Wall clock time and date at job start Sun Mar 7 2021 00:08:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35987 * 117.00437 * 2 1 4 4 C 1.38561 * 120.06270 * 359.97438 * 3 2 1 5 5 C 1.38278 * 120.01542 * 180.02562 * 4 3 2 6 6 C 1.50703 * 119.92089 * 179.97438 * 5 4 3 7 7 O 1.42896 * 109.47055 * 300.00204 * 6 5 4 8 8 Si 1.86304 * 109.46911 * 180.02562 * 6 5 4 9 9 C 1.38212 * 120.15793 * 0.27311 * 5 4 3 10 10 C 1.38379 * 120.12996 * 359.45044 * 9 5 4 11 11 Cl 1.73601 * 120.01245 * 180.29264 * 10 9 5 12 12 C 1.38624 * 119.97817 * 0.54936 * 10 9 5 13 13 O 1.36022 * 120.07739 * 179.70213 * 12 10 9 14 14 C 1.42905 * 116.99970 * 270.02091 * 13 12 10 15 15 C 1.52995 * 109.46909 * 90.00254 * 14 13 12 16 16 C 1.50704 * 109.46920 * 209.99877 * 14 13 12 17 17 O 1.21281 * 119.99833 * 0.02562 * 16 14 13 18 18 N 1.34770 * 119.99943 * 180.02562 * 16 14 13 19 19 C 1.46505 * 120.00002 * 180.02562 * 18 16 14 20 20 H 1.08997 * 112.84795 * 23.80199 * 19 18 16 21 21 C 1.53787 * 113.61241 * 155.00199 * 19 18 16 22 22 C 1.53783 * 87.07649 * 139.97926 * 21 19 18 23 23 H 1.08995 * 113.61152 * 89.12025 * 22 21 19 24 24 C 1.53002 * 113.61079 * 219.92888 * 22 21 19 25 25 N 1.46499 * 109.46995 * 185.00185 * 24 22 21 26 26 C 1.34435 * 126.81936 * 125.00294 * 25 24 22 27 27 N 1.30832 * 108.07513 * 179.97438 * 26 25 24 28 28 C 1.33245 * 109.82867 * 359.97438 * 27 26 25 29 29 N 1.30709 * 108.94816 * 359.75792 * 28 27 26 30 30 C 1.53771 * 87.08502 * 334.56579 * 22 21 19 31 31 H 1.08998 * 109.46895 * 300.00473 * 1 2 3 32 32 H 1.09002 * 109.47154 * 59.99942 * 1 2 3 33 33 H 1.08996 * 109.47777 * 179.97438 * 1 2 3 34 34 H 1.07997 * 119.99351 * 0.04580 * 4 3 2 35 35 H 1.09002 * 109.47152 * 60.00012 * 6 5 4 36 36 H 0.96708 * 114.00101 * 299.99358 * 7 6 5 37 37 H 1.48497 * 110.00028 * 58.68223 * 8 6 5 38 38 H 1.48501 * 109.99652 * 179.97438 * 8 6 5 39 39 H 1.07994 * 119.93806 * 179.72647 * 9 5 4 40 40 H 1.08993 * 109.47011 * 329.99903 * 14 13 12 41 41 H 1.09004 * 109.47257 * 59.99636 * 15 14 13 42 42 H 1.09002 * 109.47017 * 179.97438 * 15 14 13 43 43 H 1.09003 * 109.47353 * 299.99682 * 15 14 13 44 44 H 0.97000 * 119.99958 * 0.02562 * 18 16 14 45 45 H 1.08996 * 113.60857 * 254.52504 * 21 19 18 46 46 H 1.08997 * 113.61306 * 25.34557 * 21 19 18 47 47 H 1.08994 * 109.47326 * 305.00513 * 24 22 21 48 48 H 1.09003 * 109.47058 * 65.00450 * 24 22 21 49 49 H 1.07992 * 125.96251 * 359.92804 * 26 25 24 50 50 H 1.07999 * 125.52781 * 179.97438 * 28 27 26 51 51 H 1.08998 * 113.61560 * 270.88507 * 30 22 21 52 52 H 1.09000 * 113.61944 * 139.98270 * 30 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0465 1.2116 0.0000 4 6 1.2932 2.3746 -0.0005 5 6 1.9221 3.6061 -0.0011 6 6 1.1007 4.8696 -0.0022 7 8 0.2768 4.9010 -1.1693 8 14 2.2349 6.3475 -0.0035 9 6 3.3021 3.6810 -0.0068 10 6 4.0606 2.5236 -0.0005 11 17 5.7939 2.6212 0.0000 12 6 3.4360 1.2861 0.0000 13 8 4.1796 0.1471 0.0001 14 6 4.5342 -0.3962 -1.2732 15 6 5.8686 0.1984 -1.7276 16 6 4.6634 -1.8936 -1.1620 17 8 4.4703 -2.4415 -0.0974 18 7 4.9935 -2.6238 -2.2456 19 6 5.1185 -4.0795 -2.1377 20 1 4.5474 -4.4928 -1.3064 21 6 4.8926 -4.8174 -3.4679 22 6 6.0537 -5.7406 -3.0622 23 1 5.7392 -6.6091 -2.4835 24 6 6.9816 -6.1045 -4.2231 25 7 7.9787 -7.0754 -3.7653 26 6 8.2359 -8.2804 -4.3030 27 7 9.1932 -8.8390 -3.6079 28 6 9.5713 -8.0246 -2.6234 29 7 8.8602 -6.9295 -2.6818 30 6 6.5717 -4.5791 -2.1979 31 1 -0.3633 0.5139 0.8899 32 1 -0.3633 0.5138 -0.8900 33 1 -0.3634 -1.0276 -0.0005 34 1 0.2146 2.3192 -0.0002 35 1 0.4715 4.8947 0.8875 36 1 0.7710 4.8812 -2.0004 37 1 3.1196 6.3078 -1.1955 38 1 1.4370 7.6000 -0.0053 39 1 3.7896 4.6446 -0.0116 40 1 3.7606 -0.1513 -2.0009 41 1 6.6422 -0.0465 -0.9997 42 1 6.1394 -0.2163 -2.6986 43 1 5.7752 1.2815 -1.8080 44 1 5.1483 -2.1855 -3.0970 45 1 3.9305 -5.3262 -3.5269 46 1 5.1040 -4.2081 -4.3466 47 1 6.3965 -6.5392 -5.0334 48 1 7.4860 -5.2067 -4.5802 49 1 7.7386 -8.7122 -5.1588 50 1 10.3428 -8.2339 -1.8972 51 1 7.2435 -3.9051 -2.7294 52 1 6.9651 -4.8952 -1.2317 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14644236_13428712.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:08:05 Heat of formation + Delta-G solvation = 16.347197 kcal Electronic energy + Delta-G solvation = -38377.372128 eV Core-core repulsion = 33181.155378 eV Total energy + Delta-G solvation = -5196.216751 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 423.144 amu Computer time = 1.82 seconds Orbital eigenvalues (eV) -42.96587 -42.02646 -41.29473 -39.98244 -39.29568 -38.89215 -37.80845 -37.00269 -35.53629 -34.33896 -32.89646 -32.14684 -31.48584 -31.34732 -29.01095 -28.59881 -26.84562 -26.73618 -25.77393 -24.19232 -23.70966 -22.86369 -22.84665 -22.33255 -21.62117 -20.74041 -19.70112 -18.89120 -18.60530 -18.39268 -18.20437 -17.58261 -17.41814 -16.97216 -16.75518 -16.45793 -16.36393 -16.25282 -16.06707 -15.93723 -15.85530 -15.70166 -15.51204 -15.02858 -14.92857 -14.64529 -14.46420 -14.27696 -14.17799 -13.88565 -13.68962 -13.58754 -13.45766 -13.32255 -13.14264 -12.88407 -12.82123 -12.75185 -12.66470 -12.40972 -12.21403 -12.00914 -11.93494 -11.89984 -11.65981 -11.41957 -11.37939 -10.97438 -10.79053 -10.75627 -10.72280 -10.54901 -10.12389 -9.85289 -9.45974 -4.92028 -0.36631 -0.05043 0.72126 0.82151 1.24216 1.42530 1.47238 1.58585 1.65259 1.93588 2.02459 2.13782 2.20356 2.66400 3.28788 3.30609 3.42663 3.44978 3.51800 3.55272 3.66967 3.70302 3.75006 3.77484 3.81277 3.92501 3.95587 3.98077 4.03133 4.13141 4.19885 4.24641 4.28197 4.33376 4.49256 4.56312 4.57916 4.63717 4.64650 4.66955 4.70556 4.72120 4.80007 4.81826 4.96743 5.04045 5.06079 5.09208 5.15450 5.21057 5.35123 5.46922 5.51336 5.88760 5.97301 6.29480 6.44501 6.46802 7.13233 7.15152 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 O -0.323 6.323 3 C 0.118 3.882 4 C -0.164 4.164 5 C -0.060 4.060 6 C -0.075 4.075 7 O -0.541 6.541 8 Si 0.751 3.249 9 C -0.132 4.132 10 C -0.017 4.017 11 Cl -0.038 7.038 12 C 0.053 3.947 13 O -0.311 6.311 14 C 0.077 3.923 15 C -0.175 4.175 16 C 0.516 3.484 17 O -0.568 6.568 18 N -0.698 5.698 19 C 0.114 3.886 20 H 0.085 0.915 21 C -0.110 4.110 22 C -0.111 4.111 23 H 0.082 0.918 24 C 0.135 3.865 25 N -0.379 5.379 26 C 0.256 3.744 27 N -0.586 5.586 28 C 0.183 3.817 29 N -0.345 5.345 30 C -0.136 4.136 31 H 0.069 0.931 32 H 0.074 0.926 33 H 0.112 0.888 34 H 0.159 0.841 35 H 0.137 0.863 36 H 0.389 0.611 37 H -0.275 1.275 38 H -0.296 1.296 39 H 0.161 0.839 40 H 0.105 0.895 41 H 0.058 0.942 42 H 0.103 0.897 43 H 0.083 0.917 44 H 0.419 0.581 45 H 0.090 0.910 46 H 0.123 0.877 47 H 0.146 0.854 48 H 0.101 0.899 49 H 0.260 0.740 50 H 0.228 0.772 51 H 0.096 0.904 52 H 0.041 0.959 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.129 3.368 -8.794 10.283 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 O -0.236 6.236 3 C 0.071 3.929 4 C -0.182 4.182 5 C -0.061 4.061 6 C -0.184 4.184 7 O -0.349 6.349 8 Si 0.655 3.345 9 C -0.150 4.150 10 C -0.045 4.045 11 Cl -0.008 7.008 12 C 0.008 3.992 13 O -0.227 6.227 14 C 0.018 3.982 15 C -0.233 4.233 16 C 0.302 3.698 17 O -0.446 6.446 18 N -0.352 5.352 19 C 0.009 3.991 20 H 0.103 0.897 21 C -0.149 4.149 22 C -0.131 4.131 23 H 0.101 0.899 24 C 0.015 3.985 25 N -0.169 5.169 26 C -0.040 4.040 27 N -0.314 5.314 28 C -0.120 4.120 29 N -0.173 5.173 30 C -0.174 4.174 31 H 0.087 0.913 32 H 0.092 0.908 33 H 0.131 0.869 34 H 0.176 0.824 35 H 0.155 0.845 36 H 0.238 0.762 37 H -0.201 1.201 38 H -0.223 1.223 39 H 0.178 0.822 40 H 0.123 0.877 41 H 0.077 0.923 42 H 0.121 0.879 43 H 0.102 0.898 44 H 0.257 0.743 45 H 0.109 0.891 46 H 0.142 0.858 47 H 0.163 0.837 48 H 0.120 0.880 49 H 0.276 0.724 50 H 0.244 0.756 51 H 0.114 0.886 52 H 0.060 0.940 Dipole moment (debyes) X Y Z Total from point charges -4.033 3.760 -7.459 9.276 hybrid contribution -0.291 -0.302 -1.021 1.104 sum -4.324 3.458 -8.480 10.128 Atomic orbital electron populations 1.23429 0.75938 1.05646 1.02828 1.86220 1.23669 1.25829 1.87910 1.19376 0.90875 0.85985 0.96665 1.21289 1.01600 0.90110 1.05234 1.20156 0.92781 0.95776 0.97411 1.25178 1.00570 1.00698 0.91977 1.86595 1.36177 1.95663 1.16463 0.94002 0.78461 0.73653 0.88384 1.20929 0.92947 0.97354 1.03787 1.20980 0.86194 0.93168 1.04124 1.98392 1.07934 1.98309 1.96203 1.17846 0.87075 0.85647 1.08663 1.86246 1.69894 1.38263 1.28283 1.22319 1.00003 0.90107 0.85790 1.22580 0.94455 1.03349 1.02890 1.20653 0.75704 0.89217 0.84193 1.90734 1.50406 1.73610 1.29862 1.45720 1.70266 1.07225 1.11991 1.22517 0.97272 0.79068 1.00243 0.89654 1.23300 0.98580 0.96489 0.96509 1.22485 0.96532 0.97242 0.96845 0.89931 1.22224 0.86986 0.92352 0.96962 1.50780 1.28366 1.15695 1.22108 1.26921 0.93978 0.83796 0.99281 1.70540 1.16915 1.34086 1.09875 1.26420 0.99948 0.87797 0.97834 1.78018 1.07456 1.24273 1.07551 1.23440 0.96404 0.97504 1.00094 0.91263 0.90778 0.86925 0.82387 0.84515 0.76157 1.20085 1.22349 0.82238 0.87687 0.92281 0.87858 0.89843 0.74278 0.89095 0.85837 0.83666 0.88042 0.72422 0.75575 0.88591 0.93998 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.04 9.81 113.37 1.11 1.07 16 2 O -0.32 -1.98 10.28 -79.54 -0.82 -2.80 16 3 C 0.12 0.53 6.70 22.57 0.15 0.69 16 4 C -0.16 0.07 8.60 22.36 0.19 0.27 16 5 C -0.06 0.14 5.39 -19.86 -0.11 0.03 16 6 C -0.07 0.33 2.82 71.24 0.20 0.53 16 7 O -0.54 1.24 12.76 -148.98 -1.90 -0.67 16 8 Si 0.75 -3.35 29.78 68.60 2.04 -1.31 16 9 C -0.13 0.18 8.45 22.30 0.19 0.37 16 10 C -0.02 -0.05 6.24 22.40 0.14 0.09 16 11 Cl -0.04 -0.10 24.90 -2.72 -0.07 -0.17 16 12 C 0.05 0.34 5.56 22.58 0.13 0.47 16 13 O -0.31 -3.25 8.55 -67.38 -0.58 -3.83 16 14 C 0.08 0.26 3.20 29.85 0.10 0.36 16 15 C -0.18 0.25 8.29 71.98 0.60 0.85 16 16 C 0.52 3.65 7.23 87.66 0.63 4.29 16 17 O -0.57 -10.58 16.10 16.01 0.26 -10.32 16 18 N -0.70 1.38 5.25 -440.02 -2.31 -0.93 16 19 C 0.11 -0.13 4.24 45.52 0.19 0.06 16 20 H 0.09 0.49 7.46 -2.39 -0.02 0.47 16 21 C -0.11 1.09 7.39 31.12 0.23 1.32 16 22 C -0.11 0.66 3.85 -10.27 -0.04 0.62 16 23 H 0.08 -0.15 8.14 -2.39 -0.02 -0.17 16 24 C 0.14 -1.23 6.39 86.38 0.55 -0.68 16 25 N -0.38 0.27 3.69 -352.06 -1.30 -1.02 16 26 C 0.26 -0.35 12.63 180.36 2.28 1.92 16 27 N -0.59 -3.65 11.19 -204.00 -2.28 -5.93 16 28 C 0.18 1.12 13.03 180.76 2.36 3.48 16 29 N -0.34 -2.24 12.58 -61.25 -0.77 -3.01 16 30 C -0.14 0.09 7.43 31.12 0.23 0.32 16 31 H 0.07 -0.31 7.66 -2.39 -0.02 -0.33 16 32 H 0.07 -0.44 7.66 -2.39 -0.02 -0.46 16 33 H 0.11 -0.50 8.14 -2.39 -0.02 -0.52 16 34 H 0.16 -0.57 6.30 -2.91 -0.02 -0.59 16 35 H 0.14 -0.89 7.96 -2.39 -0.02 -0.91 16 36 H 0.39 -3.06 8.70 -74.05 -0.64 -3.71 16 37 H -0.27 0.32 7.10 99.48 0.71 1.02 16 38 H -0.30 -0.92 7.11 99.48 0.71 -0.21 16 39 H 0.16 -0.83 4.86 -2.91 -0.01 -0.84 16 40 H 0.11 -0.08 7.91 -2.39 -0.02 -0.10 16 41 H 0.06 0.15 8.14 -2.39 -0.02 0.13 16 42 H 0.10 -0.86 7.56 -2.39 -0.02 -0.87 16 43 H 0.08 -0.13 5.45 -2.39 -0.01 -0.15 16 44 H 0.42 -4.15 8.14 -92.71 -0.75 -4.91 16 45 H 0.09 -0.94 8.14 -2.39 -0.02 -0.96 16 46 H 0.12 -1.93 8.08 -2.39 -0.02 -1.95 16 47 H 0.15 -2.46 8.09 -2.39 -0.02 -2.48 16 48 H 0.10 -1.07 7.85 -2.39 -0.02 -1.09 16 49 H 0.26 -3.12 8.06 -2.91 -0.02 -3.14 16 50 H 0.23 0.22 8.06 -2.91 -0.02 0.19 16 51 H 0.10 -0.25 7.90 -2.39 -0.02 -0.27 16 52 H 0.04 0.29 8.14 -2.39 -0.02 0.27 16 Total: 0.00 -36.54 444.95 1.04 -35.49 By element: Atomic # 1 Polarization: -21.19 SS G_CDS: -0.36 Total: -21.55 kcal Atomic # 6 Polarization: 6.92 SS G_CDS: 9.13 Total: 16.05 kcal Atomic # 7 Polarization: -4.24 SS G_CDS: -6.66 Total: -10.90 kcal Atomic # 8 Polarization: -14.57 SS G_CDS: -3.04 Total: -17.61 kcal Atomic # 14 Polarization: -3.35 SS G_CDS: 2.04 Total: -1.31 kcal Atomic # 17 Polarization: -0.10 SS G_CDS: -0.07 Total: -0.17 kcal Total: -36.54 1.04 -35.49 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14644236_13428712.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 51.839 kcal (2) G-P(sol) polarization free energy of solvation -36.537 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 15.302 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.045 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.492 kcal (6) G-S(sol) free energy of system = (1) + (5) 16.347 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.83 seconds