Wall clock time and date at job start Sun Mar 7 2021 00:08:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86304 * 109.46808 * 2 1 4 4 C 1.50694 * 109.47458 * 240.00429 * 2 1 3 5 5 C 1.38268 * 119.94062 * 299.99736 * 4 2 1 6 6 C 1.38151 * 120.05722 * 179.97438 * 5 4 2 7 7 C 1.38734 * 119.94011 * 359.97438 * 6 5 4 8 8 O 1.35902 * 120.05483 * 180.02562 * 7 6 5 9 9 C 1.42895 * 117.00017 * 179.97438 * 8 7 6 10 10 C 1.50701 * 109.46838 * 179.97438 * 9 8 7 11 11 O 1.21280 * 120.00269 * 0.02562 * 10 9 8 12 12 N 1.34781 * 119.99932 * 179.97438 * 10 9 8 13 13 C 1.46500 * 119.99985 * 179.97438 * 12 10 9 14 14 H 1.09002 * 112.85221 * 334.67013 * 13 12 10 15 15 C 1.53785 * 113.68813 * 105.94035 * 13 12 10 16 16 C 1.53779 * 87.08093 * 139.99098 * 15 13 12 17 17 H 1.09003 * 113.61186 * 89.11185 * 16 15 13 18 18 C 1.52999 * 113.61451 * 220.01770 * 16 15 13 19 19 N 1.46504 * 109.47047 * 272.49902 * 18 16 15 20 20 C 1.34431 * 126.82305 * 124.99674 * 19 18 16 21 21 N 1.30828 * 108.07547 * 179.97438 * 20 19 18 22 22 C 1.33243 * 109.83112 * 0.02562 * 21 20 19 23 23 N 1.30718 * 108.94594 * 359.74983 * 22 21 20 24 24 C 1.53781 * 113.61339 * 203.47543 * 13 12 10 25 25 C 1.38729 * 119.88922 * 0.27311 * 7 6 5 26 26 C 1.38146 * 119.94570 * 359.47440 * 25 7 6 27 27 H 0.96696 * 114.00393 * 60.00055 * 1 2 3 28 28 H 1.09000 * 109.47467 * 119.99960 * 2 1 3 29 29 H 1.48495 * 110.00029 * 298.68072 * 3 2 1 30 30 H 1.48503 * 110.00070 * 60.00142 * 3 2 1 31 31 H 1.08001 * 119.97673 * 359.97422 * 5 4 2 32 32 H 1.07995 * 120.02687 * 180.02562 * 6 5 4 33 33 H 1.08997 * 109.47351 * 60.00259 * 9 8 7 34 34 H 1.08994 * 109.47217 * 299.99197 * 9 8 7 35 35 H 0.96998 * 119.99866 * 0.02562 * 12 10 9 36 36 H 1.09003 * 113.60734 * 254.54218 * 15 13 12 37 37 H 1.08996 * 113.61146 * 25.43716 * 15 13 12 38 38 H 1.09003 * 109.47100 * 32.49589 * 18 16 15 39 39 H 1.08995 * 109.47213 * 152.50009 * 18 16 15 40 40 H 1.08001 * 125.96200 * 0.02562 * 20 19 18 41 41 H 1.08001 * 125.52857 * 179.97438 * 22 21 20 42 42 H 1.09005 * 113.61302 * 334.48230 * 24 13 12 43 43 H 1.08996 * 113.61527 * 105.30394 * 24 13 12 44 44 H 1.08001 * 120.02500 * 179.72364 * 25 7 6 45 45 H 1.08000 * 119.97299 * 180.27297 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7103 -1.2304 5 6 1.5967 -2.0341 -1.4481 6 6 2.0555 -2.6874 -2.5756 7 6 2.8523 -2.0139 -3.4901 8 8 3.3045 -2.6542 -4.6002 9 6 4.1196 -1.8984 -5.4982 10 6 4.5242 -2.7672 -6.6613 11 8 4.1510 -3.9198 -6.7160 12 7 5.3001 -2.2629 -7.6412 13 6 5.6940 -3.1076 -8.7715 14 1 5.6965 -4.1695 -8.5257 15 6 4.9503 -2.7791 -10.0769 16 6 6.2885 -2.9983 -10.8022 17 1 6.4535 -4.0304 -11.1115 18 6 6.5498 -1.9913 -11.9240 19 7 5.9555 -2.4828 -13.1696 20 6 5.0757 -1.8353 -13.9531 21 7 4.7897 -2.6094 -14.9683 22 6 5.4639 -3.7542 -14.8677 23 7 6.1957 -3.7222 -13.7851 24 6 6.9769 -2.6353 -9.4758 25 6 3.1909 -0.6872 -3.2667 26 6 2.7252 -0.0369 -2.1404 27 1 -0.3934 0.4417 -0.7650 28 1 1.7924 -0.5138 0.8900 29 1 1.5878 2.4586 -1.2242 30 1 1.5614 2.4679 1.2085 31 1 0.9760 -2.5578 -0.7362 32 1 1.7935 -3.7212 -2.7453 33 1 5.0115 -1.5527 -4.9759 34 1 3.5570 -1.0397 -5.8643 35 1 5.5984 -1.3409 -7.5976 36 1 4.1861 -3.5105 -10.3399 37 1 4.5895 -1.7518 -10.1272 38 1 6.1034 -1.0319 -11.6623 39 1 7.6243 -1.8676 -12.0582 40 1 4.6756 -0.8479 -13.7759 41 1 5.4165 -4.5741 -15.5691 42 1 7.1702 -1.5686 -9.3618 43 1 7.8490 -3.2497 -9.2524 44 1 3.8147 -0.1621 -3.9749 45 1 2.9849 0.9972 -1.9683 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14644236_2989410.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:08:38 Heat of formation + Delta-G solvation = 52.629141 kcal Electronic energy + Delta-G solvation = -28140.922179 eV Core-core repulsion = 23935.835954 eV Total energy + Delta-G solvation = -4205.086225 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.152 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -43.01669 -41.70519 -41.09710 -39.83104 -38.89475 -37.24458 -35.59880 -34.18578 -32.45336 -32.14967 -31.80389 -30.16082 -28.81433 -27.04019 -26.31060 -24.80421 -23.91244 -22.99353 -22.68273 -22.25952 -21.78325 -20.77071 -19.58987 -18.69034 -18.38474 -18.17633 -17.56367 -17.50339 -16.94080 -16.72155 -16.46700 -16.38461 -16.16906 -15.83118 -15.61930 -15.61271 -15.17619 -15.03864 -14.71867 -14.60020 -14.35164 -13.94010 -13.81173 -13.76311 -13.65429 -13.47830 -13.31211 -12.84514 -12.57063 -12.28947 -12.20992 -12.15814 -12.10903 -11.75733 -11.67012 -11.00730 -10.93104 -10.74785 -10.62390 -10.61339 -10.27860 -10.08881 -9.27516 -5.01230 0.23757 0.25089 0.65781 1.25282 1.25718 1.35837 1.36942 1.54433 1.92854 2.04234 2.44887 2.60612 3.08866 3.17768 3.23651 3.33759 3.36269 3.37933 3.49476 3.62310 3.67014 3.68290 3.80509 3.80911 3.81605 3.87405 3.96873 4.14745 4.21694 4.27558 4.32422 4.38999 4.47601 4.49848 4.56765 4.61648 4.69112 4.77341 4.90404 4.97827 5.09872 5.19734 5.26250 5.28362 5.45561 5.46924 5.62952 5.79417 6.13311 6.28030 6.38546 6.97743 7.12659 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.070 4.070 3 Si 0.682 3.318 4 C -0.155 4.155 5 C -0.051 4.051 6 C -0.145 4.145 7 C 0.134 3.866 8 O -0.288 6.288 9 C 0.040 3.960 10 C 0.516 3.484 11 O -0.510 6.510 12 N -0.718 5.718 13 C 0.128 3.872 14 H 0.119 0.881 15 C -0.148 4.148 16 C -0.121 4.121 17 H 0.111 0.889 18 C 0.141 3.859 19 N -0.378 5.378 20 C 0.253 3.747 21 N -0.547 5.547 22 C 0.199 3.801 23 N -0.317 5.317 24 C -0.135 4.135 25 C -0.206 4.206 26 C -0.075 4.075 27 H 0.376 0.624 28 H 0.118 0.882 29 H -0.261 1.261 30 H -0.257 1.257 31 H 0.135 0.865 32 H 0.136 0.864 33 H 0.096 0.904 34 H 0.095 0.905 35 H 0.403 0.597 36 H 0.075 0.925 37 H 0.088 0.912 38 H 0.103 0.897 39 H 0.093 0.907 40 H 0.217 0.783 41 H 0.217 0.783 42 H 0.092 0.908 43 H 0.085 0.915 44 H 0.131 0.869 45 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.148 6.752 0.587 8.511 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.180 4.180 3 Si 0.583 3.417 4 C -0.156 4.156 5 C -0.069 4.069 6 C -0.164 4.164 7 C 0.088 3.912 8 O -0.200 6.200 9 C -0.039 4.039 10 C 0.301 3.699 11 O -0.383 6.383 12 N -0.372 5.372 13 C 0.023 3.977 14 H 0.137 0.863 15 C -0.187 4.187 16 C -0.141 4.141 17 H 0.129 0.871 18 C 0.019 3.981 19 N -0.169 5.169 20 C -0.044 4.044 21 N -0.273 5.273 22 C -0.103 4.103 23 N -0.145 5.145 24 C -0.174 4.174 25 C -0.225 4.225 26 C -0.093 4.093 27 H 0.223 0.777 28 H 0.136 0.864 29 H -0.186 1.186 30 H -0.182 1.182 31 H 0.153 0.847 32 H 0.154 0.846 33 H 0.114 0.886 34 H 0.113 0.887 35 H 0.238 0.762 36 H 0.094 0.906 37 H 0.106 0.894 38 H 0.121 0.879 39 H 0.111 0.889 40 H 0.234 0.766 41 H 0.234 0.766 42 H 0.111 0.889 43 H 0.103 0.897 44 H 0.149 0.851 45 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 4.991 5.745 1.093 7.688 hybrid contribution -0.846 0.768 -0.530 1.259 sum 4.145 6.513 0.564 7.741 Atomic orbital electron populations 1.86600 1.17812 1.79909 1.49333 1.24960 0.83875 1.10767 0.98417 0.95138 0.91672 0.74622 0.80222 1.20206 1.01863 0.95490 0.98015 1.20870 0.96749 0.93424 0.95839 1.20545 1.00395 1.01300 0.94134 1.19080 0.94308 0.91090 0.86686 1.86178 1.64359 1.38585 1.30928 1.22478 0.96485 0.94501 0.90447 1.20100 0.78732 0.88099 0.82970 1.90798 1.52708 1.17641 1.77149 1.45790 1.52801 1.15712 1.22863 1.22480 0.94697 0.96945 0.83578 0.86309 1.23596 0.97019 1.02807 0.95269 1.22705 0.97442 1.01135 0.92774 0.87086 1.21856 0.99798 0.96952 0.79454 1.50555 1.33687 1.12616 1.20071 1.26095 0.90919 0.99742 0.87643 1.70565 1.28073 1.04316 1.24392 1.26068 0.92362 0.96723 0.95186 1.78043 1.24978 1.00177 1.11313 1.23371 0.97568 1.02588 0.93879 1.21159 1.06259 0.94189 1.00904 1.20784 0.96108 0.99214 0.93159 0.77671 0.86412 1.18612 1.18224 0.84725 0.84622 0.88579 0.88744 0.76237 0.90624 0.89365 0.87906 0.88861 0.76634 0.76637 0.88911 0.89670 0.85072 0.85243 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.54 12.77 -35.23 -0.45 -0.99 16 2 C -0.07 0.04 2.82 36.00 0.10 0.14 16 3 Si 0.68 -1.01 29.78 -169.99 -5.06 -6.07 16 4 C -0.16 0.03 5.39 -104.60 -0.56 -0.53 16 5 C -0.05 -0.03 9.60 -39.60 -0.38 -0.41 16 6 C -0.15 -0.19 9.99 -39.43 -0.39 -0.58 16 7 C 0.13 0.15 6.69 -39.22 -0.26 -0.11 16 8 O -0.29 -0.61 9.67 -39.34 -0.38 -0.99 16 9 C 0.04 -0.08 5.22 36.01 0.19 0.11 16 10 C 0.52 0.13 7.91 -10.98 -0.09 0.04 16 11 O -0.51 -2.88 16.12 -14.35 -0.23 -3.11 16 12 N -0.72 2.42 5.36 -53.01 -0.28 2.13 16 13 C 0.13 -0.33 4.22 -67.12 -0.28 -0.61 16 14 H 0.12 0.00 7.50 -51.93 -0.39 -0.39 16 15 C -0.15 0.42 7.43 -25.92 -0.19 0.23 16 16 C -0.12 0.41 3.88 -89.81 -0.35 0.07 16 17 H 0.11 -0.12 8.01 -51.93 -0.42 -0.53 16 18 C 0.14 -0.57 6.39 -4.04 -0.03 -0.60 16 19 N -0.38 0.16 3.69 -62.63 -0.23 -0.07 16 20 C 0.25 -0.12 12.63 -90.65 -1.14 -1.26 16 21 N -0.55 -1.44 11.19 -15.83 -0.18 -1.61 16 22 C 0.20 0.40 13.03 -91.81 -1.20 -0.79 16 23 N -0.32 -0.76 12.46 29.29 0.36 -0.39 16 24 C -0.14 0.67 7.39 -25.92 -0.19 0.48 16 25 C -0.21 0.22 9.04 -39.43 -0.36 -0.14 16 26 C -0.08 0.08 8.66 -39.61 -0.34 -0.26 16 27 H 0.38 -0.65 8.70 45.56 0.40 -0.26 16 28 H 0.12 -0.14 7.96 -51.93 -0.41 -0.56 16 29 H -0.26 -0.09 7.11 56.52 0.40 0.31 16 30 H -0.26 -0.52 7.11 56.52 0.40 -0.12 16 31 H 0.13 -0.03 8.06 -52.49 -0.42 -0.45 16 32 H 0.14 0.13 8.06 -52.49 -0.42 -0.29 16 33 H 0.10 -0.45 7.65 -51.93 -0.40 -0.85 16 34 H 0.09 -0.43 7.67 -51.93 -0.40 -0.83 16 35 H 0.40 -2.79 8.71 -40.82 -0.36 -3.14 16 36 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 37 H 0.09 -0.38 7.90 -51.93 -0.41 -0.79 16 38 H 0.10 -0.72 7.79 -51.93 -0.40 -1.12 16 39 H 0.09 -0.41 8.14 -51.93 -0.42 -0.84 16 40 H 0.22 -1.06 8.06 -52.49 -0.42 -1.49 16 41 H 0.22 -0.21 8.06 -52.49 -0.42 -0.63 16 42 H 0.09 -0.65 8.07 -51.93 -0.42 -1.07 16 43 H 0.08 -0.38 8.14 -51.93 -0.42 -0.81 16 44 H 0.13 -0.52 6.30 -52.49 -0.33 -0.85 16 45 H 0.13 -0.40 4.87 -52.49 -0.26 -0.66 16 LS Contribution 383.33 15.07 5.78 5.78 Total: 0.00 -13.27 383.33 -12.11 -25.38 By element: Atomic # 1 Polarization: -9.86 SS G_CDS: -5.95 Total: -15.81 kcal Atomic # 6 Polarization: 1.24 SS G_CDS: -5.48 Total: -4.24 kcal Atomic # 7 Polarization: 0.38 SS G_CDS: -0.33 Total: 0.05 kcal Atomic # 8 Polarization: -4.03 SS G_CDS: -1.06 Total: -5.09 kcal Atomic # 14 Polarization: -1.01 SS G_CDS: -5.06 Total: -6.07 kcal Total LS contribution 5.78 Total: 5.78 kcal Total: -13.27 -12.11 -25.38 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14644236_2989410.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 78.008 kcal (2) G-P(sol) polarization free energy of solvation -13.273 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 64.735 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.106 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.379 kcal (6) G-S(sol) free energy of system = (1) + (5) 52.629 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.11 seconds