Wall clock time and date at job start Sun Mar 7 2021 00:08:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42891 * 1 3 3 Si 1.86304 * 109.47117 * 2 1 4 4 C 1.50696 * 109.47300 * 119.99708 * 2 1 3 5 5 C 1.38708 * 120.02796 * 74.99985 * 4 2 1 6 6 O 1.35900 * 120.05751 * 359.96075 * 5 4 2 7 7 C 1.42894 * 117.00370 * 180.02562 * 6 5 4 8 8 C 1.50699 * 109.47583 * 179.97438 * 7 6 5 9 9 O 1.21283 * 119.99341 * 359.97438 * 8 7 6 10 10 N 1.34776 * 120.00405 * 180.02562 * 8 7 6 11 11 C 1.46499 * 119.99941 * 180.02562 * 10 8 7 12 12 H 1.08999 * 112.85296 * 25.33028 * 11 10 8 13 13 C 1.53780 * 113.61420 * 156.52454 * 11 10 8 14 14 C 1.53785 * 87.08121 * 139.97932 * 13 11 10 15 15 H 1.08994 * 113.61624 * 89.11610 * 14 13 11 16 16 C 1.53003 * 113.61239 * 220.02230 * 14 13 11 17 17 N 1.46505 * 109.46504 * 184.99920 * 16 14 13 18 18 C 1.34430 * 126.82053 * 125.00516 * 17 16 14 19 19 N 1.30831 * 108.07699 * 179.97438 * 18 17 16 20 20 C 1.33238 * 109.82761 * 359.97438 * 19 18 17 21 21 N 1.30717 * 108.95048 * 359.75611 * 20 19 18 22 22 C 1.53787 * 113.61293 * 254.13135 * 11 10 8 23 23 C 1.38759 * 119.89010 * 179.97438 * 5 4 2 24 24 C 1.38119 * 119.94381 * 0.02562 * 23 5 4 25 25 C 1.38295 * 120.05704 * 359.97438 * 24 23 5 26 26 C 1.38171 * 120.03158 * 254.95817 * 4 2 1 27 27 H 0.96696 * 114.00465 * 300.00120 * 1 2 3 28 28 H 1.09001 * 109.47469 * 240.00199 * 2 1 3 29 29 H 1.48501 * 110.00015 * 178.68410 * 3 2 1 30 30 H 1.48504 * 109.99607 * 299.99482 * 3 2 1 31 31 H 1.09001 * 109.47181 * 300.00095 * 7 6 5 32 32 H 1.08998 * 109.47333 * 59.99666 * 7 6 5 33 33 H 0.97002 * 119.99581 * 359.97438 * 10 8 7 34 34 H 1.08993 * 113.61445 * 254.52430 * 13 11 10 35 35 H 1.09006 * 113.61149 * 25.35055 * 13 11 10 36 36 H 1.08996 * 109.47213 * 304.99587 * 16 14 13 37 37 H 1.08998 * 109.47190 * 64.99924 * 16 14 13 38 38 H 1.07999 * 125.96172 * 359.91583 * 18 17 16 39 39 H 1.07999 * 125.52782 * 180.02562 * 20 19 18 40 40 H 1.09004 * 113.61074 * 334.57099 * 22 11 10 41 41 H 1.09000 * 113.61278 * 105.46666 * 22 11 10 42 42 H 1.08001 * 120.03003 * 179.97438 * 23 5 4 43 43 H 1.07997 * 119.97310 * 179.97438 * 24 23 5 44 44 H 1.07995 * 119.94657 * 179.74935 * 25 24 23 45 45 H 1.08005 * 119.97011 * 0.04236 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 1.8696 -2.0939 1.3070 6 8 1.3555 -2.8106 0.2731 7 6 1.3229 -4.2315 0.4215 8 6 0.7241 -4.8520 -0.8144 9 8 0.3607 -4.1468 -1.7317 10 7 0.5916 -6.1905 -0.8999 11 6 0.0101 -6.7938 -2.1016 12 1 0.1283 -6.1703 -2.9879 13 6 0.4261 -8.2582 -2.3188 14 6 -1.0231 -8.5221 -2.7606 15 1 -1.1888 -8.3715 -3.8272 16 6 -1.5865 -9.8507 -2.2521 17 7 -2.9197 -10.0651 -2.8203 18 6 -3.3351 -11.1358 -3.5190 19 7 -4.5869 -10.9451 -3.8482 20 6 -5.0035 -9.7696 -3.3791 21 7 -4.0197 -9.1958 -2.7376 22 6 -1.4240 -7.3108 -1.8990 23 6 2.3335 -2.7451 2.4411 24 6 2.8548 -2.0144 3.4909 25 6 2.9152 -0.6350 3.4122 26 6 2.4545 0.0160 2.2830 27 1 -0.3934 0.4417 0.7650 28 1 1.7923 -0.5138 -0.8900 29 1 3.5345 1.7703 0.0320 30 1 1.5614 2.4678 -1.2086 31 1 2.3371 -4.6056 0.5614 32 1 0.7166 -4.4924 1.2888 33 1 0.8820 -6.7545 -0.1660 34 1 1.1567 -8.3908 -3.1167 35 1 0.7045 -8.7739 -1.3997 36 1 -0.9275 -10.6644 -2.5547 37 1 -1.6550 -9.8239 -1.1646 38 1 -2.7392 -12.0019 -3.7663 39 1 -5.9947 -9.3595 -3.5045 40 1 -1.6536 -7.5674 -0.8648 41 1 -2.1847 -6.6796 -2.3584 42 1 2.2862 -3.8222 2.5033 43 1 3.2156 -2.5207 4.3740 44 1 3.3194 -0.0652 4.2357 45 1 2.5027 1.0933 2.2239 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14644236_2989392.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:08:34 Heat of formation + Delta-G solvation = 54.068851 kcal Electronic energy + Delta-G solvation = -28855.933923 eV Core-core repulsion = 24650.910128 eV Total energy + Delta-G solvation = -4205.023795 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.152 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -42.98903 -41.67903 -41.06693 -39.67109 -38.35972 -37.36710 -35.54208 -34.12527 -32.73764 -32.12398 -31.34901 -29.92318 -28.68602 -26.94459 -26.61507 -24.77149 -23.48503 -22.89308 -22.63759 -22.38402 -21.66609 -20.86362 -19.49195 -18.54883 -18.21095 -17.92318 -17.51770 -17.34505 -16.93485 -16.80932 -16.55827 -16.11747 -15.92962 -15.78815 -15.52978 -15.33694 -15.09610 -14.99674 -14.86009 -14.62324 -14.08718 -13.88658 -13.77814 -13.68194 -13.55986 -13.19682 -13.03218 -12.98934 -12.43875 -12.34912 -12.22935 -12.08074 -11.96799 -11.68025 -11.57574 -10.93440 -10.87905 -10.72755 -10.62662 -10.24482 -10.18341 -10.02180 -9.23834 -4.97061 0.18312 0.37281 0.68233 1.29079 1.38809 1.44127 1.46465 1.72172 2.06457 2.07599 2.52627 2.65269 3.05872 3.21139 3.35901 3.39818 3.48860 3.55743 3.58723 3.74255 3.76093 3.79220 3.84895 3.89173 3.92633 3.97827 3.99578 4.06209 4.22977 4.30979 4.37663 4.43223 4.48228 4.51400 4.56783 4.66470 4.75930 4.93751 4.98444 5.02156 5.22434 5.28521 5.30026 5.36763 5.44401 5.49590 5.65606 5.81443 6.20215 6.35229 6.77750 7.07539 7.15205 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.531 6.531 2 C -0.057 4.057 3 Si 0.682 3.318 4 C -0.149 4.149 5 C 0.151 3.849 6 O -0.278 6.278 7 C 0.039 3.961 8 C 0.516 3.484 9 O -0.506 6.506 10 N -0.719 5.719 11 C 0.124 3.876 12 H 0.117 0.883 13 C -0.136 4.136 14 C -0.119 4.119 15 H 0.101 0.899 16 C 0.141 3.859 17 N -0.380 5.380 18 C 0.252 3.748 19 N -0.547 5.547 20 C 0.197 3.803 21 N -0.312 5.312 22 C -0.135 4.135 23 C -0.212 4.212 24 C -0.073 4.073 25 C -0.151 4.151 26 C -0.075 4.075 27 H 0.373 0.627 28 H 0.113 0.887 29 H -0.257 1.257 30 H -0.254 1.254 31 H 0.093 0.907 32 H 0.094 0.906 33 H 0.402 0.598 34 H 0.083 0.917 35 H 0.092 0.908 36 H 0.105 0.895 37 H 0.091 0.909 38 H 0.218 0.782 39 H 0.217 0.783 40 H 0.087 0.913 41 H 0.079 0.921 42 H 0.129 0.871 43 H 0.129 0.871 44 H 0.130 0.870 45 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.656 -3.962 6.656 9.037 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.168 4.168 3 Si 0.584 3.416 4 C -0.150 4.150 5 C 0.105 3.895 6 O -0.190 6.190 7 C -0.040 4.040 8 C 0.300 3.700 9 O -0.379 6.379 10 N -0.372 5.372 11 C 0.020 3.980 12 H 0.135 0.865 13 C -0.175 4.175 14 C -0.139 4.139 15 H 0.119 0.881 16 C 0.019 3.981 17 N -0.171 5.171 18 C -0.045 4.045 19 N -0.273 5.273 20 C -0.106 4.106 21 N -0.139 5.139 22 C -0.174 4.174 23 C -0.231 4.231 24 C -0.091 4.091 25 C -0.170 4.170 26 C -0.092 4.092 27 H 0.219 0.781 28 H 0.131 0.869 29 H -0.182 1.182 30 H -0.179 1.179 31 H 0.111 0.889 32 H 0.112 0.888 33 H 0.237 0.763 34 H 0.102 0.898 35 H 0.111 0.889 36 H 0.123 0.877 37 H 0.109 0.891 38 H 0.234 0.766 39 H 0.233 0.767 40 H 0.106 0.894 41 H 0.097 0.903 42 H 0.147 0.853 43 H 0.147 0.853 44 H 0.148 0.852 45 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges 4.708 -2.577 4.992 7.330 hybrid contribution 0.538 -1.429 0.437 1.588 sum 5.246 -4.006 5.429 8.546 Atomic orbital electron populations 1.86605 1.16919 1.81482 1.48575 1.24936 0.85401 1.09257 0.97201 0.95239 0.81003 0.77869 0.87498 1.19741 1.05614 0.91083 0.98580 1.18806 0.93109 0.90861 0.86749 1.86240 1.77370 1.16816 1.38542 1.22476 1.02407 0.81476 0.97646 1.20068 0.79011 0.82611 0.88271 1.90809 1.47100 1.60959 1.39046 1.45781 1.64761 1.06223 1.20451 1.22531 0.93527 0.92963 0.88986 0.86487 1.23374 0.96091 0.95333 1.02665 1.22656 0.96026 0.93950 1.01275 0.88080 1.21854 0.78076 0.98994 0.99191 1.50587 1.10916 1.14507 1.41102 1.26132 0.92569 0.93262 0.92543 1.70565 1.10313 1.19124 1.27343 1.26084 0.99832 0.90035 0.94638 1.78101 0.94538 1.16452 1.24855 1.23499 0.97078 0.96385 1.00419 1.21292 1.06494 1.00422 0.94899 1.21022 0.96315 0.94109 0.97665 1.21080 1.02704 0.94579 0.98588 1.20866 0.96686 0.99127 0.92540 0.78058 0.86924 1.18195 1.17873 0.88935 0.88800 0.76347 0.89839 0.88911 0.87674 0.89086 0.76557 0.76700 0.89427 0.90262 0.85315 0.85340 0.85164 0.84673 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.78 12.88 -35.23 -0.45 -2.24 16 2 C -0.06 -0.15 2.38 36.00 0.09 -0.06 16 3 Si 0.68 0.32 29.92 -169.99 -5.09 -4.77 16 4 C -0.15 -0.27 5.27 -104.47 -0.55 -0.82 16 5 C 0.15 0.34 6.66 -39.22 -0.26 0.08 16 6 O -0.28 -1.02 9.00 -39.34 -0.35 -1.37 16 7 C 0.04 -0.02 5.22 36.01 0.19 0.17 16 8 C 0.52 0.90 7.91 -10.99 -0.09 0.81 16 9 O -0.51 -3.64 16.12 -14.36 -0.23 -3.87 16 10 N -0.72 1.43 5.36 -53.02 -0.28 1.15 16 11 C 0.12 -0.18 4.21 -67.12 -0.28 -0.46 16 12 H 0.12 0.12 7.50 -51.93 -0.39 -0.27 16 13 C -0.14 0.60 7.39 -25.92 -0.19 0.41 16 14 C -0.12 0.35 3.86 -89.71 -0.35 0.01 16 15 H 0.10 -0.15 8.14 -51.93 -0.42 -0.57 16 16 C 0.14 -0.52 6.39 -4.04 -0.03 -0.55 16 17 N -0.38 0.04 3.69 -62.63 -0.23 -0.19 16 18 C 0.25 -0.06 12.63 -90.65 -1.14 -1.20 16 19 N -0.55 -1.57 11.19 -15.83 -0.18 -1.74 16 20 C 0.20 0.46 13.03 -91.81 -1.20 -0.74 16 21 N -0.31 -0.83 12.58 29.29 0.37 -0.46 16 22 C -0.14 0.15 7.45 -25.82 -0.19 -0.04 16 23 C -0.21 0.03 9.04 -39.43 -0.36 -0.33 16 24 C -0.07 0.07 10.04 -39.60 -0.40 -0.33 16 25 C -0.15 0.14 10.04 -39.56 -0.40 -0.26 16 26 C -0.07 0.02 8.66 -39.61 -0.34 -0.32 16 27 H 0.37 -0.46 8.70 45.56 0.40 -0.06 16 28 H 0.11 0.52 7.83 -51.93 -0.41 0.11 16 29 H -0.26 -0.67 7.11 56.52 0.40 -0.27 16 30 H -0.25 -0.98 7.11 56.52 0.40 -0.58 16 31 H 0.09 -0.30 7.66 -51.93 -0.40 -0.70 16 32 H 0.09 -0.27 7.66 -51.93 -0.40 -0.67 16 33 H 0.40 -2.20 8.71 -40.82 -0.36 -2.56 16 34 H 0.08 -0.37 8.14 -51.93 -0.42 -0.79 16 35 H 0.09 -0.58 8.07 -51.93 -0.42 -1.00 16 36 H 0.11 -0.69 8.09 -51.93 -0.42 -1.11 16 37 H 0.09 -0.38 7.85 -51.93 -0.41 -0.79 16 38 H 0.22 -1.02 8.06 -52.49 -0.42 -1.45 16 39 H 0.22 -0.12 8.06 -52.49 -0.42 -0.54 16 40 H 0.09 -0.14 7.90 -51.93 -0.41 -0.55 16 41 H 0.08 0.13 8.14 -51.93 -0.42 -0.30 16 42 H 0.13 -0.35 6.30 -52.49 -0.33 -0.68 16 43 H 0.13 -0.39 8.06 -52.49 -0.42 -0.81 16 44 H 0.13 -0.39 8.06 -52.49 -0.42 -0.81 16 45 H 0.14 -0.37 5.13 -52.48 -0.27 -0.64 16 LS Contribution 383.17 15.07 5.77 5.77 Total: 0.00 -14.26 383.17 -12.14 -26.40 By element: Atomic # 1 Polarization: -9.08 SS G_CDS: -5.97 Total: -15.04 kcal Atomic # 6 Polarization: 1.86 SS G_CDS: -5.50 Total: -3.64 kcal Atomic # 7 Polarization: -0.92 SS G_CDS: -0.32 Total: -1.24 kcal Atomic # 8 Polarization: -6.45 SS G_CDS: -1.04 Total: -7.49 kcal Atomic # 14 Polarization: 0.32 SS G_CDS: -5.09 Total: -4.77 kcal Total LS contribution 5.77 Total: 5.77 kcal Total: -14.26 -12.14 -26.40 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14644236_2989392.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 80.471 kcal (2) G-P(sol) polarization free energy of solvation -14.264 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 66.208 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.139 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.402 kcal (6) G-S(sol) free energy of system = (1) + (5) 54.069 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds