Wall clock time and date at job start Sun Mar 7 2021 00:08:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86304 * 109.46868 * 2 1 4 4 C 1.50696 * 109.47338 * 240.00355 * 2 1 3 5 5 C 1.31116 * 118.54763 * 119.99803 * 4 2 1 6 6 N 1.38927 * 121.84516 * 180.44404 * 5 4 2 7 7 C 1.47027 * 118.88522 * 346.66741 * 6 5 4 8 8 C 1.53537 * 107.66105 * 43.66155 * 7 6 5 9 9 C 1.50627 * 118.46796 * 300.03734 * 4 2 1 10 10 C 1.50703 * 109.55249 * 39.72207 * 9 4 2 11 11 O 1.21277 * 119.99759 * 120.71869 * 10 9 4 12 12 N 1.34774 * 119.99757 * 300.71188 * 10 9 4 13 13 C 1.46503 * 119.99619 * 180.02562 * 12 10 9 14 14 H 1.09007 * 112.84935 * 334.66722 * 13 12 10 15 15 C 1.53780 * 113.61775 * 105.86387 * 13 12 10 16 16 C 1.53949 * 87.01829 * 139.95019 * 15 13 12 17 17 H 1.08996 * 113.61576 * 89.20606 * 16 15 13 18 18 C 1.53007 * 113.66436 * 220.06964 * 16 15 13 19 19 N 1.46507 * 109.47035 * 272.56131 * 18 16 15 20 20 C 1.34420 * 126.82075 * 124.71140 * 19 18 16 21 21 N 1.30836 * 108.07879 * 179.89359 * 20 19 18 22 22 C 1.33250 * 109.82409 * 0.37916 * 21 20 19 23 23 N 1.30716 * 108.94670 * 359.76675 * 22 21 20 24 24 C 1.53775 * 87.11693 * 334.63879 * 16 15 13 25 25 H 0.96697 * 114.00626 * 299.99958 * 1 2 3 26 26 H 1.08996 * 109.47022 * 119.99277 * 2 1 3 27 27 H 1.48504 * 110.00034 * 300.00017 * 3 2 1 28 28 H 1.48503 * 109.99978 * 61.31447 * 3 2 1 29 29 H 1.07998 * 119.07891 * 0.43042 * 5 4 2 30 30 H 0.97002 * 120.55253 * 166.68690 * 6 5 4 31 31 H 1.08999 * 109.82114 * 284.11975 * 7 6 5 32 32 H 1.09000 * 109.81723 * 163.20116 * 7 6 5 33 33 H 1.09002 * 109.62272 * 58.77362 * 8 7 6 34 34 H 1.09001 * 109.62157 * 179.14540 * 8 7 6 35 35 H 1.09000 * 109.33878 * 280.09573 * 9 4 2 36 36 H 0.96998 * 120.00030 * 0.02562 * 12 10 9 37 37 H 1.08999 * 113.61414 * 254.53349 * 15 13 12 38 38 H 1.09007 * 113.60999 * 25.42710 * 15 13 12 39 39 H 1.08990 * 109.47281 * 32.55960 * 18 16 15 40 40 H 1.09003 * 109.46995 * 152.56504 * 18 16 15 41 41 H 1.07998 * 125.96828 * 0.03688 * 20 19 18 42 42 H 1.08000 * 125.52297 * 179.72428 * 22 21 20 43 43 H 1.08999 * 113.61673 * 270.81697 * 24 16 15 44 44 H 1.08998 * 113.61909 * 139.90624 * 24 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7103 -1.2305 5 6 2.6832 -0.0458 -2.0745 6 7 3.1758 -0.6303 -3.2346 7 6 3.1005 -2.0913 -3.3810 8 6 1.7092 -2.5358 -2.9074 9 6 1.5459 -2.1520 -1.4350 10 6 0.1102 -2.3534 -1.0233 11 8 -0.6995 -2.7630 -1.8279 12 7 -0.2737 -2.0785 0.2390 13 6 -1.6692 -2.2749 0.6394 14 1 -2.3630 -2.2115 -0.1990 15 6 -1.8873 -3.5113 1.5273 16 6 -2.8728 -2.6533 2.3413 17 1 -3.8968 -2.6939 1.9701 18 6 -2.7792 -2.8773 3.8520 19 7 -3.6502 -3.9912 4.2355 20 6 -3.2922 -5.0998 4.9061 21 7 -4.3562 -5.8470 5.0527 22 6 -5.4059 -5.2550 4.4842 23 7 -5.0237 -4.1157 3.9700 24 6 -2.0879 -1.4253 1.8509 25 1 -0.3934 0.4417 0.7650 26 1 1.7923 -0.5137 0.8900 27 1 1.5614 2.4679 -1.2085 28 1 1.5877 2.4586 1.2242 29 1 2.9262 0.9848 -1.8621 30 1 3.5631 -0.0836 -3.9361 31 1 3.8680 -2.5642 -2.7684 32 1 3.2401 -2.3656 -4.4267 33 1 0.9436 -2.0381 -3.5026 34 1 1.6132 -3.6161 -3.0169 35 1 2.1865 -2.7872 -0.8233 36 1 0.3739 -1.7507 0.8824 37 1 -2.3591 -4.3448 1.0069 38 1 -1.0007 -3.8083 2.0877 39 1 -1.7495 -3.1118 4.1215 40 1 -3.0945 -1.9735 4.3735 41 1 -2.3000 -5.3322 5.2637 42 1 -6.4096 -5.6526 4.4528 43 1 -1.2563 -1.1508 2.4999 44 1 -2.7215 -0.5772 1.5914 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14644236_15608500.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:08:27 Heat of formation + Delta-G solvation = 106.236459 kcal Electronic energy + Delta-G solvation = -27696.240049 eV Core-core repulsion = 23847.649355 eV Total energy + Delta-G solvation = -3848.590694 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 320.164 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -42.95637 -41.59474 -40.21473 -38.71208 -37.93121 -35.25935 -33.92346 -33.20062 -32.88464 -32.09350 -29.16317 -27.34621 -26.88143 -26.08167 -24.18644 -23.16065 -22.93283 -22.39022 -21.50255 -20.66456 -19.26462 -18.73269 -18.49962 -18.40852 -17.76030 -17.37873 -16.78259 -16.32790 -16.32027 -15.83198 -15.67649 -15.32062 -15.16449 -14.98356 -14.88620 -14.56438 -14.38735 -13.96901 -13.73584 -13.68418 -13.59980 -13.29086 -13.08115 -13.03105 -12.64233 -12.45499 -12.24863 -11.93858 -11.83675 -11.71248 -11.56999 -11.34378 -10.89063 -10.69643 -10.61724 -10.57784 -10.40039 -9.42248 -8.52603 -5.01042 0.71806 1.13416 1.32318 1.34183 1.52648 1.90414 2.03547 2.09321 2.39536 2.52096 3.24807 3.31341 3.37470 3.42276 3.45593 3.65310 3.71716 3.79684 3.83962 3.95499 4.01276 4.05622 4.10907 4.23016 4.24706 4.32454 4.36784 4.39682 4.47222 4.55471 4.63184 4.70268 4.77094 4.84336 4.89912 4.93218 5.16588 5.25851 5.32199 5.32601 5.38237 5.52515 5.74643 5.85629 6.21770 6.38934 6.74137 6.78050 7.18039 7.57042 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.520 6.520 2 C -0.059 4.059 3 Si 0.657 3.343 4 C -0.238 4.238 5 C 0.159 3.841 6 N -0.747 5.747 7 C 0.119 3.881 8 C -0.121 4.121 9 C -0.040 4.040 10 C 0.538 3.462 11 O -0.550 6.550 12 N -0.686 5.686 13 C 0.136 3.864 14 H 0.112 0.888 15 C -0.151 4.151 16 C -0.121 4.121 17 H 0.108 0.892 18 C 0.141 3.859 19 N -0.377 5.377 20 C 0.253 3.747 21 N -0.547 5.547 22 C 0.198 3.802 23 N -0.317 5.317 24 C -0.137 