Wall clock time and date at job start Sun Mar 7 2021 00:08:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46901 * 1 3 3 C 1.46898 * 111.00443 * 2 1 4 4 C 1.39043 * 110.99815 * 236.04799 * 2 1 3 5 5 C 1.39206 * 119.92937 * 239.73104 * 4 2 1 6 6 C 1.50693 * 119.96798 * 359.97310 * 5 4 2 7 7 O 1.42906 * 109.46958 * 75.00154 * 6 5 4 8 8 Si 1.86295 * 109.47443 * 195.00119 * 6 5 4 9 9 C 1.37634 * 120.06756 * 179.72322 * 5 4 2 10 10 C 1.39785 * 119.92582 * 0.54888 * 9 5 4 11 11 C 1.47520 * 120.06381 * 179.70489 * 10 9 5 12 12 O 1.21594 * 120.00407 * 0.02562 * 11 10 9 13 13 N 1.34775 * 120.00129 * 180.02562 * 11 10 9 14 14 C 1.46502 * 120.00356 * 179.97438 * 13 11 10 15 15 H 1.08998 * 112.84716 * 334.66440 * 14 13 11 16 16 C 1.53774 * 113.61439 * 105.86177 * 14 13 11 17 17 C 1.53956 * 87.02001 * 139.94982 * 16 14 13 18 18 H 1.09001 * 113.60967 * 89.19753 * 17 16 14 19 19 C 1.53001 * 113.66889 * 220.06307 * 17 16 14 20 20 N 1.46496 * 109.47413 * 272.56160 * 19 17 16 21 21 C 1.34427 * 126.82316 * 124.70764 * 20 19 17 22 22 N 1.30831 * 108.07854 * 179.89562 * 21 20 19 23 23 C 1.33244 * 109.82834 * 0.38174 * 22 21 20 24 24 N 1.30715 * 108.94263 * 359.76397 * 23 22 21 25 25 C 1.53779 * 87.11071 * 334.63876 * 17 16 14 26 26 C 1.39802 * 119.86563 * 359.72133 * 10 9 5 27 27 C 1.37590 * 119.93445 * 0.02562 * 26 10 9 28 28 H 1.09002 * 109.47401 * 183.95136 * 1 2 3 29 29 H 1.09001 * 109.46874 * 63.95149 * 1 2 3 30 30 H 1.09004 * 109.46970 * 303.95282 * 1 2 3 31 31 H 1.09007 * 109.46909 * 60.00094 * 3 2 1 32 32 H 1.08998 * 109.47110 * 179.97438 * 3 2 1 33 33 H 1.09002 * 109.47061 * 300.00284 * 3 2 1 34 34 H 1.09001 * 109.47417 * 315.00615 * 6 5 4 35 35 H 0.96698 * 113.99968 * 60.00207 * 7 6 5 36 36 H 1.48507 * 109.99776 * 58.68457 * 8 6 5 37 37 H 1.48502 * 110.00176 * 180.02562 * 8 6 5 38 38 H 1.07995 * 120.03437 * 180.25105 * 9 5 4 39 39 H 0.97002 * 119.99415 * 359.97438 * 13 11 10 40 40 H 1.09000 * 113.61776 * 254.52863 * 16 14 13 41 41 H 1.09001 * 113.61435 * 25.43227 * 16 14 13 42 42 H 1.09004 * 109.46932 * 32.56483 * 19 17 16 43 43 H 1.09002 * 109.46843 * 152.56011 * 19 17 16 44 44 H 1.08003 * 125.96171 * 0.03878 * 21 20 19 45 45 H 1.07994 * 125.52387 * 179.72567 * 23 22 21 46 46 H 1.09003 * 113.61413 * 270.80979 * 25 17 16 47 47 H 1.08999 * 113.61721 * 139.91273 * 25 17 16 48 48 H 1.08004 * 120.03724 * 179.97438 * 26 10 9 49 49 H 1.08001 * 119.97077 * 179.97438 * 27 26 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9956 1.3714 0.0000 4 6 1.9673 -0.7250 -1.0768 5 6 2.7839 -1.8297 -0.8520 6 6 3.1270 -2.2377 0.5575 7 8 1.9957 -2.8708 1.1589 8 14 4.5611 -3.4265 0.5282 9 6 3.2740 -2.5528 -1.9156 10 6 2.9603 -2.1699 -3.2228 11 6 3.4893 -2.9389 -4.3652 12 8 4.1985 -3.9071 -4.1703 13 7 3.1864 -2.5682 -5.6252 14 6 3.7122 -3.3315 -6.7597 15 1 4.6352 -3.8605 -6.5226 16 6 2.6580 -4.2117 -7.4515 17 6 3.3010 -3.7931 -8.7862 18 1 4.1113 -4.4488 -9.1051 19 6 2.2860 -3.5191 -9.8978 20 7 1.9797 -4.7687 -10.5983 21 6 0.7635 -5.3099 -10.7860 22 7 0.9136 -6.4226 -11.4575 23 6 2.2059 -6.6284 -11.7083 24 7 2.8987 -5.6425 -11.2018 25 6 3.7837 -2.5230 -8.0659 26 6 2.1445 -1.0566 -3.4454 27 6 1.6534 -0.3409 -2.3778 28 1 -0.3634 -1.0252 0.0708 29 1 -0.3633 0.4513 -0.9233 30 1 -0.3633 0.5740 0.8525 31 1 1.6461 1.8947 0.8901 32 1 3.0851 1.3422 0.0005 33 1 1.6460 1.8948 -0.8900 34 1 3.3990 -1.3545 1.1355 35 1 1.6978 -3.6659 0.6962 36 1 5.7344 -2.7910 -0.1235 37 1 4.9089 -3.8370 1.9124 38 1 3.9041 -3.4122 -1.7404 39 1 2.6203 -1.7961 -5.7807 40 1 2.7623 -5.2738 -7.2297 41 1 1.6373 -3.8504 -7.3263 42 1 1.3725 -3.1126 -9.4635 43 1 2.7042 -2.8005 -10.6027 44 1 -0.1741 -4.8969 -10.4442 45 1 2.6147 -7.4732 -12.2427 46 1 3.0713 -1.6991 -8.1090 47 1 4.7955 -2.2237 -8.3394 48 1 1.9007 -0.7580 -4.4543 49 1 1.0234 0.5195 -2.5491 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14644236_13422196.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:08:03 Heat of formation + Delta-G solvation = 102.846000 kcal Electronic energy + Delta-G solvation = -31238.513805 eV Core-core repulsion = 26977.786189 eV Total energy + Delta-G solvation = -4260.727616 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.179 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -42.99925 -41.82155 -40.97530 -39.58274 -37.82360 -37.20881 -35.58877 -34.20335 -32.73726 -32.13227 -31.37075 -29.18996 -28.67815 -27.00042 -26.92723 -26.43467 -24.53969 -23.28782 -22.97559 -22.88319 -22.27849 -21.39375 -20.69541 -19.12267 -18.46302 -17.94744 -17.70798 -17.51041 -16.84939 -16.65437 -16.46830 -16.23371 -16.12777 -15.91622 -15.85739 -15.55239 -15.36779 -15.10803 -14.93958 -14.82343 -14.58482 -14.20060 -13.97216 -13.87899 -13.75121 -13.63500 -13.37232 -13.19568 -13.05720 -12.80696 -12.76730 -12.60836 -12.50935 -12.12522 -12.04681 -11.92726 -11.71129 -11.02942 -10.91716 -10.72996 -10.59236 -10.33897 -10.22555 -10.17792 -9.84751 -9.60837 -4.93562 -0.42777 0.07424 0.67634 1.29251 1.35126 1.63936 1.72839 1.96503 2.04358 2.05896 2.58699 2.69284 3.13148 3.21618 3.27834 3.39767 3.42058 3.49702 3.58200 3.61069 3.71826 3.73523 3.90204 3.92113 3.98877 4.03110 4.15513 4.17451 4.20868 4.30257 4.34825 4.36907 4.42946 4.47922 4.51580 4.58145 4.59422 4.72423 4.75178 4.79729 4.81511 4.87910 4.94960 5.01807 5.06610 5.18692 5.28210 5.35964 5.48651 5.48744 5.72041 5.81271 6.19964 6.32615 6.68113 7.08186 7.14352 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.032 3.968 2 N -0.508 5.508 3 C 0.025 3.975 4 C 0.144 3.856 5 C -0.107 4.107 6 C -0.044 4.044 7 O -0.528 6.528 8 Si 0.666 3.334 9 C -0.047 4.047 10 C -0.138 4.138 11 C 0.561 3.439 12 O -0.529 6.529 13 N -0.717 5.717 14 C 0.127 3.873 15 H 0.120 0.880 16 C -0.147 4.147 17 C -0.121 4.121 18 H 0.111 0.889 19 C 0.141 3.859 20 N -0.378 5.378 21 C 0.253 3.747 22 N -0.547 