Wall clock time and date at job start Sun Mar 7 2021 00:07:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.37787 * 119.85094 * 2 1 4 4 C 1.39703 * 119.90757 * 180.30325 * 3 2 1 5 5 C 1.47539 * 120.19056 * 179.69778 * 4 3 2 6 6 O 1.21597 * 119.99766 * 179.72219 * 5 4 3 7 7 N 1.34775 * 120.00126 * 359.71767 * 5 4 3 8 8 C 1.46501 * 119.99930 * 180.02562 * 7 5 4 9 9 H 1.08995 * 112.85197 * 336.19831 * 8 7 5 10 10 C 1.53782 * 113.68683 * 107.46689 * 8 7 5 11 11 C 1.53776 * 87.08009 * 139.99195 * 10 8 7 12 12 H 1.09003 * 113.69332 * 89.12939 * 11 10 8 13 13 C 1.53006 * 113.61554 * 220.01694 * 11 10 8 14 14 N 1.46504 * 109.46883 * 272.49982 * 13 11 10 15 15 C 1.34430 * 126.82120 * 124.71125 * 14 13 11 16 16 N 1.30835 * 108.07516 * 179.88705 * 15 14 13 17 17 C 1.33237 * 109.82650 * 0.38078 * 16 15 14 18 18 N 1.30708 * 108.95196 * 359.76213 * 17 16 15 19 19 C 1.53779 * 113.61412 * 205.00118 * 8 7 5 20 20 C 1.40140 * 119.61702 * 359.41235 * 4 3 2 21 21 O 1.35656 * 120.14976 * 180.30333 * 20 4 3 22 22 C 1.38711 * 119.70086 * 0.28815 * 20 4 3 23 23 C 1.50697 * 119.95999 * 180.02562 * 22 20 4 24 24 O 1.42895 * 109.46907 * 284.99726 * 23 22 20 25 25 Si 1.86300 * 109.47150 * 164.99510 * 23 22 20 26 26 C 1.38059 * 120.08110 * 359.97438 * 22 20 4 27 27 H 1.09008 * 109.47303 * 270.30444 * 1 2 3 28 28 H 1.08991 * 109.47284 * 30.30282 * 1 2 3 29 29 H 1.08997 * 109.47267 * 150.30719 * 1 2 3 30 30 H 1.07996 * 120.04569 * 0.02562 * 3 2 1 31 31 H 0.96997 * 119.99914 * 0.02562 * 7 5 4 32 32 H 1.09004 * 113.61971 * 25.44070 * 10 8 7 33 33 H 1.09005 * 113.61642 * 254.54205 * 10 8 7 34 34 H 1.09001 * 109.47002 * 32.49479 * 13 11 10 35 35 H 1.08993 * 109.46955 * 152.49916 * 13 11 10 36 36 H 1.07998 * 125.96346 * 0.03285 * 15 14 13 37 37 H 1.08001 * 125.52307 * 179.79519 * 17 16 15 38 38 H 1.08996 * 113.61570 * 105.38927 * 19 8 7 39 39 H 1.09004 * 113.69064 * 334.49015 * 19 8 7 40 40 H 0.96695 * 114.00403 * 90.00355 * 21 20 4 41 41 H 1.09000 * 109.46779 * 44.99738 * 23 22 20 42 42 H 0.96704 * 113.99701 * 179.97438 * 24 23 22 43 43 H 1.48502 * 109.99913 * 60.00067 * 25 23 22 44 44 H 1.48501 * 109.99937 * 181.31807 * 25 23 22 45 45 H 1.07998 * 119.80351 * 180.02562 * 26 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1928 1.1951 0.0000 4 6 3.5898 1.1965 -0.0064 5 6 4.3305 2.4725 -0.0132 6 8 5.5465 2.4696 -0.0136 7 7 3.6593 3.6412 -0.0189 8 6 4.3948 4.9082 -0.0262 9 1 5.4024 4.8151 0.3789 10 6 4.3385 5.6475 -1.3735 11 6 4.1908 6.9471 -0.5647 12 1 5.1419 7.4126 -0.3063 13 6 3.1908 7.9349 -1.1691 14 7 3.8749 8.7864 -2.1455 15 6 3.5368 8.9666 -3.4341 16 7 4.3930 9.8011 -3.9654 17 6 5.2928 10.1671 -3.0535 18 7 5.0176 9.5719 -1.9228 19 6 3.6001 6.0852 0.5636 20 6 4.2837 -0.0211 -0.0003 21 8 5.6402 -0.0323 -0.0002 22 6 3.5771 -1.2148 0.0060 23 6 4.3172 -2.5274 0.0131 24 8 4.8551 -2.7780 -1.2868 25 14 3.1443 -3.8992 0.4750 26 6 2.1965 -1.2017 0.0067 27 1 -0.3634 0.0055 1.0277 28 1 -0.3633 0.8872 -0.5185 29 1 -0.3633 -0.8927 -0.5090 30 1 1.6512 2.1294 0.0004 31 1 2.6894 3.6434 -0.0183 32 1 3.4597 5.4021 -1.9699 33 1 5.2666 5.5902 -1.9422 34 1 2.3907 7.3847 -1.6644 35 1 2.7696 8.5552 -0.3781 36 1 2.7026 8.5051 -3.9414 37 1 6.1158 10.8460 -3.2213 38 1 3.9321 6.3812 1.5586 39 1 2.5192 5.9607 0.4975 40 1 6.0335 -0.0312 0.8831 41 1 5.1285 -2.4830 0.7397 42 1 5.3461 -3.6083 -1.3559 43 1 2.0335 -3.9701 -0.5079 44 1 3.8691 -5.1946 0.5167 45 1 1.6509 -2.1337 0.0120 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14644236_13422088.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:07:58 Heat of formation + Delta-G solvation = 44.450186 kcal Electronic energy + Delta-G solvation = -29403.720353 eV Core-core repulsion = 25198.279462 eV Total energy + Delta-G solvation = -4205.440891 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.152 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -42.97349 -41.79525 -40.77700 -39.24645 -38.03317 -37.66147 -35.47730 -34.21829 -33.23040 -32.61790 -32.10593 -29.16579 -27.68828 -26.94973 -26.82473 -25.72553 -23.95298 -22.94998 -22.39739 -21.87012 -21.49042 -20.63165 -19.50566 -18.56832 -18.50616 -18.22556 -17.75874 -17.06589 -16.76865 -16.54179 -16.33516 -16.02791 -15.82757 -15.77920 -15.42051 -15.15831 -15.00741 -14.93210 -14.61149 -14.48396 -14.11840 -13.88192 -13.78239 -13.69226 -13.30451 -13.24219 -13.05278 -12.83689 -12.74150 -12.45915 -12.42671 -12.04458 -11.85179 -11.67874 -11.66127 -10.90929 -10.80049 -10.70137 -10.56759 -10.46510 -10.21304 -10.03422 -9.53766 -5.07548 -0.34754 0.03760 0.70174 1.16075 1.32051 1.48590 1.73695 1.84851 2.03996 2.08404 2.54046 3.12017 3.17739 3.25584 3.26445 3.31604 3.42374 3.50327 3.55006 3.63423 3.72563 3.76225 3.93037 3.99796 4.01499 4.04906 4.18694 4.23968 4.32053 4.34199 4.41320 4.53873 4.54662 4.55610 4.64483 4.69774 4.79128 4.86135 4.90454 4.93974 5.08673 5.17118 5.29293 5.30724 5.43456 5.51166 5.55851 5.83867 6.40979 6.43271 6.74789 7.16805 7.20224 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.116 4.116 2 C -0.097 4.097 3 C -0.067 4.067 4 C -0.166 4.166 5 C 0.561 3.439 6 O -0.516 6.516 7 N -0.719 5.719 8 C 0.128 3.872 9 H 0.119 0.881 10 C -0.148 4.148 11 C -0.121 4.121 12 H 0.110 0.890 13 C 0.141 3.859 14 N -0.378 5.378 15 C 0.253 3.747 16 N -0.547 5.547 17 C 0.199 3.801 18 N -0.317 5.317 19 C -0.136 4.136 20 C 0.191 3.809 21 O -0.468 6.468 22 C -0.106 4.106 23 C -0.067 4.067 24 O -0.527 6.527 25 Si 0.685 3.315 26 C -0.075 4.075 27 H 0.077 0.923 28 H 0.070 0.930 29 H 0.070 0.930 30 H 0.131 0.869 31 H 0.399 0.601 32 H 0.087 0.913 33 H 0.074 0.926 34 H 0.103 0.897 35 H 0.093 0.907 36 H 0.217 0.783 37 H 0.217 0.783 38 H 0.084 0.916 39 H 0.091 0.909 40 H 0.393 0.607 41 H 0.075 0.925 42 H 0.379 0.621 43 H -0.253 1.253 44 H -0.259 1.259 45 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.547 -2.131 5.530 9.596 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.098 4.098 3 C -0.086 4.086 4 C -0.170 4.170 5 C 0.349 3.651 6 O -0.392 6.392 7 N -0.372 5.372 8 C 0.023 3.977 9 H 0.137 0.863 10 C -0.187 4.187 11 C -0.141 4.141 12 H 0.129 0.871 13 C 0.019 3.981 14 N -0.169 5.169 15 C -0.044 4.044 16 N -0.274 5.274 17 C -0.104 4.104 18 N -0.145 5.145 19 C -0.175 4.175 20 C 0.144 3.856 21 O -0.279 6.279 22 C -0.107 4.107 23 C -0.177 4.177 24 O -0.334 6.334 25 Si 0.586 3.414 26 C -0.093 4.093 27 H 0.096 0.904 28 H 0.089 0.911 29 H 0.089 0.911 30 H 0.149 0.851 31 H 0.235 0.765 32 H 0.105 0.895 33 H 0.093 0.907 34 H 0.121 0.879 35 H 0.111 0.889 36 H 0.234 0.766 37 H 0.233 0.767 38 H 0.102 0.898 39 H 0.109 0.891 40 H 0.252 0.748 41 H 0.093 0.907 42 H 0.227 0.773 43 H -0.178 1.178 44 H -0.184 1.184 45 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -6.984 -2.158 4.944 8.825 hybrid contribution 0.317 -0.431 -0.454 0.702 sum -6.667 -2.590 4.491 8.445 Atomic orbital electron populations 1.20829 0.89968 1.03449 1.03034 1.19771 0.96779 0.92187 1.01020 1.21095 0.92076 0.98238 0.97169 1.20340 0.93944 0.93367 1.09309 1.18068 0.87333 0.83387 0.76341 1.90842 1.13042 1.87248 1.48038 1.45869 1.09977 1.05260 1.76049 1.22428 0.97712 0.80927 0.96622 0.86331 1.23592 1.03342 0.94477 0.97298 1.22709 1.00359 0.93850 0.97135 0.87138 1.21868 0.93779 0.91201 0.91235 1.50557 1.21728 1.34609 1.09975 1.26094 0.99436 0.95807 0.83053 1.70565 1.06708 1.16691 1.33417 1.26058 0.99015 0.99192 0.86134 1.78033 1.01465 1.10979 1.24037 1.23371 1.00567 0.94554 0.98994 1.18225 0.83841 0.89735 0.93794 1.84804 1.14204 1.95883 1.32965 1.19610 0.93419 0.93527 1.04101 1.24642 1.03288 1.01263 0.88468 1.86651 1.73304 1.44309 1.29183 0.95234 0.79965 0.76840 0.89358 1.21124 0.92791 0.98579 0.96779 0.90412 0.91097 0.91073 0.85138 0.76538 0.89468 0.90702 0.87932 0.88879 0.76644 0.76657 0.89772 0.89052 0.74844 0.90736 0.77275 1.17830 1.18372 0.84629 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.42 10.00 36.01 0.36 0.78 16 2 C -0.10 0.13 5.87 -104.67 -0.61 -0.49 16 3 C -0.07 0.09 9.18 -39.20 -0.36 -0.27 16 4 C -0.17 -0.24 5.89 -104.84 -0.62 -0.86 16 5 C 0.56 1.38 7.76 -12.47 -0.10 1.28 16 6 O -0.52 -3.27 14.76 -16.60 -0.24 -3.51 16 7 N -0.72 0.86 5.31 -54.06 -0.29 0.57 16 8 C 0.13 -0.16 4.24 -67.12 -0.28 -0.44 16 9 H 0.12 0.12 7.46 -51.93 -0.39 -0.27 16 10 C -0.15 0.23 7.43 -25.92 -0.19 0.03 16 11 C -0.12 0.30 3.88 -89.81 -0.35 -0.05 16 12 H 0.11 -0.03 8.00 -51.93 -0.42 -0.44 16 13 C 0.14 -0.46 6.39 -4.04 -0.03 -0.49 16 14 N -0.38 -0.10 3.69 -62.63 -0.23 -0.33 16 15 C 0.25 0.05 12.63 -90.65 -1.14 -1.10 16 16 N -0.55 -1.75 11.19 -15.83 -0.18 -1.92 16 17 C 0.20 0.51 13.03 -91.82 -1.20 -0.69 16 18 N -0.32 -0.94 12.45 29.29 0.36 -0.57 16 19 C -0.14 0.53 7.39 -25.92 -0.19 0.34 16 20 C 0.19 0.50 6.69 -38.69 -0.26 0.24 16 21 O -0.47 -1.67 10.91 -40.55 -0.44 -2.11 16 22 C -0.11 -0.13 5.30 -104.51 -0.55 -0.69 16 23 C -0.07 -0.01 2.37 36.00 0.09 0.07 16 24 O -0.53 -1.24 12.86 -35.23 -0.45 -1.69 16 25 Si 0.69 -1.00 30.19 -169.99 -5.13 -6.13 16 26 C -0.07 0.02 8.30 -39.53 -0.33 -0.31 16 27 H 0.08 -0.36 8.14 -51.92 -0.42 -0.78 16 28 H 0.07 -0.32 8.08 -51.93 -0.42 -0.74 16 29 H 0.07 -0.25 8.08 -51.93 -0.42 -0.67 16 30 H 0.13 -0.59 6.40 -52.49 -0.34 -0.92 16 31 H 0.40 -1.66 6.76 -40.82 -0.28 -1.93 16 32 H 0.09 -0.24 7.90 -51.93 -0.41 -0.65 16 33 H 0.07 0.07 8.14 -51.93 -0.42 -0.35 16 34 H 0.10 -0.62 7.79 -51.93 -0.40 -1.03 16 35 H 0.09 -0.35 8.14 -51.93 -0.42 -0.77 16 36 H 0.22 -0.91 8.06 -52.49 -0.42 -1.33 16 37 H 0.22 -0.11 8.06 -52.49 -0.42 -0.53 16 38 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 39 H 0.09 -0.54 8.08 -51.93 -0.42 -0.96 16 40 H 0.39 -0.19 9.06 45.56 0.41 0.23 16 41 H 0.07 -0.11 7.83 -51.93 -0.41 -0.51 16 42 H 0.38 -0.67 8.74 45.56 0.40 -0.27 16 43 H -0.25 -0.28 6.75 56.52 0.38 0.10 16 44 H -0.26 -0.18 7.11 56.52 0.40 0.22 16 45 H 0.14 -0.22 4.87 -52.49 -0.26 -0.47 16 LS Contribution 379.29 15.07 5.72 5.72 Total: 0.00 -13.67 379.29 -11.75 -25.42 By element: Atomic # 1 Polarization: -7.72 SS G_CDS: -5.09 Total: -12.82 kcal Atomic # 6 Polarization: 3.14 SS G_CDS: -5.77 Total: -2.63 kcal Atomic # 7 Polarization: -1.92 SS G_CDS: -0.33 Total: -2.26 kcal Atomic # 8 Polarization: -6.17 SS G_CDS: -1.14 Total: -7.31 kcal Atomic # 14 Polarization: -1.00 SS G_CDS: -5.13 Total: -6.13 kcal Total LS contribution 5.72 Total: 5.72 kcal Total: -13.67 -11.75 -25.42 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14644236_13422088.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 69.873 kcal (2) G-P(sol) polarization free energy of solvation -13.674 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 56.199 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.749 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.423 kcal (6) G-S(sol) free energy of system = (1) + (5) 44.450 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds