Wall clock time and date at job start Sun Mar 7 2021 00:08:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86298 * 109.47386 * 2 1 4 4 C 1.50703 * 109.47277 * 120.00139 * 2 1 3 5 5 C 1.31113 * 118.54735 * 250.00164 * 4 2 1 6 6 N 1.38927 * 121.84612 * 179.87586 * 5 4 2 7 7 C 1.46923 * 118.95658 * 12.82496 * 6 5 4 8 8 C 1.50702 * 109.90017 * 197.08436 * 7 6 5 9 9 O 1.21281 * 119.99703 * 18.41221 * 8 7 6 10 10 N 1.34774 * 119.99848 * 198.40586 * 8 7 6 11 11 C 1.46509 * 119.99802 * 180.02562 * 10 8 7 12 12 H 1.08996 * 112.84767 * 25.33635 * 11 10 8 13 13 C 1.53774 * 113.61485 * 156.53095 * 11 10 8 14 14 C 1.53779 * 87.08491 * 139.97817 * 13 11 10 15 15 H 1.09001 * 113.61044 * 89.19463 * 14 13 11 16 16 C 1.52988 * 113.61853 * 220.02009 * 14 13 11 17 17 N 1.46501 * 109.47452 * 185.00159 * 16 14 13 18 18 C 1.34428 * 126.82842 * 124.70798 * 17 16 14 19 19 N 1.30833 * 108.07836 * 179.89740 * 18 17 16 20 20 C 1.33241 * 109.82947 * 0.37933 * 19 18 17 21 21 N 1.30717 * 108.94609 * 359.76403 * 20 19 18 22 22 C 1.53782 * 113.61128 * 254.13863 * 11 10 8 23 23 C 1.53540 * 107.78369 * 316.74544 * 7 6 5 24 24 C 1.50203 * 118.54365 * 70.01837 * 4 2 1 25 25 H 0.96696 * 113.99431 * 299.99607 * 1 2 3 26 26 H 1.09003 * 109.47172 * 239.99901 * 2 1 3 27 27 H 1.48499 * 109.99810 * 300.00378 * 3 2 1 28 28 H 1.48506 * 109.99875 * 61.32046 * 3 2 1 29 29 H 1.08002 * 119.07306 * 359.58737 * 5 4 2 30 30 H 0.97002 * 120.55587 * 193.05468 * 6 5 4 31 31 H 1.09006 * 109.61573 * 76.24352 * 7 6 5 32 32 H 0.97001 * 120.00548 * 0.02562 * 10 8 7 33 33 H 1.09002 * 113.61902 * 254.53051 * 13 11 10 34 34 H 1.09013 * 113.61359 * 25.34704 * 13 11 10 35 35 H 1.09000 * 109.47263 * 304.99593 * 16 14 13 36 36 H 1.09001 * 109.47433 * 64.99749 * 16 14 13 37 37 H 1.08003 * 125.95768 * 0.03751 * 18 17 16 38 38 H 1.08001 * 125.52764 * 179.80321 * 20 19 18 39 39 H 1.08993 * 113.61752 * 334.56720 * 22 11 10 40 40 H 1.09001 * 113.61356 * 105.47564 * 22 11 10 41 41 H 1.08997 * 109.62136 * 301.05882 * 23 7 6 42 42 H 1.08992 * 109.77674 * 180.59429 * 23 7 6 43 43 H 1.09003 * 109.33278 * 320.28914 * 24 4 2 44 44 H 1.09008 * 109.33209 * 79.94403 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 2.5116 -0.0029 2.1695 6 7 2.9975 -0.5868 3.3327 7 6 3.1185 -2.0496 3.3975 8 6 3.2526 -2.4902 4.8324 9 8 2.9215 -1.7439 5.7293 10 7 3.7403 -3.7134 5.1189 11 6 3.8702 -4.1419 6.5139 12 1 3.1767 -3.6293 7.1805 13 6 3.8791 -5.6694 6.6908 14 6 4.9727 -5.4615 7.7518 15 1 4.5817 -5.3108 8.7580 16 6 6.0862 -6.5091 7.6978 17 7 7.0103 -6.2978 8.8148 18 6 7.3698 -7.1994 9.7448 19 7 8.2110 -6.6235 10.5648 20 6 8.4058 -5.3578 10.1971 21 7 7.6918 -5.1110 9.1303 22 6 5.3213 -4.1509 7.0230 23 6 1.8467 -2.6529 2.7843 24 6 1.7456 -2.1978 1.3266 25 1 -0.3932 0.4416 0.7651 26 1 1.7924 -0.5139 -0.8900 27 1 1.5615 2.4678 -1.2085 28 1 1.5880 2.4585 1.2243 29 1 2.6189 1.0630 2.0328 30 1 3.2499 -0.0380 4.0917 31 1 3.9912 -2.3702 2.8285 32 1 4.0054 -4.3102 4.4016 33 1 2.9485 -6.0677 7.0952 34 1 4.2223 -6.2093 5.8081 35 1 5.6511 -7.5059 7.7699 36 1 6.6272 -6.4162 6.7561 37 1 7.0260 -8.2216 9.8034 38 1 9.0497 -4.6505 10.6987 39 1 6.0608 -4.2746 6.2320 40 1 5.5532 -3.3248 7.6953 41 1 0.9737 -2.3063 3.3373 42 1 1.8977 -3.7408 2.8254 43 1 0.7651 -2.4652 0.9324 44 1 2.5181 -2.6966 0.7411 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14644236_15413834.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:08:23 Heat of formation + Delta-G solvation = 74.984403 kcal Electronic energy + Delta-G solvation = -26278.876587 eV Core-core repulsion = 22428.930701 eV Total energy + Delta-G solvation = -3849.945885 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 320.164 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -42.96454 -41.58052 -40.26696 -39.16709 -37.46982 -35.51096 -34.17511 -33.20995 -32.79734 -32.14418 -29.17537 -27.50236 -26.72666 -25.50932 -24.51221 -23.52314 -22.84960 -22.40126 -21.67077 -20.75981 -19.40814 -19.04983 -18.32239 -18.08005 -17.46268 -16.88075 -16.69031 -16.47763 -16.13029 -16.03896 -15.72305 -15.59548 -15.26336 -15.20439 -15.01760 -14.59010 -14.43308 -14.08642 -13.89922 -13.66720 -13.44546 -13.16084 -13.15316 -12.92649 -12.86506 -12.34103 -12.22208 -11.97340 -11.90645 -11.67920 -11.40707 -11.24254 -10.97820 -10.87828 -10.77728 -10.55204 -10.32393 -10.11207 -8.46863 -4.91720 0.71937 1.33034 1.38833 1.45340 1.48061 1.57078 1.92022 1.98616 2.02580 2.63511 3.31212 3.43808 3.50447 3.55312 3.59248 3.69082 3.73011 3.78349 3.87118 3.94559 4.06688 4.13438 4.20665 4.31978 4.34897 4.47241 4.58099 4.61358 4.65960 4.72159 4.72551 4.80647 4.82239 4.97906 5.04918 5.05931 5.16151 5.22626 5.30314 5.35457 5.46983 5.52597 5.58600 5.97173 6.24445 6.46878 6.60139 6.78763 7.11963 7.15197 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.557 6.557 2 C -0.055 4.055 3 Si 0.745 3.255 4 C -0.279 4.279 5 C 0.135 3.865 6 N -0.738 5.738 7 C 0.138 3.862 8 C 0.511 3.489 9 O -0.580 6.580 10 N -0.698 5.698 11 C 0.115 3.885 12 H 0.085 0.915 13 C -0.112 4.112 14 C -0.113 4.113 15 H 0.081 0.919 16 C 0.135 3.865 17 N -0.379 5.379 18 C 0.256 3.744 19 N -0.586 5.586 20 C 0.182 3.818 21 N -0.344 5.344 22 C -0.135 4.135 23 C -0.120 4.120 24 C -0.054 4.054 25 H 0.381 0.619 26 H 0.116 0.884 27 H -0.311 1.311 28 H -0.292 1.292 29 H 0.139 0.861 30 H 0.405 0.595 31 H 0.118 0.882 32 H 0.421 0.579 33 H 0.089 0.911 34 H 0.124 0.876 35 H 0.144 0.856 36 H 0.102 0.898 37 H 0.260 0.740 38 H 0.228 0.772 39 H 0.095 0.905 40 H 0.041 0.959 41 H 0.049 0.951 42 H 0.104 0.896 43 H 0.067 0.933 44 H 0.085 0.915 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.102 -8.039 -3.271 8.930 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.364 6.364 2 C -0.166 4.166 3 Si 0.654 3.346 4 C -0.290 4.290 5 C 0.014 3.986 6 N -0.370 5.370 7 C 0.030 3.970 8 C 0.298 3.702 9 O -0.460 6.460 10 N -0.349 5.349 11 C 0.009 3.991 12 H 0.104 0.896 13 C -0.150 4.150 14 C -0.133 4.133 15 H 0.099 0.901 16 C 0.014 3.986 17 N -0.170 5.170 18 C -0.040 4.040 19 N -0.314 5.314 20 C -0.120 4.120 21 N -0.172 5.172 22 C -0.173 4.173 23 C -0.159 4.159 24 C -0.091 4.091 25 H 0.229 0.771 26 H 0.134 0.866 27 H -0.240 1.240 28 H -0.220 1.220 29 H 0.156 0.844 30 H 0.241 0.759 31 H 0.136 0.864 32 H 0.260 0.740 33 H 0.108 0.892 34 H 0.142 0.858 35 H 0.162 0.838 36 H 0.120 0.880 37 H 0.275 0.725 38 H 0.245 0.755 39 H 0.113 0.887 40 H 0.060 0.940 41 H 0.068 0.932 42 H 0.123 0.877 43 H 0.086 0.914 44 H 0.104 0.896 Dipole moment (debyes) X Y Z Total from point charges 1.859 -6.626 -3.374 7.665 hybrid contribution -1.098 0.401 0.844 1.442 sum 0.761 -6.225 -2.531 6.762 Atomic orbital electron populations 1.86540 1.19811 1.80172 1.49921 1.24818 0.82540 1.09729 0.99475 0.94559 0.90987 0.73740 0.75348 1.20927 1.11192 0.97382 0.99471 1.20594 0.94094 0.97194 0.86680 1.44394 1.72208 1.04813 1.15616 1.21132 1.01175 0.82893 0.91838 1.20989 0.75836 0.82183 0.91238 1.90726 1.50860 1.54643 1.49724 1.45784 1.64112 1.16002 1.09031 1.22477 0.97134 0.96792 0.82660 0.89641 1.23294 0.98935 0.93406 0.99370 1.22528 0.96085 0.95345 0.99325 0.90068 1.22231 0.87757 1.01786 0.86809 1.50794 1.34551 1.07667 1.23972 1.26915 0.92720 0.99130 0.85248 1.70540 1.21414 1.08522 1.30966 1.26429 0.98803 0.93728 0.93073 1.78008 1.13582 1.06534 1.19090 1.23455 0.96777 0.97445 0.99669 1.21826 0.95387 1.01888 0.96779 1.19991 1.02519 0.91615 0.94976 0.77086 0.86577 1.24036 1.21968 0.84397 0.75927 0.86421 0.74045 0.89222 0.85811 0.83808 0.87996 0.72483 0.75549 0.88654 0.93957 0.93212 0.87749 0.91441 0.89631 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -2.41 12.88 -148.98 -1.92 -4.33 16 2 C -0.06 -0.01 2.81 71.24 0.20 0.19 16 3 Si 0.75 -0.17 29.95 68.60 2.05 1.88 16 4 C -0.28 0.24 5.37 -16.76 -0.09 0.15 16 5 C 0.14 -0.09 9.62 83.42 0.80 0.71 16 6 N -0.74 -0.04 5.47 -329.21 -1.80 -1.84 16 7 C 0.14 -0.49 3.35 44.35 0.15 -0.34 16 8 C 0.51 0.17 7.10 87.66 0.62 0.80 16 9 O -0.58 -6.07 15.69 -3.03 -0.05 -6.11 16 10 N -0.70 4.54 5.36 -440.04 -2.36 2.18 16 11 C 0.11 -0.51 4.21 45.51 0.19 -0.32 16 12 H 0.09 0.19 7.50 -2.39 -0.02 0.17 16 13 C -0.11 1.33 7.39 31.12 0.23 1.56 16 14 C -0.11 0.87 3.85 -10.21 -0.04 0.83 16 15 H 0.08 -0.27 8.14 -2.39 -0.02 -0.29 16 16 C 0.13 -1.39 6.39 86.38 0.55 -0.84 16 17 N -0.38 0.68 3.69 -352.07 -1.30 -0.62 16 18 C 0.26 -0.57 12.63 180.36 2.28 1.71 16 19 N -0.59 -3.15 11.19 -203.99 -2.28 -5.43 16 20 C 0.18 0.92 13.03 180.76 2.36 3.28 16 21 N -0.34 -1.80 12.57 -61.24 -0.77 -2.57 16 22 C -0.13 0.43 7.45 31.18 0.23 0.67 16 23 C -0.12 0.48 5.48 30.79 0.17 0.65 16 24 C -0.05 0.16 5.85 29.71 0.17 0.33 16 25 H 0.38 -0.14 8.70 -74.06 -0.64 -0.78 16 26 H 0.12 -0.16 7.96 -2.39 -0.02 -0.18 16 27 H -0.31 -2.59 7.11 99.48 0.71 -1.88 16 28 H -0.29 -1.19 6.84 99.48 0.68 -0.51 16 29 H 0.14 -0.33 4.30 -2.91 -0.01 -0.34 16 30 H 0.40 0.75 8.09 -92.71 -0.75 0.00 16 31 H 0.12 -1.00 8.14 -2.38 -0.02 -1.02 16 32 H 0.42 -5.85 8.71 -92.71 -0.81 -6.66 16 33 H 0.09 -1.08 8.14 -2.39 -0.02 -1.10 16 34 H 0.12 -2.17 8.07 -2.38 -0.02 -2.19 16 35 H 0.14 -2.57 8.09 -2.39 -0.02 -2.59 16 36 H 0.10 -1.21 7.85 -2.39 -0.02 -1.22 16 37 H 0.26 -3.29 8.06 -2.91 -0.02 -3.31 16 38 H 0.23 -0.03 8.06 -2.91 -0.02 -0.06 16 39 H 0.10 -0.46 7.90 -2.39 -0.02 -0.48 16 40 H 0.04 0.18 8.14 -2.39 -0.02 0.16 16 41 H 0.05 0.08 8.14 -2.39 -0.02 0.06 16 42 H 0.10 -0.97 8.14 -2.39 -0.02 -0.99 16 43 H 0.07 -0.03 8.14 -2.39 -0.02 -0.04 16 44 H 0.09 -0.53 8.14 -2.38 -0.02 -0.55 16 Total: 0.00 -29.54 363.69 -1.74 -31.28 By element: Atomic # 1 Polarization: -22.67 SS G_CDS: -1.14 Total: -23.81 kcal Atomic # 6 Polarization: 1.55 SS G_CDS: 7.82 Total: 9.38 kcal Atomic # 7 Polarization: 0.23 SS G_CDS: -8.51 Total: -8.29 kcal Atomic # 8 Polarization: -8.47 SS G_CDS: -1.97 Total: -10.44 kcal Atomic # 14 Polarization: -0.17 SS G_CDS: 2.05 Total: 1.88 kcal Total: -29.54 -1.74 -31.28 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14644236_15413834.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 106.263 kcal (2) G-P(sol) polarization free energy of solvation -29.538 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 76.725 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.740 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.279 kcal (6) G-S(sol) free energy of system = (1) + (5) 74.984 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds