Wall clock time and date at job start Sun Mar 7 2021 00:08:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86295 * 109.47183 * 2 1 4 4 C 1.50700 * 109.47044 * 240.00366 * 2 1 3 5 5 C 1.38267 * 119.94496 * 299.99773 * 4 2 1 6 6 C 1.38145 * 120.05730 * 179.97438 * 5 4 2 7 7 C 1.38729 * 119.94319 * 0.02562 * 6 5 4 8 8 O 1.35901 * 120.05330 * 179.97438 * 7 6 5 9 9 C 1.42904 * 116.99747 * 179.97438 * 8 7 6 10 10 C 1.53000 * 109.46992 * 180.02562 * 9 8 7 11 11 C 1.50706 * 109.47137 * 180.02562 * 10 9 8 12 12 O 1.21281 * 119.99922 * 359.97438 * 11 10 9 13 13 N 1.34779 * 119.99749 * 179.97438 * 11 10 9 14 14 C 1.46494 * 119.99525 * 179.97438 * 13 11 10 15 15 H 1.09000 * 112.91148 * 23.75262 * 14 13 11 16 16 C 1.53786 * 113.61370 * 155.00031 * 14 13 11 17 17 C 1.53781 * 87.17350 * 140.02367 * 16 14 13 18 18 H 1.09003 * 113.61462 * 89.16045 * 17 16 14 19 19 C 1.52991 * 113.61529 * 219.97788 * 17 16 14 20 20 N 1.46508 * 109.47429 * 184.99923 * 19 17 16 21 21 C 1.34426 * 126.81984 * 124.70705 * 20 19 17 22 22 N 1.30840 * 108.07312 * 179.89701 * 21 20 19 23 23 C 1.33244 * 109.82711 * 0.38357 * 22 21 20 24 24 N 1.30709 * 108.94622 * 359.76066 * 23 22 21 25 25 C 1.53781 * 87.08070 * 334.52830 * 17 16 14 26 26 C 1.38728 * 119.89025 * 0.27174 * 7 6 5 27 27 C 1.38149 * 119.94194 * 359.47309 * 26 7 6 28 28 H 0.96703 * 113.99669 * 299.98927 * 1 2 3 29 29 H 1.08999 * 109.47345 * 120.00141 * 2 1 3 30 30 H 1.48500 * 110.00383 * 178.68401 * 3 2 1 31 31 H 1.48504 * 110.00250 * 300.00506 * 3 2 1 32 32 H 1.08004 * 119.96909 * 0.02562 * 5 4 2 33 33 H 1.08002 * 120.02567 * 179.97438 * 6 5 4 34 34 H 1.08999 * 109.47316 * 60.00363 * 9 8 7 35 35 H 1.09000 * 109.46899 * 299.99898 * 9 8 7 36 36 H 1.09001 * 109.47498 * 60.00193 * 10 9 8 37 37 H 1.09005 * 109.47129 * 299.99946 * 10 9 8 38 38 H 0.97000 * 119.99938 * 359.97438 * 13 11 10 39 39 H 1.09002 * 113.61357 * 25.43283 * 16 14 13 40 40 H 1.09002 * 113.61608 * 254.61445 * 16 14 13 41 41 H 1.08997 * 109.47550 * 304.99814 * 19 17 16 42 42 H 1.09002 * 109.47334 * 65.00084 * 19 17 16 43 43 H 1.07996 * 125.96554 * 0.04585 * 21 20 19 44 44 H 1.07996 * 125.52605 * 179.73024 * 23 22 21 45 45 H 1.09005 * 113.61471 * 139.98321 * 25 17 16 46 46 H 1.08996 * 113.61178 * 270.79663 * 25 17 16 47 47 H 1.08003 * 120.02865 * 179.72587 * 26 7 6 48 48 H 1.07997 * 119.96926 * 180.23528 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 1.5966 -2.0341 -1.4482 6 6 2.0554 -2.6873 -2.5757 7 6 2.8530 -2.0142 -3.4896 8 8 3.3059 -2.6548 -4.5993 9 6 4.1219 -1.8993 -5.4969 10 6 4.5325 -2.7812 -6.6778 11 6 5.3936 -1.9847 -7.6240 12 8 5.6528 -0.8257 -7.3783 13 7 5.8755 -2.5604 -8.7433 14 6 6.7120 -1.7860 -9.6634 15 1 7.2081 -0.9445 -9.1797 16 6 7.6564 -2.6516 -10.5142 17 6 7.3316 -1.7153 -11.6901 18 1 7.9977 -0.8553 -11.7604 19 6 7.1596 -2.4440 -13.0243 20 7 6.9728 -1.4629 -14.0962 21 6 7.6996 -1.3509 -15.2215 22 7 7.2161 -0.3556 -15.9196 23 6 6.1903 0.1948 -15.2714 24 7 6.0028 -0.4487 -14.1493 25 6 6.0028 -1.4111 -10.9785 26 6 3.1925 -0.6879 -3.2658 27 6 2.7268 -0.0375 -2.1394 28 1 -0.3933 0.4416 0.7652 29 1 1.7924 -0.5138 0.8899 30 1 3.5346 1.7703 0.0320 31 1 1.5614 2.4679 -1.2084 32 1 0.9753 -2.5576 -0.7366 33 1 1.7940 -3.7215 -2.7451 34 1 5.0135 -1.5536 -4.9738 35 1 3.5597 -1.0405 -5.8634 36 1 3.6407 -3.1266 -7.2008 37 1 5.0945 -3.6404 -6.3115 38 1 5.6684 -3.4875 -8.9396 39 1 7.3022 -3.6723 -10.6581 40 1 8.6974 -2.6059 -10.1944 41 1 8.0481 -3.0413 -13.2293 42 1 6.2876 -3.0960 -12.9725 43 1 8.5351 -1.9752 -15.5017 44 1 5.6085 1.0365 -15.6169 45 1 5.7084 -0.3629 -11.0326 46 1 5.1961 -2.0918 -11.2505 47 1 3.8169 -0.1630 -3.9736 48 1 2.9877 0.9961 -1.9667 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14644236_4549602.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:08:42 Heat of formation + Delta-G solvation = 44.398480 kcal Electronic energy + Delta-G solvation = -29791.868360 eV Core-core repulsion = 25430.887607 eV Total energy + Delta-G solvation = -4360.980752 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.168 amu Computer time = 1.25 seconds Orbital eigenvalues (eV) -43.00752 -41.50900 -41.11710 -39.78544 -38.98655 -37.21487 -35.57494 -34.20194 -33.29840 -32.14288 -32.02384 -31.49822 -29.22086 -26.95716 -26.69537 -25.75385 -24.42638 -23.42112 -22.91132 -22.40285 -21.97562 -21.63554 -20.82110 -19.50139 -18.48325 -18.37519 -17.98258 -17.52247 -17.49334 -17.09559 -16.86679 -16.64539 -16.22248 -16.07195 -15.80262 -15.68754 -15.47113 -15.19737 -14.88461 -14.77453 -14.66653 -14.39075 -14.09882 -13.87085 -13.80174 -13.68436 -13.61588 -13.28846 -13.02184 -12.95817 -12.81581 -12.40355 -12.34427 -12.10726 -11.91899 -11.84550 -11.71942 -11.60207 -11.03561 -10.93828 -10.74699 -10.64657 -10.29941 -10.19650 -9.99918 -9.14346 -4.95882 0.31388 0.35627 0.66443 1.28002 1.31234 1.44562 1.64667 1.65551 2.00015 2.04592 2.41234 2.67539 3.04518 3.20467 3.37584 3.39082 3.41792 3.47120 3.53583 3.73344 3.76249 3.79655 3.80347 3.86030 3.92179 3.96055 4.01226 4.05392 4.23560 4.27512 4.35962 4.36590 4.42059 4.44076 4.49799 4.54168 4.55505 4.61290 4.73833 4.75252 4.94273 4.96494 5.01278 5.21494 5.28248 5.30513 5.35804 5.47727 5.53373 5.73264 5.79675 6.26702 6.36293 6.64775 7.02648 7.13380 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.065 4.065 3 Si 0.680 3.320 4 C -0.114 4.114 5 C -0.050 4.050 6 C -0.149 4.149 7 C 0.137 3.863 8 O -0.315 6.315 9 C 0.073 3.927 10 C -0.142 4.142 11 C 0.521 3.479 12 O -0.537 6.537 13 N -0.718 5.718 14 C 0.121 3.879 15 H 0.117 0.883 16 C -0.137 4.137 17 C -0.119 4.119 18 H 0.101 0.899 19 C 0.141 3.859 20 N -0.380 5.380 21 C 0.252 3.748 22 N -0.547 5.547 23 C 0.197 3.803 24 N -0.313 5.313 25 C -0.135 4.135 26 C -0.201 4.201 27 C -0.083 4.083 28 H 0.382 0.618 29 H 0.074 0.926 30 H -0.256 1.256 31 H -0.251 1.251 32 H 0.136 0.864 33 H 0.136 0.864 34 H 0.073 0.927 35 H 0.073 0.927 36 H 0.108 0.892 37 H 0.108 0.892 38 H 0.404 0.596 39 H 0.092 0.908 40 H 0.082 0.918 41 H 0.105 0.895 42 H 0.091 0.909 43 H 0.218 0.782 44 H 0.217 0.783 45 H 0.077 0.923 46 H 0.087 0.913 47 H 0.134 0.866 48 H 0.120 0.880 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.879 -4.939 2.187 5.719 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.176 4.176 3 Si 0.582 3.418 4 C -0.114 4.114 5 C -0.068 4.068 6 C -0.167 4.167 7 C 0.092 3.908 8 O -0.229 6.229 9 C -0.003 4.003 10 C -0.181 4.181 11 C 0.308 3.692 12 O -0.413 6.413 13 N -0.369 5.369 14 C 0.016 3.984 15 H 0.135 0.865 16 C -0.175 4.175 17 C -0.139 4.139 18 H 0.119 0.881 19 C 0.018 3.982 20 N -0.171 5.171 21 C -0.045 4.045 22 N -0.274 5.274 23 C -0.106 4.106 24 N -0.140 5.140 25 C -0.174 4.174 26 C -0.219 4.219 27 C -0.100 4.100 28 H 0.229 0.771 29 H 0.092 0.908 30 H -0.181 1.181 31 H -0.176 1.176 32 H 0.153 0.847 33 H 0.154 0.846 34 H 0.091 0.909 35 H 0.091 0.909 36 H 0.126 0.874 37 H 0.126 0.874 38 H 0.238 0.762 39 H 0.111 0.889 40 H 0.101 0.899 41 H 0.123 0.877 42 H 0.109 0.891 43 H 0.235 0.765 44 H 0.233 0.767 45 H 0.096 0.904 46 H 0.106 0.894 47 H 0.152 0.848 48 H 0.137 0.863 Dipole moment (debyes) X Y Z Total from point charges 2.185 -3.785 1.579 4.647 hybrid contribution 0.289 -0.976 -0.444 1.111 sum 2.474 -4.762 1.135 5.485 Atomic orbital electron populations 1.86494 1.17340 1.81778 1.49653 1.24591 0.85581 1.10063 0.97376 0.95449 0.80647 0.78268 0.87481 1.19257 1.00807 0.94849 0.96488 1.20815 0.96535 0.93346 0.96069 1.20510 1.00778 1.01110 0.94313 1.18949 0.94187 0.90896 0.86793 1.85972 1.65117 1.40327 1.31456 1.22430 0.94729 0.93906 0.89200 1.21477 1.01385 0.99883 0.95398 1.20341 0.79882 0.87463 0.81528 1.90759 1.58665 1.17226 1.74676 1.45909 1.52421 1.15737 1.22871 1.22575 0.91953 0.95618 0.88235 0.86476 1.23378 1.00798 0.98792 0.94571 1.22623 0.99701 0.99585 0.92008 0.88123 1.21863 1.03611 0.88380 0.84305 1.50585 1.23858 1.25258 1.17371 1.26138 0.97558 0.96504 0.84283 1.70572 1.13335 1.10981 1.32469 1.26080 0.95176 1.00091 0.89233 1.78088 1.11604 1.02374 1.21963 1.23503 0.96281 1.03409 0.94170 1.21207 1.05757 0.94582 1.00376 1.20659 0.97231 0.98551 0.93598 0.77087 0.90835 1.18073 1.17599 0.84661 0.84616 0.90913 0.90908 0.87378 0.87387 0.76154 0.88929 0.89910 0.87662 0.89063 0.76538 0.76707 0.90388 0.89443 0.84834 0.86290 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.42 12.74 -35.23 -0.45 -0.87 16 2 C -0.07 -0.04 2.81 36.01 0.10 0.06 16 3 Si 0.68 -0.13 29.78 -169.99 -5.06 -5.19 16 4 C -0.11 -0.36 5.42 -104.60 -0.57 -0.93 16 5 C -0.05 -0.13 9.60 -39.61 -0.38 -0.51 16 6 C -0.15 -0.39 9.99 -39.43 -0.39 -0.79 16 7 C 0.14 0.46 6.69 -39.22 -0.26 0.20 16 8 O -0.31 -0.78 10.14 -19.43 -0.20 -0.97 16 9 C 0.07 0.07 4.03 37.16 0.15 0.22 16 10 C -0.14 0.23 6.07 -27.88 -0.17 0.06 16 11 C 0.52 0.17 7.83 -10.98 -0.09 0.09 16 12 O -0.54 -2.49 15.58 5.56 0.09 -2.40 16 13 N -0.72 1.69 5.36 -52.88 -0.28 1.41 16 14 C 0.12 -0.22 4.25 -66.98 -0.28 -0.50 16 15 H 0.12 0.05 7.47 -51.93 -0.39 -0.34 16 16 C -0.14 0.61 7.39 -25.92 -0.19 0.42 16 17 C -0.12 0.37 3.85 -89.81 -0.35 0.02 16 18 H 0.10 -0.17 8.14 -51.93 -0.42 -0.59 16 19 C 0.14 -0.52 6.39 -4.04 -0.03 -0.55 16 20 N -0.38 0.08 3.69 -62.63 -0.23 -0.15 16 21 C 0.25 -0.08 12.63 -90.65 -1.14 -1.22 16 22 N -0.55 -1.52 11.19 -15.83 -0.18 -1.70 16 23 C 0.20 0.44 13.03 -91.81 -1.20 -0.76 16 24 N -0.31 -0.78 12.57 29.29 0.37 -0.42 16 25 C -0.13 0.19 7.44 -25.78 -0.19 0.00 16 26 C -0.20 -0.69 9.04 -39.43 -0.36 -1.04 16 27 C -0.08 -0.31 8.66 -39.60 -0.34 -0.65 16 28 H 0.38 -1.66 8.74 45.56 0.40 -1.26 16 29 H 0.07 -0.08 7.96 -51.93 -0.41 -0.50 16 30 H -0.26 -0.57 7.11 56.52 0.40 -0.17 16 31 H -0.25 -0.81 7.11 56.52 0.40 -0.41 16 32 H 0.14 0.13 8.06 -52.48 -0.42 -0.29 16 33 H 0.14 0.12 8.06 -52.49 -0.42 -0.30 16 34 H 0.07 0.10 7.61 -51.93 -0.39 -0.30 16 35 H 0.07 0.12 7.63 -51.93 -0.40 -0.28 16 36 H 0.11 -0.33 8.14 -51.93 -0.42 -0.75 16 37 H 0.11 -0.35 8.14 -51.93 -0.42 -0.78 16 38 H 0.40 -2.13 8.73 -40.82 -0.36 -2.48 16 39 H 0.09 -0.57 8.08 -51.93 -0.42 -0.99 16 40 H 0.08 -0.37 8.14 -51.93 -0.42 -0.79 16 41 H 0.11 -0.69 8.09 -51.93 -0.42 -1.11 16 42 H 0.09 -0.38 7.84 -51.93 -0.41 -0.78 16 43 H 0.22 -1.04 8.06 -52.49 -0.42 -1.46 16 44 H 0.22 -0.15 8.06 -52.49 -0.42 -0.57 16 45 H 0.08 0.09 8.14 -51.93 -0.42 -0.34 16 46 H 0.09 -0.15 7.89 -51.93 -0.41 -0.56 16 47 H 0.13 0.30 6.30 -52.48 -0.33 -0.03 16 48 H 0.12 0.37 4.87 -52.49 -0.26 0.11 16 LS Contribution 404.54 15.07 6.10 6.10 Total: 0.00 -12.70 404.54 -12.33 -25.03 By element: Atomic # 1 Polarization: -8.15 SS G_CDS: -6.80 Total: -14.95 kcal Atomic # 6 Polarization: -0.20 SS G_CDS: -5.69 Total: -5.88 kcal Atomic # 7 Polarization: -0.53 SS G_CDS: -0.32 Total: -0.86 kcal Atomic # 8 Polarization: -3.68 SS G_CDS: -0.56 Total: -4.24 kcal Atomic # 14 Polarization: -0.13 SS G_CDS: -5.06 Total: -5.19 kcal Total LS contribution 6.10 Total: 6.10 kcal Total: -12.70 -12.33 -25.03 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14644236_4549602.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 69.428 kcal (2) G-P(sol) polarization free energy of solvation -12.695 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 56.732 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.334 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.029 kcal (6) G-S(sol) free energy of system = (1) + (5) 44.398 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.25 seconds