Wall clock time and date at job start Sun Mar 7 2021 00:08:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86303 * 109.47261 * 2 1 4 4 C 1.50702 * 109.47024 * 240.00048 * 2 1 3 5 5 C 1.38245 * 119.97085 * 120.02606 * 4 2 1 6 6 C 1.38289 * 120.11166 * 179.97438 * 5 4 2 7 7 C 1.38126 * 120.05427 * 359.67971 * 6 5 4 8 8 C 1.38754 * 119.94325 * 0.59121 * 7 6 5 9 9 O 1.35899 * 120.05857 * 179.70228 * 8 7 6 10 10 C 1.42908 * 116.99727 * 359.72972 * 9 8 7 11 11 C 1.52998 * 109.47186 * 180.02562 * 10 9 8 12 12 C 1.52999 * 109.47303 * 179.97438 * 11 10 9 13 13 C 1.50698 * 109.47004 * 179.97438 * 12 11 10 14 14 O 1.21283 * 120.00472 * 0.02562 * 13 12 11 15 15 N 1.34777 * 119.99538 * 179.97438 * 13 12 11 16 16 C 1.46499 * 119.99665 * 179.72653 * 15 13 12 17 17 H 1.08998 * 112.85361 * 336.47110 * 16 15 13 18 18 C 1.53778 * 113.61557 * 107.77998 * 16 15 13 19 19 C 1.53785 * 87.08457 * 139.98112 * 18 16 15 20 20 H 1.08997 * 113.61414 * 89.11579 * 19 18 16 21 21 C 1.52995 * 113.69293 * 220.01437 * 19 18 16 22 22 N 1.46504 * 109.46802 * 272.52972 * 21 19 18 23 23 C 1.34428 * 126.82137 * 124.70869 * 22 21 19 24 24 N 1.30836 * 108.07995 * 179.89713 * 23 22 21 25 25 C 1.33242 * 109.82252 * 0.37957 * 24 23 22 26 26 N 1.30711 * 108.95239 * 359.76506 * 25 24 23 27 27 C 1.53786 * 113.61394 * 205.27970 * 16 15 13 28 28 C 1.38168 * 119.97157 * 300.00001 * 4 2 1 29 29 H 0.96701 * 113.99635 * 59.99677 * 1 2 3 30 30 H 1.09003 * 109.47208 * 120.00092 * 2 1 3 31 31 H 1.48499 * 109.99530 * 59.99802 * 3 2 1 32 32 H 1.48503 * 110.00031 * 181.31807 * 3 2 1 33 33 H 1.08000 * 119.94381 * 359.97012 * 5 4 2 34 34 H 1.07998 * 119.97432 * 179.97438 * 6 5 4 35 35 H 1.08003 * 120.03018 * 180.32101 * 7 6 5 36 36 H 1.08995 * 109.46963 * 59.99819 * 10 9 8 37 37 H 1.09001 * 109.47047 * 299.99772 * 10 9 8 38 38 H 1.09000 * 109.47250 * 59.99235 * 11 10 9 39 39 H 1.09007 * 109.46897 * 300.00114 * 11 10 9 40 40 H 1.09003 * 109.46690 * 59.99829 * 12 11 10 41 41 H 1.08993 * 109.46773 * 300.00165 * 12 11 10 42 42 H 0.97001 * 120.00485 * 0.02562 * 15 13 12 43 43 H 1.08997 * 113.61721 * 254.52733 * 18 16 15 44 44 H 1.09004 * 113.61436 * 25.43627 * 18 16 15 45 45 H 1.08997 * 109.47576 * 32.52960 * 21 19 18 46 46 H 1.09000 * 109.47801 * 152.53522 * 21 19 18 47 47 H 1.08006 * 125.96063 * 0.04405 * 23 22 21 48 48 H 1.08002 * 125.52149 * 179.79776 * 25 24 23 49 49 H 1.08999 * 113.61272 * 334.56869 * 27 16 15 50 50 H 1.09001 * 113.61514 * 105.47520 * 27 16 15 51 51 H 1.07992 * 120.02949 * 0.04835 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7265 -0.0381 -2.1398 6 6 3.1895 -0.6874 -3.2697 7 6 2.8637 -2.0116 -3.4889 8 6 2.0611 -2.6869 -2.5806 9 8 1.7341 -3.9881 -2.7971 10 6 2.2469 -4.5970 -3.9840 11 6 1.7762 -6.0511 -4.0554 12 6 2.3246 -6.7028 -5.3264 13 6 1.8615 -8.1352 -5.3964 14 8 1.1613 -8.5899 -4.5166 15 7 2.2246 -8.9106 -6.4372 16 6 1.7793 -10.3048 -6.5023 17 1 1.5311 -10.7160 -5.5238 18 6 0.7024 -10.5583 -7.5704 19 6 1.4318 -11.8763 -7.8802 20 1 1.0873 -12.7177 -7.2790 21 6 1.5038 -12.2028 -9.3731 22 7 0.3010 -12.9388 -9.7706 23 6 -0.5576 -12.6097 -10.7512 24 7 -1.4966 -13.5199 -10.7911 25 6 -1.2769 -14.4373 -9.8501 26 7 -0.1875 -14.1249 -9.1988 27 6 2.7049 -11.2089 -7.3335 28 6 1.5971 -2.0332 -1.4486 29 1 -0.3933 0.4418 -0.7651 30 1 1.7924 -0.5139 0.8900 31 1 1.5614 2.4678 1.2085 32 1 3.5347 1.7703 -0.0321 33 1 2.9865 0.9958 -1.9676 34 1 3.8102 -0.1599 -3.9788 35 1 3.2298 -2.5198 -4.3688 36 1 3.3363 -4.5679 -3.9657 37 1 1.8835 -4.0546 -4.8568 38 1 0.6867 -6.0798 -4.0737 39 1 2.1393 -6.5938 -3.1826 40 1 3.4141 -6.6740 -5.3083 41 1 1.9612 -6.1600 -6.1988 42 1 2.7843 -8.5469 -7.1410 43 1 -0.2968 -10.6988 -7.1582 44 1 0.7257 -9.8428 -8.3924 45 1 1.5689 -11.2771 -9.9449 46 1 2.3849 -12.8138 -9.5695 47 1 -0.4838 -11.7460 -11.3954 48 1 -1.8980 -15.2996 -9.6572 49 1 3.2756 -10.6712 -8.0906 50 1 3.3221 -11.8745 -6.7301 51 1 0.9756 -2.5578 -0.7381 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14644236_4549616.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:08:50 Heat of formation + Delta-G solvation = 36.087227 kcal Electronic energy + Delta-G solvation = -31329.241594 eV Core-core repulsion = 26812.362819 eV Total energy + Delta-G solvation = -4516.878774 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 373.183 amu Computer time = 1.43 seconds Orbital eigenvalues (eV) -43.00662 -41.42218 -41.21169 -39.78626 -39.13867 -37.28541 -35.56572 -34.97148 -34.02098 -32.45618 -32.14103 -31.27022 -29.47261 -28.27566 -27.00286 -26.82485 -24.81194 -23.72019 -23.38062 -22.98340 -22.34361 -21.87014 -21.60104 -20.66034 -19.19632 -18.52089 -18.21575 -17.80516 -17.56160 -17.46850 -17.17901 -16.84605 -16.69958 -16.49185 -16.33061 -16.08214 -15.86129 -15.39207 -15.20801 -15.12009 -14.89000 -14.78406 -14.41864 -14.25327 -14.14497 -13.92028 -13.76579 -13.51176 -13.43826 -13.24641 -13.06573 -12.82160 -12.75916 -12.49619 -12.42373 -12.27143 -12.08114 -11.91587 -11.72704 -11.70384 -11.60848 -10.97679 -10.91008 -10.73712 -10.59503 -10.49366 -10.17832 -9.90866 -9.23250 -5.03428 0.21283 0.41601 0.66800 1.27740 1.28386 1.52123 1.63411 1.81891 1.97239 2.05026 2.28344 2.68277 3.12897 3.21404 3.26905 3.38878 3.43946 3.47464 3.55397 3.63447 3.70764 3.73727 3.77341 3.84214 3.89250 3.97802 3.99332 4.08798 4.12222 4.16814 4.19059 4.21805 4.29776 4.34459 4.36104 4.40553 4.51182 4.54470 4.61291 4.64552 4.73394 4.79718 4.90485 4.97604 5.04011 5.11615 5.27324 5.27587 5.36718 5.37586 5.44338 5.47863 5.69673 5.80451 6.32812 6.40723 6.57571 7.10806 7.13499 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.538 6.538 2 C -0.070 4.070 3 Si 0.694 3.306 4 C -0.080 4.080 5 C -0.157 4.157 6 C -0.073 4.073 7 C -0.206 4.206 8 C 0.132 3.868 9 O -0.311 6.311 10 C 0.060 3.940 11 C -0.106 4.106 12 C -0.138 4.138 13 C 0.515 3.485 14 O -0.532 6.532 15 N -0.723 5.723 16 C 0.125 3.875 17 H 0.118 0.882 18 C -0.147 4.147 19 C -0.122 4.122 20 H 0.110 0.890 21 C 0.141 3.859 22 N -0.378 5.378 23 C 0.253 3.747 24 N -0.547 5.547 25 C 0.199 3.801 26 N -0.318 5.318 27 C -0.136 4.136 28 C -0.126 4.126 29 H 0.379 0.621 30 H 0.115 0.885 31 H -0.255 1.255 32 H -0.258 1.258 33 H 0.128 0.872 34 H 0.130 0.870 35 H 0.129 0.871 36 H 0.064 0.936 37 H 0.064 0.936 38 H 0.084 0.916 39 H 0.083 0.917 40 H 0.098 0.902 41 H 0.098 0.902 42 H 0.402 0.598 43 H 0.074 0.926 44 H 0.087 0.913 45 H 0.103 0.897 46 H 0.093 0.907 47 H 0.217 0.783 48 H 0.217 0.783 49 H 0.091 0.909 50 H 0.083 0.917 51 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.442 4.262 -7.225 9.999 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.181 4.181 3 Si 0.595 3.405 4 C -0.081 4.081 5 C -0.175 4.175 6 C -0.092 4.092 7 C -0.224 4.224 8 C 0.087 3.913 9 O -0.225 6.225 10 C -0.015 4.015 11 C -0.144 4.144 12 C -0.178 4.178 13 C 0.301 3.699 14 O -0.408 6.408 15 N -0.374 5.374 16 C 0.020 3.980 17 H 0.136 0.864 18 C -0.186 4.186 19 C -0.141 4.141 20 H 0.128 0.872 21 C 0.019 3.981 22 N -0.169 5.169 23 C -0.044 4.044 24 N -0.274 5.274 25 C -0.103 4.103 26 N -0.145 5.145 27 C -0.175 4.175 28 C -0.145 4.145 29 H 0.227 0.773 30 H 0.133 0.867 31 H -0.180 1.180 32 H -0.183 1.183 33 H 0.146 0.854 34 H 0.148 0.852 35 H 0.147 0.853 36 H 0.082 0.918 37 H 0.083 0.917 38 H 0.102 0.898 39 H 0.102 0.898 40 H 0.117 0.883 41 H 0.117 0.883 42 H 0.236 0.764 43 H 0.092 0.908 44 H 0.105 0.895 45 H 0.121 0.879 46 H 0.111 0.889 47 H 0.234 0.766 48 H 0.234 0.766 49 H 0.110 0.890 50 H 0.102 0.898 51 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 5.481 3.698 -5.091 8.345 hybrid contribution 0.685 -0.288 -0.659 0.993 sum 6.166 3.410 -5.749 9.094 Atomic orbital electron populations 1.86517 1.16917 1.81712 1.49221 1.25125 0.85394 1.10249 0.97341 0.94628 0.80911 0.77831 0.87085 1.20148 0.97457 0.93908 0.96570 1.20925 1.01081 0.99847 0.95606 1.20910 0.97844 0.93716 0.96681 1.21309 1.03501 0.96489 1.01139 1.19026 0.94379 0.83461 0.94449 1.86091 1.70898 1.22401 1.43102 1.22819 0.98544 0.93891 0.86282 1.21236 1.03061 0.92325 0.97764 1.21535 1.03035 0.92905 1.00325 1.20636 0.79854 0.88088 0.81295 1.90763 1.36929 1.74836 1.38259 1.45987 1.54136 1.12019 1.25290 1.22440 0.94956 0.80916 0.99708 0.86436 1.23577 0.99534 0.96195 0.99310 1.22713 0.97994 0.98545 0.94865 0.87169 1.21860 0.84463 0.95731 0.96011 1.50558 1.21524 1.18869 1.25947 1.26097 0.86747 0.99525 0.92032 1.70570 1.26804 1.05150 1.24861 1.26064 0.94011 0.99360 0.90911 1.78041 1.14777 0.99371 1.22345 1.23374 0.96341 0.98328 0.99483 1.20276 1.03086 0.93992 0.97122 0.77320 0.86732 1.17966 1.18294 0.85442 0.85221 0.85283 0.91799 0.91739 0.89767 0.89800 0.88334 0.88330 0.76374 0.90751 0.89452 0.87920 0.88886 0.76628 0.76638 0.89022 0.89843 0.84785 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.46 12.77 -35.23 -0.45 -0.90 16 2 C -0.07 -0.02 2.82 36.01 0.10 0.08 16 3 Si 0.69 -0.63 29.79 -169.99 -5.06 -5.69 16 4 C -0.08 -0.07 5.39 -104.64 -0.56 -0.63 16 5 C -0.16 0.04 8.67 -39.56 -0.34 -0.31 16 6 C -0.07 0.04 10.04 -39.60 -0.40 -0.36 16 7 C -0.21 -0.01 9.04 -39.43 -0.36 -0.37 16 8 C 0.13 0.26 6.69 -39.21 -0.26 0.00 16 9 O -0.31 -0.70 10.14 -19.42 -0.20 -0.89 16 10 C 0.06 -0.08 4.74 37.16 0.18 0.10 16 11 C -0.11 0.08 4.87 -26.73 -0.13 -0.05 16 12 C -0.14 0.47 5.70 -27.88 -0.16 0.31 16 13 C 0.51 -0.15 7.83 -10.99 -0.09 -0.24 16 14 O -0.53 -2.48 15.58 5.55 0.09 -2.40 16 15 N -0.72 2.19 5.35 -53.02 -0.28 1.91 16 16 C 0.12 -0.27 4.24 -67.12 -0.28 -0.55 16 17 H 0.12 0.05 7.46 -51.93 -0.39 -0.34 16 18 C -0.15 0.37 7.43 -25.92 -0.19 0.17 16 19 C -0.12 0.37 3.87 -89.80 -0.35 0.02 16 20 H 0.11 -0.07 8.00 -51.93 -0.42 -0.48 16 21 C 0.14 -0.52 6.39 -4.04 -0.03 -0.55 16 22 N -0.38 0.06 3.69 -62.63 -0.23 -0.17 16 23 C 0.25 -0.07 12.63 -90.65 -1.14 -1.22 16 24 N -0.55 -1.52 11.19 -15.83 -0.18 -1.70 16 25 C 0.20 0.44 13.03 -91.81 -1.20 -0.76 16 26 N -0.32 -0.83 12.45 29.29 0.36 -0.47 16 27 C -0.14 0.60 7.39 -25.91 -0.19 0.41 16 28 C -0.13 -0.28 9.55 -39.43 -0.38 -0.66 16 29 H 0.38 -1.18 8.70 45.56 0.40 -0.78 16 30 H 0.12 0.09 7.96 -51.93 -0.41 -0.32 16 31 H -0.25 -0.59 7.11 56.52 0.40 -0.19 16 32 H -0.26 -0.33 7.11 56.52 0.40 0.07 16 33 H 0.13 -0.27 4.87 -52.49 -0.26 -0.52 16 34 H 0.13 -0.37 8.06 -52.49 -0.42 -0.80 16 35 H 0.13 -0.27 6.30 -52.48 -0.33 -0.60 16 36 H 0.06 -0.17 7.65 -51.93 -0.40 -0.57 16 37 H 0.06 -0.18 7.67 -51.93 -0.40 -0.58 16 38 H 0.08 0.08 8.10 -51.93 -0.42 -0.34 16 39 H 0.08 0.08 8.10 -51.93 -0.42 -0.34 16 40 H 0.10 -0.53 8.14 -51.93 -0.42 -0.96 16 41 H 0.10 -0.54 8.14 -51.93 -0.42 -0.96 16 42 H 0.40 -2.49 8.73 -40.82 -0.36 -2.84 16 43 H 0.07 0.00 8.14 -51.93 -0.42 -0.43 16 44 H 0.09 -0.34 7.90 -51.93 -0.41 -0.75 16 45 H 0.10 -0.68 7.79 -51.93 -0.40 -1.08 16 46 H 0.09 -0.38 8.14 -51.93 -0.42 -0.80 16 47 H 0.22 -1.03 8.06 -52.48 -0.42 -1.45 16 48 H 0.22 -0.18 8.06 -52.49 -0.42 -0.60 16 49 H 0.09 -0.58 8.08 -51.93 -0.42 -1.00 16 50 H 0.08 -0.32 8.14 -51.93 -0.42 -0.75 16 51 H 0.13 0.36 8.06 -52.49 -0.42 -0.07 16 LS Contribution 425.75 15.07 6.42 6.42 Total: 0.00 -13.03 425.75 -12.95 -25.99 By element: Atomic # 1 Polarization: -9.85 SS G_CDS: -7.64 Total: -17.49 kcal Atomic # 6 Polarization: 1.18 SS G_CDS: -5.78 Total: -4.61 kcal Atomic # 7 Polarization: -0.10 SS G_CDS: -0.33 Total: -0.42 kcal Atomic # 8 Polarization: -3.63 SS G_CDS: -0.56 Total: -4.19 kcal Atomic # 14 Polarization: -0.63 SS G_CDS: -5.06 Total: -5.69 kcal Total LS contribution 6.42 Total: 6.42 kcal Total: -13.03 -12.95 -25.99 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14644236_4549616.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 62.074 kcal (2) G-P(sol) polarization free energy of solvation -13.034 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 49.040 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.952 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.987 kcal (6) G-S(sol) free energy of system = (1) + (5) 36.087 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.43 seconds