4.137 25 H 0.364 0.636 26 H 0.065 0.935 27 H -0.259 1.259 28 H -0.265 1.265 29 H 0.133 0.867 30 H 0.404 0.596 31 H 0.064 0.936 32 H 0.083 0.917 33 H 0.079 0.921 34 H 0.080 0.920 35 H 0.093 0.907 36 H 0.398 0.602 37 H 0.071 0.929 38 H 0.084 0.916 39 H 0.102 0.898 40 H 0.092 0.908 41 H 0.217 0.783 42 H 0.217 0.783 43 H 0.087 0.913 44 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.505 2.845 2.217 9.238 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.327 6.327 2 C -0.169 4.169 3 Si 0.559 3.441 4 C -0.249 4.249 5 C 0.037 3.963 6 N -0.377 5.377 7 C -0.005 4.005 8 C -0.159 4.159 9 C -0.061 4.061 10 C 0.325 3.675 11 O -0.428 6.428 12 N -0.339 5.339 13 C 0.030 3.970 14 H 0.130 0.870 15 C -0.189 4.189 16 C -0.141 4.141 17 H 0.126 0.874 18 C 0.019 3.981 19 N -0.168 5.168 20 C -0.044 4.044 21 N -0.274 5.274 22 C -0.105 4.105 23 N -0.145 5.145 24 C -0.176 4.176 25 H 0.212 0.788 26 H 0.083 0.917 27 H -0.184 1.184 28 H -0.190 1.190 29 H 0.150 0.850 30 H 0.239 0.761 31 H 0.082 0.918 32 H 0.101 0.899 33 H 0.098 0.902 34 H 0.098 0.902 35 H 0.111 0.889 36 H 0.236 0.764 37 H 0.090 0.910 38 H 0.103 0.897 39 H 0.120 0.880 40 H 0.110 0.890 41 H 0.233 0.767 42 H 0.233 0.767 43 H 0.106 0.894 44 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges 7.377 3.192 0.860 8.084 hybrid contribution -0.490 0.396 0.753 0.981 sum 6.887 3.588 1.613 7.931 Atomic orbital electron populations 1.87103 1.17905 1.77593 1.50074 1.24464 0.84603 1.09655 0.98229 0.95559 0.92793 0.75546 0.80172 1.19606 1.08520 0.95930 1.00828 1.20294 0.93277 0.96127 0.86643 1.44570 1.67587 1.06863 1.18644 1.21666 0.96729 0.80439 1.01673 1.21716 0.97441 1.02151 0.94635 1.19765 0.93715 0.94587 0.98067 1.20220 0.89960 0.75604 0.81726 1.90684 1.54340 1.46413 1.51372 1.45979 1.09841 1.65957 1.12138 1.22211 0.84525 0.94446 0.95792 0.87025 1.23649 0.98770 0.98273 0.98254 1.22730 1.00894 0.97663 0.92776 0.87357 1.21877 0.92452 0.87678 0.96071 1.50558 1.07064 1.17339 1.41817 1.26084 1.00406 0.84014 0.93931 1.70567 0.98541 1.32202 1.26114 1.26056 0.99912 0.89789 0.94699 1.78040 0.90075 1.21383 1.25007 1.23356 0.99890 0.97224 0.97097 0.78779 0.91723 1.18409 1.18995 0.85003 0.76115 0.91814 0.89868 0.90225 0.90170 0.88895 0.76419 0.91009 0.89720 0.87990 0.89028 0.76653 0.76685 0.89441 0.90046 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 0.57 7.75 -35.23 -0.27 0.30 16 2 C -0.06 0.14 1.82 36.00 0.07 0.21 16 3 Si 0.66 -1.46 29.68 -169.99 -5.04 -6.50 16 4 C -0.24 0.16 5.31 -101.13 -0.54 -0.37 16 5 C 0.16 -0.20 9.63 -16.08 -0.15 -0.36 16 6 N -0.75 1.43 5.83 -60.69 -0.35 1.08 16 7 C 0.12 -0.23 7.16 -3.48 -0.02 -0.26 