5.547 23 C 0.199 3.801 24 N -0.317 5.317 25 C -0.137 4.137 26 C -0.069 4.069 27 C -0.159 4.159 28 H 0.075 0.925 29 H 0.030 0.970 30 H 0.076 0.924 31 H 0.078 0.922 32 H 0.070 0.930 33 H 0.033 0.967 34 H 0.119 0.881 35 H 0.373 0.627 36 H -0.256 1.256 37 H -0.250 1.250 38 H 0.145 0.855 39 H 0.400 0.600 40 H 0.075 0.925 41 H 0.087 0.913 42 H 0.103 0.897 43 H 0.093 0.907 44 H 0.217 0.783 45 H 0.217 0.783 46 H 0.091 0.909 47 H 0.084 0.916 48 H 0.127 0.873 49 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.915 5.302 -1.732 6.815 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.115 4.115 2 N -0.229 5.229 3 C -0.121 4.121 4 C 0.049 3.951 5 C -0.108 4.108 6 C -0.155 4.155 7 O -0.333 6.333 8 Si 0.567 3.433 9 C -0.066 4.066 10 C -0.141 4.141 11 C 0.349 3.651 12 O -0.406 6.406 13 N -0.369 5.369 14 C 0.022 3.978 15 H 0.137 0.863 16 C -0.186 4.186 17 C -0.141 4.141 18 H 0.129 0.871 19 C 0.019 3.981 20 N -0.169 5.169 21 C -0.044 4.044 22 N -0.274 5.274 23 C -0.104 4.104 24 N -0.145 5.145 25 C -0.175 4.175 26 C -0.089 4.089 27 C -0.179 4.179 28 H 0.094 0.906 29 H 0.049 0.951 30 H 0.095 0.905 31 H 0.097 0.903 32 H 0.089 0.911 33 H 0.051 0.949 34 H 0.136 0.864 35 H 0.219 0.781 36 H -0.181 1.181 37 H -0.175 1.175 38 H 0.162 0.838 39 H 0.236 0.764 40 H 0.094 0.906 41 H 0.106 0.894 42 H 0.121 0.879 43 H 0.111 0.889 44 H 0.234 0.766 45 H 0.234 0.766 46 H 0.109 0.891 47 H 0.103 0.897 48 H 0.145 0.855 49 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -1.814 4.656 -0.566 5.029 hybrid contribution -0.996 1.685 -0.830 2.126 sum -2.810 6.341 -1.396 7.075 Atomic orbital electron populations 1.22445 0.84870 1.03252 1.00918 1.59397 1.09138 1.14018 1.40335 1.22507 1.00943 0.87166 1.01526 1.18835 0.94195 0.93262 0.88767 1.20320 0.98620 0.95617 0.96289 1.24824 0.97373 1.02475 0.90839 1.86570 1.48219 1.44500 1.53967 0.95048 0.77912 0.87189 0.83119 1.21061 0.96744 0.98156 0.90671 1.19849 1.02455 0.98149 0.93614 1.18201 0.80065 0.83940 0.82895 1.90822 1.37180 1.27331 1.85260 1.45878 1.52829 1.32831 1.05334 1.22468 0.98467 0.93359 0.83532 0.86264 1.23613 0.99141 1.01382 0.94453 1.22739 0.99072 0.99095 0.93149 0.87105 1.21860 1.00486 0.81883 0.93860 1.50552 1.05256 1.19420 1.41663 1.26093 0.91496 0.90965 0.95838 1.70567 1.19650 1.17078 1.20064 1.26064 0.87523 0.98144 0.98641 1.78037 1.15861 1.03896 1.16714 1.23368 1.03131 0.96680 0.94359 1.21132 0.95124 0.93540 0.99069 1.21656 1.02092 1.01180 0.92938 0.90604 0.95148 0.90542 0.90319 0.91148 0.94890 0.86393 0.78055 1.18086 1.17501 0.83775 0.76414 0.90574 0.89439 0.87932 0.88902 0.76644 0.76647 0.89063 0.89730 0.85473 0.85285 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 9.34 60.07 0.56 0.53 16 2 N -0.51 -0.04 4.20 -186.85 -0.78 -0.83 16 3 C 0.02 -0.03 9.32 60.06 0.56 0.53 16 4 C 0.14 0.02 4.69 -83.86 -0.39 -0.38 16 5 C -0.11 -0.05 5.27 -104.49 -0.55 -0.60 16 6 C -0.04 -0.03 2.33 36.00 0.08 0.06 16 7 O -0.53 -0.42 12.88 -35.23 -0.45 -0.87 16 8 Si 0.67 0.34 29.92 -169.99 -5.09 -4.75 16 9 C -0.05 -0.02 8.19 -39.22 -0.32 -0.35 16 10 C -0.14 0.01 5.88 -104.95 -0.62 -0.61 16 11 C 0.56 0.56 7.76 -12.48 -0.10 0.47 16 12 O -0.53 -2.50 15.95 5.28 0.08 -2.41 16 13 N -0.72 1.61 5.31 -54.06 -0.29 1.32 16 14 C 0.13 -0.27 4.21 -67.12 -0.28 -0.55 16 15 H 0.12 0.01 7.50 -51.93 -0.39 -0.38 16 16 C -0.15 0.38 7.45 -25.83 -0.19 0.19 16 17 C -0.12 0.38 3.88 -89.72 -0.35 0.04 16 18 H 0.11 -0.10 8.00 -51.93 -0.42 -0.52 16 19 C 0.14 -0.54 6.39 -4.04 -0.03 -0.56 16 20 N -0.38 0.11 3.69 -62.63 -0.23 -0.12 16 21 C 0.25 -0.10 12.63 -90.66 -1.14 -1.24 16 22 N -0.55 -1.45 11.19 -15.83 -0.18 -1.63 16 23 C 0.20 0.41 13.03 -91.81 -1.20 -0.79 16 24 N -0.32 -0.78 12.45 29.29 0.36 -0.41 16 25 C -0.14 0.61 7.39 -25.92 -0.19 0.42 16 26 C -0.07 0.15 9.53 -39.23 -0.37 -0.23 16 27 C -0.16 0.23 8.57 -39.44 -0.34 -0.11 16 28 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 29 H 0.03 -0.06 7.10 -51.93 -0.37 -0.43 16 30 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 31 H 0.08 -0.14 8.14 -51.92 -0.42 -0.56 16 32 H 0.07 -0.06 8.12 -51.93 -0.42 -0.48 16 33 H 0.03 -0.07 7.45 -51.93 -0.39 -0.45 16 34 H 0.12 0.20 7.78 -51.93 -0.40 -0.21 16 35 H 0.37 -1.08 8.70 45.56 0.40 -0.68 16 36 H -0.26 -0.83 7.11 56.52 0.40 -0.43 16 37 H -0.25 -0.85 7.11 56.52 0.40 -0.45 16 38 H 0.15 0.04 4.70 -52.49 -0.25 -0.21 16 39 H 0.40 -2.02 6.73 -40.82 -0.27 -2.30 16 40 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 41 H 0.09 -0.34 7.90 -51.93 -0.41 -0.75 16 42 H 0.10 -0.68 7.80 -51.93 -0.40 -1.09 16 43 H 0.09 -0.39 8.14 -51.93 -0.42 -0.81 16 44 H 0.22 -1.04 8.06 -52.48 -0.42 -1.46 16 45 H 0.22 -0.21 8.06 -52.49 -0.42 -0.63 16 46 H 0.09 -0.58 8.07 -51.93 -0.42 -1.00 16 47 H 0.08 -0.34 8.14 -51.93 -0.42 -0.76 16 48 H 0.13 -0.66 6.39 -52.48 -0.34 -0.99 16 49 H 0.13 -0.36 7.01 -52.49 -0.37 -0.73 16 LS Contribution 403.87 15.07 6.09 6.09 Total: 0.00 -11.18 403.87 -12.38 -23.57 By element: Atomic # 1 Polarization: -9.73 SS G_CDS: -7.03 Total: -16.75 kcal Atomic # 6 Polarization: 1.68 SS G_CDS: -4.87 Total: -3.19 kcal Atomic # 7 Polarization: -0.56 SS G_CDS: -1.12 Total: -1.67 kcal Atomic # 8 Polarization: -2.92 SS G_CDS: -0.37 Total: -3.29 kcal Atomic # 14 Polarization: 0.34 SS G_CDS: -5.09 Total: -4.75 kcal Total LS contribution 6.09 Total: 6.09 kcal Total: -11.18 -12.38 -23.57 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14644236_13422196.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 126.411 kcal (2) G-P(sol) polarization free energy of solvation -11.185 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 115.227 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.381 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.565 kcal (6) G-S(sol) free energy of system = (1) + (5) 102.846 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds