Wall clock time and date at job start Sun Mar 7 2021 00:08:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86303 * 109.47309 * 2 1 4 4 C 1.50696 * 109.47243 * 239.99617 * 2 1 3 5 5 C 1.34499 * 125.49202 * 149.97440 * 4 2 1 6 6 C 1.46751 * 106.36168 * 180.02562 * 5 4 2 7 7 C 1.47273 * 126.96870 * 179.97438 * 6 5 4 8 8 O 1.21625 * 119.99972 * 180.02562 * 7 6 5 9 9 N 1.34779 * 119.99580 * 0.02769 * 7 6 5 10 10 C 1.46494 * 119.99525 * 179.97438 * 9 7 6 11 11 H 1.09000 * 112.91148 * 23.75262 * 10 9 7 12 12 C 1.53786 * 113.61370 * 155.00031 * 10 9 7 13 13 C 1.53781 * 87.17350 * 140.02367 * 12 10 9 14 14 H 1.08999 * 113.61567 * 89.07405 * 13 12 10 15 15 C 1.52991 * 113.61529 * 219.97788 * 13 12 10 16 16 N 1.46508 * 109.47429 * 184.99923 * 15 13 12 17 17 C 1.34426 * 126.81984 * 124.70705 * 16 15 13 18 18 N 1.30840 * 108.07312 * 179.89701 * 17 16 15 19 19 C 1.33244 * 109.82711 * 0.38357 * 18 17 16 20 20 N 1.30709 * 108.94622 * 359.76066 * 19 18 17 21 21 C 1.53781 * 87.08070 * 334.52830 * 13 12 10 22 22 C 1.36333 * 106.06441 * 0.25428 * 6 5 4 23 23 C 1.51004 * 126.79199 * 179.80465 * 22 6 5 24 24 C 1.53394 * 108.24536 * 164.25591 * 23 22 6 25 25 C 1.53154 * 109.04365 * 48.47933 * 24 23 22 26 26 C 1.53375 * 109.31460 * 290.19583 * 25 24 23 27 27 N 1.35216 * 108.66027 * 359.59265 * 22 6 5 28 28 H 0.96701 * 113.99503 * 300.00130 * 1 2 3 29 29 H 1.09003 * 109.47060 * 119.99744 * 2 1 3 30 30 H 1.48494 * 110.00263 * 178.68231 * 3 2 1 31 31 H 1.48502 * 109.99534 * 299.99849 * 3 2 1 32 32 H 1.07993 * 126.81852 * 0.02562 * 5 4 2 33 33 H 0.97000 * 119.99938 * 359.97438 * 9 7 6 34 34 H 1.09002 * 113.61357 * 25.43283 * 12 10 9 35 35 H 1.09002 * 113.61608 * 254.61445 * 12 10 9 36 36 H 1.08997 * 109.47550 * 304.99814 * 15 13 12 37 37 H 1.09002 * 109.47334 * 65.00084 * 15 13 12 38 38 H 1.07996 * 125.96554 * 0.04585 * 17 16 15 39 39 H 1.07998 * 125.52380 * 179.80008 * 19 18 17 40 40 H 1.09005 * 113.61471 * 139.98321 * 21 13 12 41 41 H 1.09003 * 113.61469 * 270.88099 * 21 13 12 42 42 H 1.09005 * 109.70479 * 283.94206 * 23 22 6 43 43 H 1.09001 * 109.70874 * 44.52023 * 23 22 6 44 44 H 1.09001 * 109.53938 * 168.35279 * 24 23 22 45 45 H 1.09005 * 109.54285 * 288.52167 * 24 23 22 46 46 H 1.09000 * 109.45796 * 50.44453 * 25 24 23 47 47 H 1.09004 * 109.45816 * 170.40471 * 25 24 23 48 48 H 1.08997 * 110.12629 * 291.23513 * 26 25 24 49 49 H 1.09003 * 109.09241 * 170.84457 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 3.0856 -0.4460 -1.8682 6 6 3.1549 -1.3771 -3.0005 7 6 4.2325 -1.4784 -3.9991 8 8 4.1594 -2.3018 -4.8913 9 7 5.2997 -0.6586 -3.9244 10 6 6.3719 -0.7597 -4.9174 11 1 6.0398 -1.2014 -5.8570 12 6 7.1700 0.5425 -5.0972 13 6 8.4307 -0.3329 -5.1929 14 1 8.6604 -0.6581 -6.2076 15 6 9.6422 0.2561 -4.4677 16 7 10.8161 -0.5848 -4.7155 17 6 11.9969 -0.1906 -5.2230 18 7 12.7812 -1.2360 -5.2854 19 6 12.1364 -2.3122 -4.8366 20 7 10.9292 -1.9640 -4.4759 21 6 7.6688 -1.3828 -4.3671 22 6 2.0164 -2.1250 -2.9441 23 6 1.6095 -3.2258 -3.8944 24 6 0.4858 -4.0369 -3.2368 25 6 -0.5761 -3.0739 -2.6978 26 6 -0.0054 -2.3102 -1.4964 27 7 1.2884 -1.7250 -1.8772 28 1 -0.3932 0.4417 0.7651 29 1 1.7923 -0.5138 0.8900 30 1 3.5346 1.7703 0.0321 31 1 1.5615 2.4678 -1.2086 32 1 3.8162 0.3027 -1.6004 33 1 5.3578 -0.0017 -3.2130 34 1 7.1532 1.1895 -4.2201 35 1 6.9364 1.0740 -6.0197 36 1 9.8326 1.2636 -4.8373 37 1 9.4419 0.2937 -3.3969 38 1 12.2541 0.8141 -5.5241 39 1 12.5452 -3.3102 -4.7794 40 1 7.8372 -2.4069 -4.7007 41 1 7.7885 -1.2623 -3.2904 42 1 1.2516 -2.7916 -4.8280 43 1 2.4632 -3.8735 -4.0937 44 1 0.0354 -4.7006 -3.9748 45 1 0.8943 -4.6274 -2.4166 46 1 -0.8593 -2.3705 -3.4809 47 1 -1.4533 -3.6396 -2.3835 48 1 0.1340 -2.9871 -0.6536 49 1 -0.6975 -1.5155 -1.2177 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14644236_16915396.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:08:31 Heat of formation + Delta-G solvation = 95.279625 kcal Electronic energy + Delta-G solvation = -31703.899868 eV Core-core repulsion = 27442.844150 eV Total energy + Delta-G solvation = -4261.055718 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.179 amu Computer time = 1.28 seconds Orbital eigenvalues (eV) -42.93656 -42.73732 -40.89367 -39.15753 -38.00662 -36.91130 -35.35045 -33.86988 -33.41291 -32.07398 -31.26954 -29.76277 -28.82776 -26.79025 -26.65226 -24.95872 -24.58041 -23.41472 -22.83957 -22.17499 -21.69762 -21.19560 -20.68982 -19.41218 -18.60976 -18.34234 -18.08851 -17.19784 -16.86352 -16.78518 -16.41386 -16.06540 -16.00652 -15.71296 -15.61439 -15.50683 -15.22138 -15.11895 -14.93437 -14.69317 -14.51289 -14.42153 -14.09236 -13.85761 -13.68172 -13.52382 -13.28248 -13.10173 -12.95787 -12.85579 -12.51407 -12.25593 -12.11099 -12.04403 -11.93076 -11.83762 -11.74215 -11.43671 -10.87768 -10.74344 -10.68069 -10.63431 -10.54566 -9.91170 -9.55095 -8.99084 -5.10782 0.73733 0.85293 0.95321 1.36078 1.36177 1.58494 1.82759 1.96657 2.10986 2.46590 2.67473 3.00157 3.17219 3.37069 3.44567 3.50649 3.52295 3.57163 3.71647 3.72837 3.78344 3.79995 3.92269 3.99657 4.04055 4.10774 4.19233 4.26416 4.28188 4.36830 4.42550 4.44609 4.58547 4.60698 4.65221 4.66500 4.71856 4.77049 4.84474 4.89615 4.92051 5.04032 5.10150 5.16295 5.18123 5.25978 5.36694 5.54744 5.64696 5.73699 5.86889 6.08993 6.22408 6.37679 6.71851 7.20068 7.50288 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.552 6.552 2 C -0.048 4.048 3 Si 0.710 3.290 4 C 0.037 3.963 5 C -0.178 4.178 6 C -0.235 4.235 7 C 0.596 3.404 8 O -0.547 6.547 9 N -0.719 5.719 10 C 0.126 3.874 11 H 0.117 0.883 12 C -0.138 4.138 13 C -0.119 4.119 14 H 0.100 0.900 15 C 0.140 3.860 16 N -0.378 5.378 17 C 0.251 3.749 18 N -0.547 5.547 19 C 0.196 3.804 20 N -0.311 5.311 21 C -0.135 4.135 22 C 0.122 3.878 23 C -0.055 4.055 24 C -0.130 4.130 25 C -0.138 4.138 26 C 0.102 3.898 27 N -0.421 5.421 28 H 0.387 0.613 29 H 0.078 0.922 30 H -0.255 1.255 31 H -0.252 1.252 32 H 0.144 0.856 33 H 0.399 0.601 34 H 0.090 0.910 35 H 0.081 0.919 36 H 0.105 0.895 37 H 0.091 0.909 38 H 0.218 0.782 39 H 0.216 0.784 40 H 0.077 0.923 41 H 0.085 0.915 42 H 0.089 0.911 43 H 0.101 0.899 44 H 0.080 0.920 45 H 0.068 0.932 46 H 0.075 0.925 47 H 0.088 0.912 48 H 0.081 0.919 49 H 0.112 0.888 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.251 5.350 5.635 8.857 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.359 6.359 2 C -0.158 4.158 3 Si 0.609 3.391 4 C -0.072 4.072 5 C -0.202 4.202 6 C -0.244 4.244 7 C 0.386 3.614 8 O -0.425 6.425 9 N -0.369 5.369 10 C 0.020 3.980 11 H 0.135 0.865 12 C -0.177 4.177 13 C -0.139 4.139 14 H 0.118 0.882 15 C 0.018 3.982 16 N -0.170 5.170 17 C -0.046 4.046 18 N -0.274 5.274 19 C -0.107 4.107 20 N -0.139 5.139 21 C -0.173 4.173 22 C 0.004 3.996 23 C -0.093 4.093 24 C -0.167 4.167 25 C -0.176 4.176 26 C -0.019 4.019 27 N -0.097 5.097 28 H 0.236 0.764 29 H 0.095 0.905 30 H -0.179 1.179 31 H -0.176 1.176 32 H 0.161 0.839 33 H 0.233 0.767 34 H 0.108 0.892 35 H 0.100 0.900 36 H 0.123 0.877 37 H 0.109 0.891 38 H 0.234 0.766 39 H 0.233 0.767 40 H 0.095 0.905 41 H 0.104 0.896 42 H 0.107 0.893 43 H 0.119 0.881 44 H 0.098 0.902 45 H 0.087 0.913 46 H 0.093 0.907 47 H 0.107 0.893 48 H 0.099 0.901 49 H 0.130 0.870 Dipole moment (debyes) X Y Z Total from point charges -4.344 4.469 4.353 7.602 hybrid contribution 0.176 0.073 0.273 0.333 sum -4.168 4.542 4.626 7.707 Atomic orbital electron populations 1.86372 1.17472 1.81838 1.50233 1.24459 0.85341 1.10445 0.95509 0.95488 0.80739 0.75330 0.87588 1.19639 0.94970 0.94264 0.98326 1.21593 0.98360 1.02808 0.97427 1.19788 0.98145 1.04993 1.01521 1.17317 0.80624 0.80031 0.83449 1.90763 1.79284 1.36652 1.35851 1.45704 1.20948 1.38870 1.31368 1.22483 0.85290 0.96629 0.93563 0.86531 1.23382 0.94192 0.96728 1.03362 1.22622 0.92366 0.98213 1.00691 0.88169 1.21876 0.82193 0.92247 1.01855 1.50593 1.12501 1.06820 1.47047 1.26123 0.82550 1.00597 0.95301 1.70565 1.33309 0.98449 1.25101 1.26072 0.88531 0.99611 0.96506 1.78100 1.20666 0.90108 1.25005 1.23506 0.94198 0.99608 1.00028 1.20431 0.91200 0.97845 0.90162 1.20528 0.99460 0.93597 0.95718 1.21740 0.95874 0.97919 1.01207 1.21983 0.99149 0.98993 0.97477 1.22343 0.82550 0.99048 0.97913 1.43873 1.17558 1.26911 1.21344 0.76441 0.90451 1.17936 1.17647 0.83861 0.76695 0.89168 0.90023 0.87733 0.89100 0.76584 0.76740 0.90456 0.89619 0.89314 0.88115 0.90157 0.91292 0.90652 0.89307 0.90097 0.86994 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.12 9.97 -35.23 -0.35 0.77 16 2 C -0.05 0.06 2.99 36.00 0.11 0.16 16 3 Si 0.71 -1.59 31.22 -169.99 -5.31 -6.90 16 4 C 0.04 0.09 6.18 -81.87 -0.51 -0.42 16 5 C -0.18 -0.47 9.09 -37.47 -0.34 -0.81 16 6 C -0.24 -1.01 6.28 -103.47 -0.65 -1.66 16 7 C 0.60 2.86 7.81 -12.59 -0.10 2.76 16 8 O -0.55 -4.18 14.93 5.26 0.08 -4.10 16 9 N -0.72 -1.11 5.36 -54.00 -0.29 -1.40 16 10 C 0.13 0.08 4.25 -66.98 -0.28 -0.20 16 11 H 0.12 0.30 7.46 -51.93 -0.39 -0.09 16 12 C -0.14 0.33 7.39 -25.92 -0.19 0.14 16 13 C -0.12 0.18 3.85 -89.81 -0.35 -0.16 16 14 H 0.10 -0.04 8.14 -51.93 -0.42 -0.46 16 15 C 0.14 -0.35 6.39 -4.04 -0.03 -0.37 16 16 N -0.38 -0.29 3.69 -62.63 -0.23 -0.52 16 17 C 0.25 0.12 12.63 -90.65 -1.14 -1.03 16 18 N -0.55 -1.88 11.19 -15.83 -0.18 -2.05 16 19 C 0.20 0.57 13.03 -91.81 -1.20 -0.63 16 20 N -0.31 -1.05 12.57 29.29 0.37 -0.68 16 21 C -0.13 -0.06 7.44 -25.78 -0.19 -0.26 16 22 C 0.12 0.47 6.57 -81.64 -0.54 -0.07 16 23 C -0.06 -0.13 5.33 -27.53 -0.15 -0.28 16 24 C -0.13 0.01 5.97 -26.45 -0.16 -0.15 16 25 C -0.14 0.11 5.94 -26.46 -0.16 -0.05 16 26 C 0.10 0.01 6.22 -3.57 -0.02 -0.01 16 27 N -0.42 -1.09 3.11 -107.23 -0.33 -1.43 16 28 H 0.39 -2.68 8.74 45.56 0.40 -2.28 16 29 H 0.08 -0.20 7.96 -51.93 -0.41 -0.61 16 30 H -0.25 0.09 6.88 56.52 0.39 0.48 16 31 H -0.25 -0.44 7.11 56.52 0.40 -0.04 16 32 H 0.14 0.10 6.37 -52.49 -0.33 -0.23 16 33 H 0.40 -0.22 7.85 -40.82 -0.32 -0.55 16 34 H 0.09 -0.35 8.08 -51.93 -0.42 -0.77 16 35 H 0.08 -0.21 8.14 -51.93 -0.42 -0.64 16 36 H 0.10 -0.56 8.09 -51.93 -0.42 -0.98 16 37 H 0.09 -0.25 7.84 -51.93 -0.41 -0.66 16 38 H 0.22 -0.87 8.06 -52.49 -0.42 -1.29 16 39 H 0.22 -0.02 8.06 -52.49 -0.42 -0.44 16 40 H 0.08 0.21 8.14 -51.93 -0.42 -0.21 16 41 H 0.09 0.04 7.90 -51.93 -0.41 -0.37 16 42 H 0.09 0.23 8.14 -51.93 -0.42 -0.20 16 43 H 0.10 0.36 7.39 -51.93 -0.38 -0.02 16 44 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 45 H 0.07 0.01 8.12 -51.93 -0.42 -0.41 16 46 H 0.07 -0.01 8.11 -51.93 -0.42 -0.43 16 47 H 0.09 -0.22 8.14 -51.93 -0.42 -0.64 16 48 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 49 H 0.11 -0.01 5.94 -51.93 -0.31 -0.31 16 LS Contribution 396.34 15.07 5.97 5.97 Total: 0.00 -12.09 396.34 -13.42 -25.52 By element: Atomic # 1 Polarization: -4.88 SS G_CDS: -7.26 Total: -12.15 kcal Atomic # 6 Polarization: 2.86 SS G_CDS: -5.89 Total: -3.03 kcal Atomic # 7 Polarization: -5.42 SS G_CDS: -0.66 Total: -6.09 kcal Atomic # 8 Polarization: -3.06 SS G_CDS: -0.27 Total: -3.33 kcal Atomic # 14 Polarization: -1.59 SS G_CDS: -5.31 Total: -6.90 kcal Total LS contribution 5.97 Total: 5.97 kcal Total: -12.09 -13.42 -25.52 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14644236_16915396.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 120.797 kcal (2) G-P(sol) polarization free energy of solvation -12.094 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 108.703 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.423 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.517 kcal (6) G-S(sol) free energy of system = (1) + (5) 95.280 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.28 seconds