16 8 C -0.12 -0.07 4.89 -26.43 -0.13 -0.20 16 9 C -0.04 -0.01 2.76 -92.94 -0.26 -0.27 16 10 C 0.54 1.46 6.33 -10.98 -0.07 1.39 16 11 O -0.55 -4.00 15.42 5.56 0.09 -3.92 16 12 N -0.69 0.45 2.82 -53.01 -0.15 0.30 16 13 C 0.14 -0.08 3.95 -67.12 -0.27 -0.34 16 14 H 0.11 0.30 7.50 -51.92 -0.39 -0.09 16 15 C -0.15 0.18 7.45 -25.83 -0.19 -0.01 16 16 C -0.12 0.25 3.88 -89.72 -0.35 -0.10 16 17 H 0.11 0.05 8.00 -51.93 -0.42 -0.37 16 18 C 0.14 -0.42 6.39 -4.03 -0.03 -0.44 16 19 N -0.38 -0.18 3.69 -62.63 -0.23 -0.42 16 20 C 0.25 0.08 12.63 -90.66 -1.14 -1.07 16 21 N -0.55 -1.80 11.19 -15.83 -0.18 -1.97 16 22 C 0.20 0.54 13.03 -91.80 -1.20 -0.66 16 23 N -0.32 -1.02 12.45 29.29 0.36 -0.66 16 24 C -0.14 0.48 6.58 -25.92 -0.17 0.31 16 25 H 0.36 -1.48 8.11 45.56 0.37 -1.11 16 26 H 0.07 -0.32 7.08 -51.93 -0.37 -0.68 16 27 H -0.26 -0.44 7.11 56.52 0.40 -0.04 16 28 H -0.26 -0.04 7.11 56.52 0.40 0.36 16 29 H 0.13 -0.38 4.37 -52.49 -0.23 -0.61 16 30 H 0.40 -1.49 8.96 -40.82 -0.37 -1.85 16 31 H 0.06 -0.17 8.14 -51.93 -0.42 -0.59 16 32 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 33 H 0.08 0.27 7.77 -51.93 -0.40 -0.13 16 34 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 35 H 0.09 -0.13 8.14 -51.93 -0.42 -0.56 16 36 H 0.40 -1.24 5.74 -40.82 -0.23 -1.47 16 37 H 0.07 0.09 8.14 -51.93 -0.42 -0.33 16 38 H 0.08 -0.21 7.90 -51.92 -0.41 -0.62 16 39 H 0.10 -0.59 7.79 -51.93 -0.40 -0.99 16 40 H 0.09 -0.31 8.14 -51.93 -0.42 -0.73 16 41 H 0.22 -0.90 8.06 -52.49 -0.42 -1.32 16 42 H 0.22 -0.07 8.06 -52.49 -0.42 -0.49 16 43 H 0.09 -0.50 8.07 -51.93 -0.42 -0.92 16 44 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 LS Contribution 349.24 15.07 5.26 5.26 Total: 0.00 -11.75 349.24 -11.24 -22.98 By element: Atomic # 1 Polarization: -8.02 SS G_CDS: -6.27 Total: -14.30 kcal Atomic # 6 Polarization: 2.28 SS G_CDS: -4.45 Total: -2.17 kcal Atomic # 7 Polarization: -1.12 SS G_CDS: -0.55 Total: -1.66 kcal Atomic # 8 Polarization: -3.43 SS G_CDS: -0.19 Total: -3.61 kcal Atomic # 14 Polarization: -1.46 SS G_CDS: -5.04 Total: -6.50 kcal Total LS contribution 5.26 Total: 5.26 kcal Total: -11.75 -11.24 -22.98 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14644236_15608500.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 129.221 kcal (2) G-P(sol) polarization free energy of solvation -11.748 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 117.473 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.237 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.985 kcal (6) G-S(sol) free energy of system = (1) + (5) 106.236 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds