Wall clock time and date at job start Sun Mar 7 2021 00:08:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86295 * 109.46598 * 2 1 4 4 C 1.50699 * 109.47197 * 240.00039 * 2 1 3 5 5 C 1.34177 * 125.43813 * 300.00494 * 4 2 1 6 6 C 1.47019 * 105.95224 * 179.97438 * 5 4 2 7 7 C 1.47380 * 127.19149 * 179.97438 * 6 5 4 8 8 O 1.21614 * 120.00298 * 0.02562 * 7 6 5 9 9 N 1.34781 * 120.00178 * 179.97438 * 7 6 5 10 10 C 1.46494 * 120.00001 * 180.02562 * 9 7 6 11 11 H 1.09000 * 112.91124 * 23.74936 * 10 9 7 12 12 C 1.53780 * 113.61538 * 155.00316 * 10 9 7 13 13 C 1.53780 * 87.08488 * 139.97654 * 12 10 9 14 14 H 1.09003 * 113.61137 * 89.20025 * 13 12 10 15 15 C 1.52997 * 113.61900 * 220.01941 * 13 12 10 16 16 N 1.46505 * 109.47212 * 184.99939 * 15 13 12 17 17 C 1.34431 * 126.82034 * 124.70925 * 16 15 13 18 18 N 1.30831 * 108.07452 * 179.89522 * 17 16 15 19 19 C 1.33242 * 109.83134 * 0.38128 * 18 17 16 20 20 N 1.30720 * 108.94259 * 359.76538 * 19 18 17 21 21 C 1.53787 * 87.08169 * 334.56869 * 13 12 10 22 22 C 1.36419 * 105.61919 * 0.21859 * 6 5 4 23 23 O 1.33654 * 108.38918 * 359.63513 * 22 6 5 24 24 H 0.96705 * 114.00133 * 299.99552 * 1 2 3 25 25 H 1.09000 * 109.47246 * 120.00110 * 2 1 3 26 26 H 1.48503 * 109.99713 * 178.68212 * 3 2 1 27 27 H 1.48493 * 110.00376 * 299.99963 * 3 2 1 28 28 H 1.07999 * 127.02205 * 0.02562 * 5 4 2 29 29 H 0.97000 * 119.99784 * 0.02562 * 9 7 6 30 30 H 1.09004 * 113.61321 * 25.42937 * 12 10 9 31 31 H 1.09001 * 113.69385 * 254.53995 * 12 10 9 32 32 H 1.09002 * 109.47153 * 64.99931 * 15 13 12 33 33 H 1.09001 * 109.46832 * 305.00122 * 15 13 12 34 34 H 1.08004 * 125.96211 * 0.03907 * 17 16 15 35 35 H 1.07997 * 125.52973 * 179.80122 * 19 18 17 36 36 H 1.08998 * 113.61477 * 139.97815 * 21 13 12 37 37 H 1.08992 * 113.61461 * 270.88344 * 21 13 12 38 38 H 1.07998 * 125.80283 * 179.75712 * 22 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 1.6753 -1.9881 -1.5502 6 6 2.3680 -2.2326 -2.8237 7 6 2.3970 -3.4879 -3.5954 8 8 1.8015 -4.4665 -3.1873 9 7 3.0828 -3.5510 -4.7539 10 6 3.1112 -4.7986 -5.5212 11 1 2.2594 -5.4455 -5.3111 12 6 3.3727 -4.5927 -7.0226 13 6 4.2687 -5.8408 -6.9576 14 1 3.7335 -6.7724 -7.1416 15 6 5.5506 -5.7188 -7.7839 16 7 6.2735 -6.9928 -7.7547 17 6 6.6695 -7.7188 -8.8145 18 7 7.2834 -8.7850 -8.3695 19 6 7.2918 -8.7788 -7.0371 20 7 6.6849 -7.7011 -6.6140 21 6 4.4653 -5.5255 -5.4653 22 6 2.9829 -1.0564 -3.1390 23 8 2.7057 -0.1658 -2.1818 24 1 -0.3934 0.4417 0.7651 25 1 1.7924 -0.5138 0.8900 26 1 3.5345 1.7704 0.0321 27 1 1.5613 2.4679 -1.2084 28 1 1.0810 -2.6927 -0.9874 29 1 3.5576 -2.7704 -5.0797 30 1 3.9169 -3.6758 -7.2492 31 1 2.4864 -4.7232 -7.6435 32 1 6.1801 -4.9341 -7.3642 33 1 5.2964 -5.4687 -8.8139 34 1 6.5109 -7.4650 -9.8522 35 1 7.7295 -9.5403 -6.4087 36 1 4.4602 -6.4097 -4.8279 37 1 5.3081 -4.8638 -5.2662 38 1 3.5888 -0.8751 -4.0145 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14644236_13456056.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:08:14 Heat of formation + Delta-G solvation = 79.375297 kcal Electronic energy + Delta-G solvation = -23650.049781 eV Core-core repulsion = 19885.424735 eV Total energy + Delta-G solvation = -3764.625046 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 305.121 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -43.77133 -42.98845 -41.16079 -39.41653 -37.99954 -35.52738 -34.35580 -33.67064 -32.12530 -31.91798 -29.20123 -26.92269 -26.77617 -25.61638 -23.83851 -22.89260 -22.33766 -22.18268 -21.34058 -20.51781 -19.00985 -18.72810 -18.40601 -17.48243 -17.31883 -17.16361 -16.82264 -16.20667 -16.07206 -15.88874 -15.74206 -15.69848 -15.11221 -14.84702 -14.62311 -14.22062 -14.14189 -13.84923 -13.75534 -13.65495 -13.24311 -12.97482 -12.73745 -12.36902 -12.12405 -12.07676 -11.56063 -11.05059 -10.92301 -10.90728 -10.72909 -10.63156 -10.59702 -10.13726 -9.81045 -5.15794 0.17243 0.68296 0.84564 1.08565 1.30252 1.49159 1.61962 1.94207 2.00980 2.06427 2.30231 3.07571 3.16889 3.24723 3.39618 3.42841 3.48427 3.54955 3.59733 3.81035 3.81594 3.93478 3.98029 4.06376 4.15171 4.32571 4.38223 4.45661 4.53689 4.56028 4.61061 4.72953 4.79109 4.99062 5.05921 5.19714 5.30285 5.42400 5.49576 5.79931 5.81517 6.37795 6.41627 7.15150 7.16159 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.036 4.036 3 Si 0.713 3.287 4 C -0.016 4.016 5 C -0.117 4.117 6 C -0.235 4.235 7 C 0.590 3.410 8 O -0.528 6.528 9 N -0.718 5.718 10 C 0.124 3.876 11 H 0.119 0.881 12 C -0.137 4.137 13 C -0.119 4.119 14 H 0.101 0.899 15 C 0.141 3.859 16 N -0.380 5.380 17 C 0.252 3.748 18 N -0.547 5.547 19 C 0.197 3.803 20 N -0.312 5.312 21 C -0.135 4.135 22 C 0.030 3.970 23 O -0.173 6.173 24 H 0.392 0.608 25 H 0.096 0.904 26 H -0.252 1.252 27 H -0.250 1.250 28 H 0.164 0.836 29 H 0.398 0.602 30 H 0.091 0.909 31 H 0.083 0.917 32 H 0.091 0.909 33 H 0.105 0.895 34 H 0.218 0.782 35 H 0.217 0.783 36 H 0.078 0.922 37 H 0.087 0.913 38 H 0.214 0.786 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.373 6.518 -0.601 6.556 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.350 6.350 2 C -0.146 4.146 3 Si 0.612 3.388 4 C -0.064 4.064 5 C -0.136 4.136 6 C -0.240 4.240 7 C 0.378 3.622 8 O -0.405 6.405 9 N -0.369 5.369 10 C 0.019 3.981 11 H 0.137 0.863 12 C -0.176 4.176 13 C -0.139 4.139 14 H 0.119 0.881 15 C 0.019 3.981 16 N -0.171 5.171 17 C -0.045 4.045 18 N -0.274 5.274 19 C -0.106 4.106 20 N -0.140 5.140 21 C -0.174 4.174 22 C -0.041 4.041 23 O -0.070 6.070 24 H 0.241 0.759 25 H 0.113 0.887 26 H -0.177 1.177 27 H -0.174 1.174 28 H 0.182 0.818 29 H 0.232 0.768 30 H 0.110 0.890 31 H 0.102 0.898 32 H 0.109 0.891 33 H 0.123 0.877 34 H 0.234 0.766 35 H 0.233 0.767 36 H 0.097 0.903 37 H 0.105 0.895 38 H 0.230 0.770 Dipole moment (debyes) X Y Z Total from point charges 0.604 6.383 -0.699 6.450 hybrid contribution 0.225 -0.305 -0.709 0.804 sum 0.829 6.078 -1.408 6.294 Atomic orbital electron populations 1.86464 1.16267 1.82062 1.50250 1.23802 0.86239 1.11776 0.92767 0.95100 0.80820 0.76008 0.86895 1.21169 0.99573 0.92891 0.92758 1.22506 1.00595 0.95491 0.95047 1.21535 1.07516 0.95140 0.99784 1.17269 0.78234 0.86507 0.80204 1.90822 1.43935 1.36842 1.68865 1.45784 1.53349 1.14715 1.23067 1.22528 0.99416 0.86099 0.90046 0.86326 1.23386 1.00168 0.97856 0.96158 1.22629 0.95122 0.99587 0.96554 0.88058 1.21864 0.92158 0.81583 1.02543 1.50587 1.42879 1.19179 1.04431 1.26134 0.94215 0.88252 0.95901 1.70565 1.23575 1.22181 1.11038 1.26083 0.97578 0.96213 0.90739 1.78096 1.19792 1.08408 1.07669 1.23468 0.97341 1.01149 0.95422 1.24450 0.99894 0.87178 0.92546 1.83693 1.55077 1.40139 1.28096 0.75923 0.88665 1.17686 1.17416 0.81800 0.76761 0.89026 0.89818 0.89102 0.87673 0.76552 0.76708 0.90289 0.89497 0.76984 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.24 12.84 -35.23 -0.45 -0.22 16 2 C -0.04 0.02 2.97 36.01 0.11 0.13 16 3 Si 0.71 -1.16 32.08 -169.99 -5.45 -6.61 16 4 C -0.02 -0.04 6.24 -35.74 -0.22 -0.26 16 5 C -0.12 -0.40 10.88 -37.46 -0.41 -0.81 16 6 C -0.24 -0.56 6.31 -103.28 -0.65 -1.22 16 7 C 0.59 1.90 7.81 -12.54 -0.10 1.80 16 8 O -0.53 -3.95 16.58 5.26 0.09 -3.86 16 9 N -0.72 0.55 5.35 -54.10 -0.29 0.26 16 10 C 0.12 -0.11 4.24 -67.12 -0.28 -0.40 16 11 H 0.12 0.16 7.46 -51.93 -0.39 -0.23 16 12 C -0.14 0.54 7.39 -25.92 -0.19 0.35 16 13 C -0.12 0.32 3.85 -89.81 -0.35 -0.03 16 14 H 0.10 -0.13 8.14 -51.93 -0.42 -0.56 16 15 C 0.14 -0.49 6.39 -4.04 -0.03 -0.51 16 16 N -0.38 -0.01 3.69 -62.63 -0.23 -0.24 16 17 C 0.25 -0.03 12.63 -90.65 -1.14 -1.17 16 18 N -0.55 -1.61 11.19 -15.83 -0.18 -1.79 16 19 C 0.20 0.47 13.03 -91.81 -1.20 -0.73 16 20 N -0.31 -0.85 12.57 29.29 0.37 -0.48 16 21 C -0.14 0.12 7.43 -25.91 -0.19 -0.08 16 22 C 0.03 -0.01 11.61 30.08 0.35 0.34 16 23 O -0.17 -0.37 8.89 7.66 0.07 -0.30 16 24 H 0.39 -2.34 8.74 45.56 0.40 -1.94 16 25 H 0.10 -0.27 7.96 -51.93 -0.41 -0.68 16 26 H -0.25 -0.29 7.11 56.52 0.40 0.11 16 27 H -0.25 -0.53 7.11 56.52 0.40 -0.12 16 28 H 0.16 0.56 8.06 -52.49 -0.42 0.14 16 29 H 0.40 -1.63 7.70 -40.82 -0.31 -1.95 16 30 H 0.09 -0.52 8.08 -51.93 -0.42 -0.94 16 31 H 0.08 -0.33 8.14 -51.93 -0.42 -0.76 16 32 H 0.09 -0.35 7.84 -51.93 -0.41 -0.76 16 33 H 0.11 -0.66 8.09 -51.93 -0.42 -1.08 16 34 H 0.22 -1.00 8.06 -52.48 -0.42 -1.42 16 35 H 0.22 -0.12 8.06 -52.49 -0.42 -0.54 16 36 H 0.08 0.13 8.14 -51.93 -0.42 -0.29 16 37 H 0.09 -0.10 7.90 -51.93 -0.41 -0.51 16 38 H 0.21 -1.11 7.47 -52.49 -0.39 -1.50 16 LS Contribution 338.02 15.07 5.09 5.09 Total: 0.00 -13.97 338.02 -9.79 -23.76 By element: Atomic # 1 Polarization: -8.54 SS G_CDS: -4.50 Total: -13.04 kcal Atomic # 6 Polarization: 1.73 SS G_CDS: -4.31 Total: -2.57 kcal Atomic # 7 Polarization: -1.92 SS G_CDS: -0.33 Total: -2.25 kcal Atomic # 8 Polarization: -4.09 SS G_CDS: -0.30 Total: -4.38 kcal Atomic # 14 Polarization: -1.16 SS G_CDS: -5.45 Total: -6.61 kcal Total LS contribution 5.09 Total: 5.09 kcal Total: -13.97 -9.79 -23.76 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14644236_13456056.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 103.140 kcal (2) G-P(sol) polarization free energy of solvation -13.972 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 89.167 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.792 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.765 kcal (6) G-S(sol) free energy of system = (1) + (5) 79.375 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds