Wall clock time and date at job start Sun Mar 7 2021 00:08:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.37868 * 126.45606 * 2 1 4 4 C 1.46675 * 126.23253 * 359.96115 * 3 2 1 5 5 O 1.21699 * 120.00256 * 359.97438 * 4 3 2 6 6 N 1.34782 * 120.00184 * 180.02562 * 4 3 2 7 7 C 1.46500 * 120.00113 * 179.97438 * 6 4 3 8 8 H 1.08997 * 112.84973 * 336.19485 * 7 6 4 9 9 C 1.53953 * 113.74306 * 107.40576 * 7 6 4 10 10 C 1.53777 * 87.01949 * 139.94162 * 9 7 6 11 11 H 1.09003 * 113.61429 * 89.23222 * 10 9 7 12 12 C 1.53001 * 113.61095 * 220.04323 * 10 9 7 13 13 N 1.46499 * 109.47683 * 274.13730 * 12 10 9 14 14 C 1.34430 * 126.82358 * 124.97840 * 13 12 10 15 15 N 1.30832 * 108.07308 * 179.79414 * 14 13 12 16 16 C 1.33234 * 109.83313 * 0.40801 * 15 14 13 17 17 N 1.30720 * 108.94479 * 359.58957 * 16 15 14 18 18 C 1.53779 * 87.17529 * 334.63422 * 10 9 7 19 19 N 1.37650 * 107.53672 * 180.22389 * 3 2 1 20 20 C 1.35542 * 108.63994 * 359.56720 * 19 3 2 21 21 C 1.50692 * 125.56468 * 180.13506 * 20 19 3 22 22 O 1.42897 * 109.47227 * 65.32317 * 21 20 19 23 23 Si 1.86295 * 109.47295 * 185.32777 * 21 20 19 24 24 C 1.35450 * 108.87062 * 0.43887 * 20 19 3 25 25 H 1.08997 * 109.46906 * 90.00315 * 1 2 3 26 26 H 1.09006 * 109.46987 * 210.00236 * 1 2 3 27 27 H 1.08996 * 109.47249 * 330.00410 * 1 2 3 28 28 H 0.96997 * 119.99778 * 359.97438 * 6 4 3 29 29 H 1.08995 * 113.61347 * 25.41797 * 9 7 6 30 30 H 1.09002 * 113.66497 * 254.47205 * 9 7 6 31 31 H 1.09009 * 109.47058 * 154.13817 * 12 10 9 32 32 H 1.09002 * 109.47378 * 34.14269 * 12 10 9 33 33 H 1.07997 * 125.95719 * 0.08180 * 14 13 12 34 34 H 1.08002 * 125.53021 * 179.85853 * 16 15 14 35 35 H 1.08999 * 113.61258 * 139.93868 * 18 10 9 36 36 H 1.08992 * 113.62134 * 270.75992 * 18 10 9 37 37 H 0.96993 * 125.68498 * 179.69490 * 19 3 2 38 38 H 1.09004 * 109.47277 * 305.32490 * 21 20 19 39 39 H 0.96701 * 114.00068 * 60.00399 * 22 21 20 40 40 H 1.48504 * 110.00301 * 58.67880 * 23 21 20 41 41 H 1.48498 * 110.00389 * 180.02562 * 23 21 20 42 42 H 1.07998 * 126.06977 * 179.77295 * 24 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.3263 1.1089 0.0000 4 6 1.8898 2.5092 -0.0008 5 8 0.7026 2.7766 -0.0020 6 7 2.8036 3.4999 -0.0012 7 6 2.3677 4.8986 -0.0026 8 1 1.3646 5.0288 -0.4086 9 6 2.5851 5.6169 1.3416 10 6 3.0191 6.8447 0.5237 11 1 2.1950 7.5080 0.2612 12 6 4.2134 7.5896 1.1235 13 7 3.7381 8.5523 2.1202 14 6 4.1270 8.6414 3.4039 15 7 3.4741 9.6305 3.9582 16 6 2.6565 10.1884 3.0664 17 7 2.7847 9.5649 1.9247 18 6 3.4039 5.8662 -0.5985 19 7 3.6284 0.6626 -0.0051 20 6 3.6218 -0.6928 0.0014 21 6 4.8434 -1.5752 0.0018 22 8 5.5628 -1.3923 1.2228 23 14 4.3223 -3.3572 -0.1510 24 6 2.3380 -1.1247 0.0009 25 1 -0.3633 -0.0001 -1.0276 26 1 -0.3633 -0.8900 0.5139 27 1 -0.3633 0.8900 0.5137 28 1 3.7499 3.2869 -0.0006 29 1 3.3865 5.1866 1.9420 30 1 1.6670 5.7721 1.9083 31 1 4.7462 8.1182 0.3330 32 1 4.8852 6.8754 1.5997 33 1 4.8551 8.0099 3.8912 34 1 1.9981 11.0235 3.2548 35 1 3.1459 6.2223 -1.5958 36 1 4.4301 5.5052 -0.5303 37 1 4.4190 1.2244 -0.0105 38 1 5.4832 -1.3104 -0.8401 39 1 5.0537 -1.6096 2.0156 40 1 3.5457 -3.5540 -1.4014 41 1 5.5179 -4.2379 -0.1513 42 1 2.0137 -2.1548 0.0018 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14644236_13940406.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:08:17 Heat of formation + Delta-G solvation = 95.638779 kcal Electronic energy + Delta-G solvation = -25788.371065 eV Core-core repulsion = 21966.632299 eV Total energy + Delta-G solvation = -3821.738766 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 318.148 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -43.01060 -42.64178 -41.06685 -39.38378 -37.84204 -35.63295 -34.29350 -33.38952 -32.14155 -31.68617 -29.28066 -28.19202 -27.05995 -26.97971 -24.63245 -22.98519 -22.90801 -22.09037 -21.56721 -21.17795 -20.23968 -19.50636 -18.50891 -18.14548 -17.48902 -16.82965 -16.73796 -16.57428 -16.21150 -16.01710 -15.80383 -15.42332 -15.18342 -15.12385 -14.83403 -14.46157 -14.38196 -14.04828 -13.85920 -13.75372 -13.61132 -13.50314 -13.35194 -12.94797 -12.82977 -12.49824 -12.22035 -12.09113 -12.06321 -11.74385 -11.04882 -10.93230 -10.78169 -10.73482 -10.60166 -10.24973 -9.86592 -9.21311 -5.10283 0.30863 0.66699 1.06721 1.27972 1.48046 1.59491 1.79678 1.94720 2.05085 2.10194 2.29282 3.12393 3.19616 3.23020 3.25654 3.38832 3.46149 3.51500 3.69040 3.73508 3.89396 3.97968 4.10765 4.12113 4.16433 4.28392 4.30771 4.34277 4.49287 4.59825 4.70376 4.70691 4.79094 4.81073 4.98333 5.01549 5.18211 5.27117 5.29613 5.41629 5.47845 5.60734 5.80155 5.86047 6.17732 6.31632 6.36622 7.07634 7.13470 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.094 4.094 2 C -0.062 4.062 3 C -0.058 4.058 4 C 0.592 3.408 5 O -0.520 6.520 6 N -0.724 5.724 7 C 0.128 3.872 8 H 0.121 0.879 9 C -0.147 4.147 10 C -0.120 4.120 11 H 0.111 0.889 12 C 0.141 3.859 13 N -0.378 5.378 14 C 0.253 3.747 15 N -0.546 5.546 16 C 0.199 3.801 17 N -0.317 5.317 18 C -0.137 4.137 19 N -0.525 5.525 20 C 0.026 3.974 21 C -0.055 4.055 22 O -0.543 6.543 23 Si 0.720 3.280 24 C -0.200 4.200 25 H 0.069 0.931 26 H 0.066 0.934 27 H 0.081 0.919 28 H 0.394 0.606 29 H 0.086 0.914 30 H 0.076 0.924 31 H 0.093 0.907 32 H 0.102 0.898 33 H 0.217 0.783 34 H 0.217 0.783 35 H 0.084 0.916 36 H 0.090 0.910 37 H 0.415 0.585 38 H 0.114 0.886 39 H 0.384 0.616 40 H -0.253 1.253 41 H -0.253 1.253 42 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.041 -3.399 0.166 5.283 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.071 4.071 3 C -0.171 4.171 4 C 0.380 3.620 5 O -0.395 6.395 6 N -0.374 5.374 7 C 0.024 3.976 8 H 0.139 0.861 9 C -0.186 4.186 10 C -0.140 4.140 11 H 0.129 0.871 12 C 0.019 3.981 13 N -0.169 5.169 14 C -0.044 4.044 15 N -0.273 5.273 16 C -0.104 4.104 17 N -0.145 5.145 18 C -0.176 4.176 19 N -0.121 5.121 20 C -0.092 4.092 21 C -0.165 4.165 22 O -0.349 6.349 23 Si 0.620 3.380 24 C -0.224 4.224 25 H 0.088 0.912 26 H 0.085 0.915 27 H 0.100 0.900 28 H 0.228 0.772 29 H 0.104 0.896 30 H 0.094 0.906 31 H 0.111 0.889 32 H 0.120 0.880 33 H 0.233 0.767 34 H 0.234 0.766 35 H 0.103 0.897 36 H 0.108 0.892 37 H 0.253 0.747 38 H 0.132 0.868 39 H 0.232 0.768 40 H -0.177 1.177 41 H -0.178 1.178 42 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges 3.464 -3.370 -1.106 4.958 hybrid contribution 1.383 0.676 -0.245 1.559 sum 4.847 -2.694 -1.350 5.708 Atomic orbital electron populations 1.20404 0.88805 1.03323 1.02574 1.19957 0.96078 0.90349 1.00696 1.20221 0.83562 0.93500 1.19807 1.17074 0.85916 0.83018 0.76003 1.90849 1.15907 1.83128 1.49613 1.45859 1.09103 1.06078 1.76389 1.22494 1.00031 0.78400 0.96721 0.86108 1.23605 1.02672 0.95142 0.97170 1.22698 0.98621 0.95606 0.97050 0.87065 1.21853 0.96183 0.89330 0.90717 1.50548 1.31023 1.25236 1.10089 1.26093 0.98717 0.96682 0.82897 1.70563 1.12275 1.10871 1.33619 1.26068 0.98022 1.00053 0.86214 1.78042 1.09783 1.02801 1.23877 1.23372 0.99614 0.95455 0.99149 1.41844 1.07076 1.06584 1.56626 1.21107 0.96878 0.83288 1.07893 1.24946 0.92082 1.09234 0.90254 1.86497 1.42027 1.91139 1.15214 0.93989 0.82795 0.73350 0.87911 1.20613 0.90785 0.99092 1.11945 0.91238 0.91478 0.90014 0.77230 0.89556 0.90553 0.88897 0.87984 0.76652 0.76625 0.89714 0.89175 0.74726 0.86834 0.76821 1.17674 1.17776 0.83139 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.13 9.83 36.01 0.35 0.22 16 2 C -0.06 -0.10 6.21 -104.16 -0.65 -0.75 16 3 C -0.06 -0.06 7.06 -81.98 -0.58 -0.64 16 4 C 0.59 1.09 7.79 -12.85 -0.10 0.99 16 5 O -0.52 -2.77 14.40 5.19 0.07 -2.69 16 6 N -0.72 1.21 5.36 -54.23 -0.29 0.92 16 7 C 0.13 -0.22 4.24 -67.02 -0.28 -0.50 16 8 H 0.12 0.06 7.46 -51.93 -0.39 -0.33 16 9 C -0.15 0.31 7.45 -25.83 -0.19 0.12 16 10 C -0.12 0.34 3.86 -89.81 -0.35 -0.01 16 11 H 0.11 -0.07 8.03 -51.93 -0.42 -0.49 16 12 C 0.14 -0.49 6.37 -4.04 -0.03 -0.51 16 13 N -0.38 0.00 3.69 -62.63 -0.23 -0.23 16 14 C 0.25 -0.03 12.63 -90.65 -1.14 -1.17 16 15 N -0.55 -1.57 11.19 -15.83 -0.18 -1.75 16 16 C 0.20 0.45 13.03 -91.81 -1.20 -0.75 16 17 N -0.32 -0.85 12.47 29.29 0.37 -0.49 16 18 C -0.14 0.55 7.40 -25.92 -0.19 0.36 16 19 N -0.52 0.72 5.99 -5.70 -0.03 0.69 16 20 C 0.03 -0.03 6.46 -81.95 -0.53 -0.56 16 21 C -0.05 0.12 3.08 36.00 0.11 0.23 16 22 O -0.54 1.05 12.88 -35.23 -0.45 0.60 16 23 Si 0.72 -1.84 30.56 -169.99 -5.19 -7.03 16 24 C -0.20 0.04 9.27 -39.98 -0.37 -0.33 16 25 H 0.07 0.10 8.14 -51.93 -0.42 -0.33 16 26 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 27 H 0.08 0.25 6.49 -51.93 -0.34 -0.09 16 28 H 0.39 -1.75 7.86 -40.82 -0.32 -2.07 16 29 H 0.09 -0.28 7.92 -51.93 -0.41 -0.69 16 30 H 0.08 0.01 8.14 -51.93 -0.42 -0.42 16 31 H 0.09 -0.35 8.14 -51.92 -0.42 -0.78 16 32 H 0.10 -0.64 7.82 -51.93 -0.41 -1.04 16 33 H 0.22 -0.97 8.06 -52.49 -0.42 -1.40 16 34 H 0.22 -0.17 8.06 -52.49 -0.42 -0.59 16 35 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 36 H 0.09 -0.53 8.08 -51.93 -0.42 -0.94 16 37 H 0.42 -1.62 8.19 -40.82 -0.33 -1.95 16 38 H 0.11 -0.24 7.96 -51.93 -0.41 -0.66 16 39 H 0.38 -2.04 8.70 45.56 0.40 -1.64 16 40 H -0.25 -0.03 7.11 56.52 0.40 0.37 16 41 H -0.25 -0.13 7.11 56.52 0.40 0.27 16 42 H 0.15 -0.33 6.19 -52.49 -0.32 -0.66 16 LS Contribution 356.94 15.07 5.38 5.38 Total: 0.00 -11.28 356.94 -11.24 -22.52 By element: Atomic # 1 Polarization: -9.07 SS G_CDS: -5.53 Total: -14.60 kcal Atomic # 6 Polarization: 1.84 SS G_CDS: -5.14 Total: -3.30 kcal Atomic # 7 Polarization: -0.49 SS G_CDS: -0.37 Total: -0.86 kcal Atomic # 8 Polarization: -1.72 SS G_CDS: -0.38 Total: -2.10 kcal Atomic # 14 Polarization: -1.84 SS G_CDS: -5.19 Total: -7.03 kcal Total LS contribution 5.38 Total: 5.38 kcal Total: -11.28 -11.24 -22.52 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14644236_13940406.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 118.156 kcal (2) G-P(sol) polarization free energy of solvation -11.281 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 106.876 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.237 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.517 kcal (6) G-S(sol) free energy of system = (1) + (5) 95.639 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds