N 1.46495 * 109.47179 * 274.13544 * 12 10 9 14 14 C 1.34428 * 126.82196 * 125.00293 * 13 12 10 15 15 N 1.30834 * 108.08033 * 180.02562 * 14 13 12 16 16 C 1.33241 * 109.82716 * 0.02562 * 15 14 13 17 17 N 1.30718 * 108.94820 * 359.97438 * 16 15 14 18 18 C 1.53776 * 113.61679 * 205.00049 * 7 6 4 19 19 C 1.47022 * 105.61650 * 180.22049 * 3 2 1 20 20 C 1.34173 * 105.95127 * 359.62741 * 19 3 2 21 21 C 1.50703 * 125.43750 * 180.12400 * 20 19 3 22 22 O 1.42898 * 109.47196 * 300.31833 * 21 20 19 23 23 Si 1.86302 * 109.47158 * 180.31568 * 21 20 19 24 24 O 1.33650 * 125.80055 * 179.97438 * 2 1 3 25 25 H 1.09000 * 109.46468 * 90.00228 * 1 2 3 26 26 H 1.09001 * 109.47166 * 210.00023 * 1 2 3 27 27 H 1.09001 * 109.47209 * 330.00930 * 1 2 3 28 28 H 0.97005 * 119.99855 * 359.97438 * 6 4 3 29 29 H 1.08997 * 113.61474 * 25.43069 * 9 7 6 30 30 H 1.08994 * 113.66626 * 254.47053 * 9 7 6 31 31 H 1.09004 * 109.46516 * 154.13806 * 12 10 9 32 32 H 1.09000 * 109.47268 * 34.13750 * 12 10 9 33 33 H 1.08001 * 125.96487 * 0.02562 * 14 13 12 34 34 H 1.08002 * 125.52885 * 180.02562 * 16 15 14 35 35 H 1.08991 * 113.61495 * 105.38708 * 18 7 6 36 36 H 1.09003 * 113.68793 * 334.49511 * 18 7 6 37 37 H 1.07993 * 127.02182 * 179.74416 * 19 3 2 38 38 H 1.08998 * 109.46677 * 60.31611 * 21 20 19 39 39 H 0.96703 * 114.00073 * 299.99870 * 22 21 20 40 40 H 1.48507 * 109.99669 * 179.97438 * 23 21 20 41 41 H 1.48492 * 110.00439 * 301.32040 * 23 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.3051 1.1064 0.0000 4 6 1.8741 2.5158 -0.0008 5 8 0.6890 2.7892 -0.0021 6 7 2.7931 3.5015 -0.0012 7 6 2.3647 4.9025 -0.0026 8 1 1.3622 5.0380 -0.4086 9 6 2.5857 5.6196 1.3417 10 6 3.0264 6.8451 0.5237 11 1 2.2059 7.5128 0.2611 12 6 4.2246 7.5836 1.1236 13 7 3.7543 8.5488 2.1203 14 6 4.1440 8.6360 3.4039 15 7 3.4926 9.6253 3.9596 16 6 2.6812 10.1904 3.0665 17 7 2.8061 9.5662 1.9248 18 6 3.4059 5.8645 -0.5984 19 6 3.6850 0.5990 -0.0054 20 6 3.5859 -0.7390 0.0002 21 6 4.7459 -1.7011 0.0004 22 8 5.5430 -1.4864 -1.1660 23 14 4.1026 -3.4495 -0.0002 24 8 2.2889 -1.0840 0.0005 25 1 -0.3632 0.0000 -1.0277 26 1 -0.3633 -0.8900 0.5138 27 1 -0.3634 0.8901 0.5137 28 1 3.7383 3.2834 -0.0006 29 1 3.3849 5.1850 1.9421 30 1 1.6685 5.7796 1.9082 31 1 4.7602 8.1093 0.3331 32 1 4.8926 6.8658 1.5998 33 1 4.8684 8.0004 3.8915 34 1 2.0271 11.0289 3.2551 35 1 3.1498 6.2220 -1.5957 36 1 4.4302 5.4981 -0.5302 37 1 4.5928 1.1839 -0.0108 38 1 5.3532 -1.5377 0.8906 39 1 5.0660 -1.6146 -1.9974 40 1 5.2369 -4.4080 -0.0007 41 1 3.2461 -3.6761 1.1915 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14644236_13308374.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:07:47 Heat of formation + Delta-G solvation = 70.296121 kcal Electronic energy + Delta-G solvation = -25838.779361 eV Core-core repulsion = 21918.222993 eV Total energy + Delta-G solvation = -3920.556368 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 319.136 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -43.78806 -42.98290 -41.14762 -39.45492 -38.15197 -35.52381 -34.39835 -33.75392 -33.07429 -32.11783 -29.66421 -29.03610 -26.96171 -26.17590 -24.94875 -23.76269 -22.95994 -22.62353 -21.76104 -21.27252 -20.28929 -18.98219 -18.44956 -17.99974 -17.72312 -17.36974 -16.84994 -16.66391 -16.34235 -16.07711 -15.94703 -15.69595 -15.63669 -15.10229 -14.80820 -14.52110 -14.28872 -14.24584 -14.06604 -13.90593 -13.79630 -13.69284 -13.31094 -12.96439 -12.87185 -12.79937 -12.44540 -12.19598 -12.04488 -11.68865 -11.04175 -10.93233 -10.90432 -10.72298 -10.70320 -10.57122 -10.12282 -9.60031 -5.12194 0.25833 0.69078 0.78384 1.06197 1.30864 1.35872 1.69792 1.85083 2.06934 2.11599 2.29165 3.08837 3.17728 3.25543 3.30109 3.32448 3.41205 3.56864 3.71347 3.71926 3.75602 3.93058 4.00725 4.07445 4.17057 4.20432 4.31792 4.36494 4.40985 4.51263 4.54455 4.58212 4.65725 4.76401 4.78201 4.83678 5.04824 5.11429 5.17504 5.29567 5.44181 5.50044 5.82672 5.86794 6.27656 6.43561 7.15621 7.18313 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 C 0.097 3.903 3 C -0.255 4.255 4 C 0.594 3.406 5 O -0.538 6.538 6 N -0.714 5.714 7 C 0.128 3.872 8 H 0.119 0.881 9 C -0.148 4.148 10 C -0.120 4.120 11 H 0.110 0.890 12 C 0.141 3.859 13 N -0.378 5.378 14 C 0.253 3.747 15 N -0.547 5.547 16 C 0.199 3.801 17 N -0.317 5.317 18 C -0.136 4.136 19 C -0.149 4.149 20 C -0.056 4.056 21 C -0.027 4.027 22 O -0.530 6.530 23 Si 0.703 3.297 24 O -0.168 6.168 25 H 0.094 0.906 26 H 0.081 0.919 27 H 0.110 0.890 28 H 0.401 0.599 29 H 0.086 0.914 30 H 0.074 0.926 31 H 0.093 0.907 32 H 0.102 0.898 33 H 0.217 0.783 34 H 0.217 0.783 35 H 0.084 0.916 36 H 0.091 0.909 37 H 0.158 0.842 38 H 0.133 0.867 39 H 0.384 0.616 40 H -0.246 1.246 41 H -0.253 1.253 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.051 -3.277 -2.901 5.335 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.143 4.143 2 C 0.043 3.957 3 C -0.259 4.259 4 C 0.383 3.617 5 O -0.417 6.417 6 N -0.365 5.365 7 C 0.023 3.977 8 H 0.137 0.863 9 C -0.186 4.186 10 C -0.140 4.140 11 H 0.129 0.871 12 C 0.019 3.981 13 N -0.168 5.168 14 C -0.044 4.044 15 N -0.274 5.274 16 C -0.104 4.104 17 N -0.145 5.145 18 C -0.175 4.175 19 C -0.168 4.168 20 C -0.104 4.104 21 C -0.138 4.138 22 O -0.336 6.336 23 Si 0.602 3.398 24 O -0.065 6.065 25 H 0.112 0.888 26 H 0.100 0.900 27 H 0.129 0.871 28 H 0.236 0.764 29 H 0.105 0.895 30 H 0.093 0.907 31 H 0.111 0.889 32 H 0.121 0.879 33 H 0.233 0.767 34 H 0.233 0.767 35 H 0.102 0.898 36 H 0.110 0.890 37 H 0.175 0.825 38 H 0.150 0.850 39 H 0.232 0.768 40 H -0.170 1.170 41 H -0.177 1.177 Dipole moment (debyes) X Y Z Total from point charges 2.216 -3.794 -2.402 5.008 hybrid contribution 1.026 0.522 0.380 1.212 sum 3.243 -3.272 -2.022 5.031 Atomic orbital electron populations 1.20712 0.83300 1.05449 1.04856 1.22936 0.94096 0.82849 0.95803 1.21119 0.93246 0.93786 1.17780 1.17212 0.85463 0.83764 0.75274 1.90786 1.16551 1.84001 1.50315 1.45730 1.09609 1.05535 1.75591 1.22474 0.99969 0.78678 0.96607 0.86289 1.23611 1.02574 0.95218 0.97238 1.22701 0.98517 0.95645 0.97147 0.87143 1.21866 0.96279 0.89265 0.90704 1.50554 1.31139 1.25014 1.10134 1.26092 0.98665 0.96759 0.82891 1.70566 1.12436 1.10818 1.33567 1.26063 0.98084 1.00059 0.86211 1.78040 1.10008 1.02556 1.23896 1.23364 0.99725 0.95389 0.99027 1.22551 0.96393 0.93505 1.04378 1.22623 0.82950 0.95644 1.09187 1.24400 0.89739 1.07533 0.92126 1.86558 1.38252 1.93398 1.15381 0.94173 0.82134 0.74077 0.89371 1.83679 1.16353 1.35044 1.71404 0.88794 0.89977 0.87132 0.76387 0.89519 0.90706 0.88879 0.87940 0.76656 0.76650 0.89753 0.89043 0.82477 0.85000 0.76752 1.17046 1.17695 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 0.04 9.89 36.01 0.36 0.40 16 2 C 0.10 0.11 7.37 -34.96 -0.26 -0.15 16 3 C -0.25 -0.32 6.31 -103.27 -0.65 -0.97 16 4 C 0.59 1.22 7.81 -12.54 -0.10 1.12 16 5 O -0.54 -2.71 14.45 5.26 0.08 -2.64 16 6 N -0.71 0.74 5.36 -54.02 -0.29 0.45 16 7 C 0.13 -0.17 4.24 -67.03 -0.28 -0.45 16 8 H 0.12 0.09 7.46 -51.93 -0.39 -0.30 16 9 C -0.15 0.26 7.45 -25.82 -0.19 0.07 16 10 C -0.12 0.31 3.86 -89.80 -0.35 -0.04 16 11 H 0.11 -0.05 8.03 -51.93 -0.42 -0.46 16 12 C 0.14 -0.45 6.37 -4.04 -0.03 -0.48 16 13 N -0.38 -0.08 3.69 -62.63 -0.23 -0.31 16 14 C 0.25 0.03 12.63 -90.65 -1.14 -1.12 16 15 N -0.55 -1.67 11.19 -15.83 -0.18 -1.85 16 16 C 0.20 0.48 13.03 -91.81 -1.20 -0.72 16 17 N -0.32 -0.90 12.47 29.29 0.37 -0.54 16 18 C -0.14 0.51 7.40 -25.92 -0.19 0.31 16 19 C -0.15 0.06 10.46 -37.46 -0.39 -0.33 16 20 C -0.06 0.02 6.20 -35.74 -0.22 -0.20 16 21 C -0.03 0.05 2.97 36.01 0.11 0.15 16 22 O -0.53 0.92 12.86 -35.23 -0.45 0.47 16 23 Si 0.70 -1.22 32.09 -169.99 -5.45 -6.67 16 24 O -0.17 -0.11 8.89 7.66 0.07 -0.04 16 25 H 0.09 -0.14 8.14 -51.93 -0.42 -0.56 16 26 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 27 H 0.11 0.10 6.49 -51.93 -0.34 -0.23 16 28 H 0.40 -1.37 7.90 -40.82 -0.32 -1.69 16 29 H 0.09 -0.24 7.92 -51.93 -0.41 -0.65 16 30 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 31 H 0.09 -0.34 8.14 -51.93 -0.42 -0.76 16 32 H 0.10 -0.61 7.82 -51.93 -0.41 -1.02 16 33 H 0.22 -0.92 8.06 -52.49 -0.42 -1.35 16 34 H 0.22 -0.14 8.06 -52.49 -0.42 -0.56 16 35 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 36 H 0.09 -0.49 8.08 -51.93 -0.42 -0.91 16 37 H 0.16 -0.40 7.74 -52.49 -0.41 -0.81 16 38 H 0.13 -0.28 7.96 -51.93 -0.41 -0.69 16 39 H 0.38 -2.05 8.70 45.56 0.40 -1.65 16 40 H -0.25 -0.19 7.11 56.52 0.40 0.21 16 41 H -0.25 -0.35 7.11 56.52 0.40 0.06 16 LS Contribution 356.12 15.07 5.37 5.37 Total: 0.00 -10.70 356.12 -10.55 -21.25 By element: Atomic # 1 Polarization: -7.79 SS G_CDS: -5.28 Total: -13.07 kcal Atomic # 6 Polarization: 2.13 SS G_CDS: -4.54 Total: -2.41 kcal Atomic # 7 Polarization: -1.91 SS G_CDS: -0.33 Total: -2.24 kcal Atomic # 8 Polarization: -1.90 SS G_CDS: -0.31 Total: -2.21 kcal Atomic # 14 Polarization: -1.22 SS G_CDS: -5.45 Total: -6.67 kcal Total LS contribution 5.37 Total: 5.37 kcal Total: -10.70 -10.55 -21.25 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14644236_13308374.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 91.543 kcal (2) G-P(sol) polarization free energy of solvation -10.697 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 80.846 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.550 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.247 kcal (6) G-S(sol) free energy of system = (1) + (5) 70.296 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds