Wall clock time and date at job start Sun Mar 7 2021 00:09:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35990 * 116.99765 * 2 1 4 4 C 1.39155 * 120.06776 * 180.02562 * 3 2 1 5 5 O 1.35999 * 120.07468 * 359.97438 * 4 3 2 6 6 C 1.42903 * 116.99581 * 179.72880 * 5 4 3 7 7 C 1.50700 * 109.46603 * 180.02562 * 6 5 4 8 8 O 1.21279 * 120.00260 * 359.97438 * 7 6 5 9 9 N 1.34774 * 119.99982 * 180.02562 * 7 6 5 10 10 C 1.46499 * 120.00118 * 179.97438 * 9 7 6 11 11 H 1.09000 * 112.85206 * 23.79873 * 10 9 7 12 12 C 1.53780 * 113.61673 * 154.99752 * 10 9 7 13 13 C 1.53780 * 87.08488 * 140.06112 * 12 10 9 14 14 H 1.09003 * 113.61137 * 89.20025 * 13 12 10 15 15 C 1.52997 * 113.61900 * 220.01941 * 13 12 10 16 16 N 1.46505 * 109.47212 * 184.99939 * 15 13 12 17 17 C 1.34431 * 126.82034 * 124.70925 * 16 15 13 18 18 N 1.30831 * 108.07452 * 179.89522 * 17 16 15 19 19 C 1.33242 * 109.83134 * 0.38128 * 18 17 16 20 20 N 1.30720 * 108.94259 * 359.76538 * 19 18 17 21 21 C 1.53787 * 87.08169 * 334.56869 * 13 12 10 22 22 C 1.38572 * 119.85000 * 179.72843 * 4 3 2 23 23 C 1.38236 * 119.99899 * 0.27216 * 22 4 3 24 24 N 1.48010 * 119.92390 * 180.02562 * 23 22 4 25 25 O 1.21805 * 120.00063 * 359.97438 * 24 23 22 26 26 O 1.21798 * 119.99781 * 180.02562 * 24 23 22 27 27 C 1.38253 * 120.14955 * 359.97438 * 23 22 4 28 28 C 1.50701 * 119.92767 * 179.97438 * 27 23 22 29 29 O 1.42903 * 109.46879 * 75.00060 * 28 27 23 30 30 Si 1.86294 * 109.47088 * 195.00137 * 28 27 23 31 31 C 1.38248 * 120.14455 * 0.02562 * 27 23 22 32 32 H 1.09003 * 109.47289 * 180.02562 * 1 2 3 33 33 H 1.08996 * 109.47123 * 299.99672 * 1 2 3 34 34 H 1.09002 * 109.47348 * 60.00309 * 1 2 3 35 35 H 1.08995 * 109.46989 * 60.00542 * 6 5 4 36 36 H 1.09000 * 109.46919 * 300.00225 * 6 5 4 37 37 H 0.97006 * 119.99965 * 359.97438 * 9 7 6 38 38 H 1.09004 * 113.61321 * 25.51394 * 12 10 9 39 39 H 1.09001 * 113.69385 * 254.62453 * 12 10 9 40 40 H 1.09002 * 109.47153 * 64.99931 * 15 13 12 41 41 H 1.09001 * 109.46832 * 305.00122 * 15 13 12 42 42 H 1.08004 * 125.96211 * 0.03907 * 17 16 15 43 43 H 1.07995 * 125.52859 * 179.73289 * 19 18 17 44 44 H 1.08998 * 113.61477 * 139.97815 * 21 13 12 45 45 H 1.08992 * 113.61461 * 270.88344 * 21 13 12 46 46 H 1.08003 * 119.99656 * 180.25280 * 22 4 3 47 47 H 1.08997 * 109.47093 * 315.00688 * 28 27 23 48 48 H 0.96708 * 113.99577 * 60.00034 * 29 28 27 49 49 H 1.48494 * 110.00152 * 58.68190 * 30 28 27 50 50 H 1.48506 * 109.99989 * 180.02562 * 30 28 27 51 51 H 1.07997 * 119.99477 * 180.02562 * 31 27 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4359 1.2862 -0.0005 5 8 4.1795 0.1475 -0.0005 6 6 5.6003 0.3006 -0.0071 7 6 6.2518 -1.0583 -0.0067 8 8 5.5670 -2.0592 -0.0009 9 7 7.5956 -1.1613 -0.0119 10 6 8.2290 -2.4823 -0.0109 11 1 7.5817 -3.2624 -0.4116 12 6 9.6444 -2.4873 -0.6121 13 6 10.0335 -3.4618 0.5121 14 1 9.8809 -4.5097 0.2539 15 6 11.4176 -3.1917 1.1056 16 7 11.7443 -4.2373 2.0784 17 6 12.8334 -5.0254 2.0789 18 7 12.7555 -5.8248 3.1116 19 6 11.6320 -5.5836 3.7862 20 7 10.9790 -4.6196 3.1921 21 6 8.8827 -2.8532 1.3308 22 6 4.0603 2.5233 -0.0062 23 6 3.3029 3.6798 -0.0057 24 7 3.9716 5.0002 -0.0123 25 8 5.1878 5.0670 -0.0178 26 8 3.3056 6.0200 -0.0114 27 6 1.9224 3.6057 0.0000 28 6 1.1017 4.8696 0.0012 29 8 1.1295 5.4567 -1.3014 30 14 -0.6575 4.4672 0.4636 31 6 1.2932 2.3747 0.0057 32 1 -0.3634 -1.0277 0.0005 33 1 -0.3633 0.5138 0.8900 34 1 -0.3634 0.5138 -0.8900 35 1 5.9103 0.8528 0.8800 36 1 5.9026 0.8479 -0.9000 37 1 8.1434 -0.3608 -0.0162 38 1 10.1492 -1.5233 -0.5485 39 1 9.6956 -2.9270 -1.6082 40 1 11.4171 -2.2211 1.6018 41 1 12.1610 -3.1918 0.3085 42 1 13.6342 -5.0011 1.3546 43 1 11.3125 -6.1011 4.6787 44 1 8.3176 -3.5886 1.9033 45 1 9.1792 -1.9893 1.9255 46 1 5.1386 2.5839 -0.0108 47 1 1.5162 5.5713 0.7249 48 1 0.7747 4.8867 -1.9974 49 1 -0.6969 3.8269 1.8028 50 1 -1.4775 5.7053 0.4678 51 1 0.2147 2.3197 0.0097 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14644236_4549636.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:09:10 Heat of formation + Delta-G solvation = 31.755977 kcal Electronic energy + Delta-G solvation = -39716.657578 eV Core-core repulsion = 34205.429978 eV Total energy + Delta-G solvation = -5511.227600 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 420.161 amu Computer time = 1.76 seconds Orbital eigenvalues (eV) -43.26015 -43.00982 -42.14902 -41.40671 -40.27613 -39.41128 -39.10285 -37.57917 -37.09447 -35.60624 -34.19779 -32.73053 -32.58986 -32.14334 -30.32808 -29.14409 -28.76004 -27.88625 -26.98186 -25.90167 -24.73726 -23.82544 -23.20827 -22.91363 -22.52527 -21.81259 -20.97618 -20.74302 -19.71260 -19.58523 -18.75442 -18.60436 -18.49650 -18.27641 -17.85844 -17.74663 -17.53608 -17.19312 -17.03674 -16.88978 -16.51009 -16.17332 -16.15609 -15.91379 -15.69919 -15.66406 -15.22613 -15.09279 -14.90899 -14.70849 -14.43296 -14.08177 -13.98887 -13.91111 -13.71074 -13.56124 -13.31154 -13.15951 -13.02004 -12.74735 -12.60636 -12.55370 -12.42208 -12.30201 -12.21988 -12.12930 -11.96648 -11.69349 -11.62263 -11.04900 -10.94099 -10.74945 -10.65065 -10.60409 -10.55320 -10.27163 -9.55990 -5.29010 -1.24920 -0.53594 0.29657 0.40781 0.66120 1.01253 1.10202 1.28115 1.32682 1.42902 1.69300 1.81235 1.84145 2.04483 2.20122 2.88208 3.02968 3.05157 3.16017 3.18663 3.29120 3.34318 3.38063 3.43257 3.44833 3.50112 3.61056 3.67123 3.77171 3.77577 3.83156 3.90354 3.92762 3.94990 3.95679 4.03500 4.13955 4.22705 4.35502 4.36728 4.39872 4.47844 4.51479 4.52434 4.64373 4.71389 4.92848 4.95658 5.26446 5.29197 5.42088 5.45234 5.47506 5.79474 5.89502 6.18333 6.42013 6.75993 6.94016 7.13268 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.013 3.987 2 O -0.284 6.284 3 C 0.171 3.829 4 C 0.109 3.891 5 O -0.264 6.264 6 C 0.031 3.969 7 C 0.519 3.481 8 O -0.507 6.507 9 N -0.716 5.716 10 C 0.124 3.876 11 H 0.119 0.881 12 C -0.136 4.136 13 C -0.119 4.119 14 H 0.101 0.899 15 C 0.140 3.860 16 N -0.380 5.380 17 C 0.252 3.748 18 N -0.547 5.547 19 C 0.197 3.803 20 N -0.313 5.313 21 C -0.135 4.135 22 C -0.118 4.118 23 C -0.025 4.025 24 N 0.032 4.968 25 O -0.174 6.174 26 O -0.129 6.129 27 C -0.043 4.043 28 C -0.074 4.074 29 O -0.515 6.515 30 Si 0.674 3.326 31 C -0.177 4.177 32 H 0.114 0.886 33 H 0.064 0.936 34 H 0.068 0.932 35 H 0.100 0.900 36 H 0.100 0.900 37 H 0.404 0.596 38 H 0.093 0.907 39 H 0.084 0.916 40 H 0.091 0.909 41 H 0.105 0.895 42 H 0.218 0.782 43 H 0.217 0.783 44 H 0.079 0.921 45 H 0.088 0.912 46 H 0.166 0.834 47 H 0.139 0.861 48 H 0.374 0.626 49 H -0.252 1.252 50 H -0.242 1.242 51 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.314 -1.558 -4.119 4.415 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.082 4.082 2 O -0.195 6.195 3 C 0.122 3.878 4 C 0.062 3.938 5 O -0.176 6.176 6 C -0.048 4.048 7 C 0.303 3.697 8 O -0.380 6.380 9 N -0.370 5.370 10 C 0.020 3.980 11 H 0.137 0.863 12 C -0.175 4.175 13 C -0.139 4.139 14 H 0.119 0.881 15 C 0.018 3.982 16 N -0.171 5.171 17 C -0.045 4.045 18 N -0.274 5.274 19 C -0.106 4.106 20 N -0.140 5.140 21 C -0.174 4.174 22 C -0.138 4.138 23 C -0.109 4.109 24 N 0.551 4.449 25 O -0.385 6.385 26 O -0.349 6.349 27 C -0.045 4.045 28 C -0.184 4.184 29 O -0.319 6.319 30 Si 0.574 3.426 31 C -0.196 4.196 32 H 0.132 0.868 33 H 0.083 0.917 34 H 0.087 0.913 35 H 0.118 0.882 36 H 0.118 0.882 37 H 0.239 0.761 38 H 0.112 0.888 39 H 0.102 0.898 40 H 0.110 0.890 41 H 0.124 0.876 42 H 0.235 0.765 43 H 0.233 0.767 44 H 0.097 0.903 45 H 0.106 0.894 46 H 0.184 0.816 47 H 0.156 0.844 48 H 0.220 0.780 49 H -0.176 1.176 50 H -0.166 1.166 51 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges -1.966 -2.628 -2.920 4.393 hybrid contribution 1.282 1.245 0.042 1.787 sum -0.684 -1.383 -2.878 3.265 Atomic orbital electron populations 1.23424 0.76779 1.05804 1.02181 1.86347 1.22509 1.24210 1.86480 1.18448 0.89042 0.85906 0.94366 1.17855 0.88427 0.85328 1.02220 1.86341 1.16834 1.26020 1.88421 1.22675 0.80264 0.97248 1.04603 1.19882 0.82741 0.90143 0.76887 1.90811 1.62598 1.37844 1.46750 1.45774 1.05714 1.09521 1.75946 1.22564 0.92753 0.85308 0.97412 0.86307 1.23390 0.95203 1.00094 0.98824 1.22626 0.93454 1.00656 0.97173 0.88051 1.21863 0.97859 0.89073 0.89373 1.50582 1.16526 1.28901 1.21075 1.26140 0.92072 0.88659 0.97592 1.70567 1.22054 1.27100 1.07634 1.26080 0.89469 0.94617 1.00403 1.78088 1.18890 1.18062 0.98989 1.23473 0.96167 1.01216 0.96553 1.20798 1.02183 0.88969 1.01836 1.20398 0.91982 0.83140 1.15417 1.43382 1.00978 1.02618 0.97909 1.94540 0.95804 1.93723 1.54401 1.94577 1.64444 1.24072 1.51856 1.20103 0.91603 0.97059 0.95715 1.25468 1.08476 0.93268 0.91205 1.86715 1.86507 1.43412 1.15250 0.95572 0.76372 0.85263 0.85378 1.20902 1.00511 0.89593 1.08548 0.86756 0.91732 0.91344 0.88249 0.88183 0.76137 0.88842 0.89771 0.89045 0.87635 0.76535 0.76716 0.90257 0.89374 0.81649 0.84408 0.77977 1.17640 1.16553 0.82014 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.05 9.81 101.05 0.99 0.94 16 2 O -0.28 -0.03 10.28 -34.22 -0.35 -0.39 16 3 C 0.17 -0.04 6.70 -39.12 -0.26 -0.30 16 4 C 0.11 0.04 6.70 -39.12 -0.26 -0.23 16 5 O -0.26 -0.39 9.45 -47.37 -0.45 -0.83 16 6 C 0.03 -0.06 5.22 36.01 0.19 0.12 16 7 C 0.52 0.09 7.91 -10.99 -0.09 0.01 16 8 O -0.51 -2.69 16.10 -14.35 -0.23 -2.92 16 9 N -0.72 2.19 5.36 -53.02 -0.28 1.91 16 10 C 0.12 -0.30 4.24 -67.11 -0.28 -0.59 16 11 H 0.12 -0.02 7.46 -51.93 -0.39 -0.41 16 12 C -0.14 0.69 7.39 -25.92 -0.19 0.50 16 13 C -0.12 0.43 3.85 -89.81 -0.35 0.08 16 14 H 0.10 -0.22 8.14 -51.93 -0.42 -0.64 16 15 C 0.14 -0.58 6.39 -4.04 -0.03 -0.60 16 16 N -0.38 0.20 3.69 -62.63 -0.23 -0.03 16 17 C 0.25 -0.14 12.63 -90.65 -1.14 -1.28 16 18 N -0.55 -1.40 11.19 -15.83 -0.18 -1.57 16 19 C 0.20 0.39 13.03 -91.81 -1.20 -0.81 16 20 N -0.31 -0.69 12.57 29.29 0.37 -0.32 16 21 C -0.14 0.27 7.43 -25.91 -0.19 0.08 16 22 C -0.12 0.03 8.54 -39.46 -0.34 -0.31 16 23 C -0.03 -0.04 6.85 -79.95 -0.55 -0.58 16 24 N 0.03 0.13 4.45 33.96 0.15 0.28 16 25 O -0.17 -0.81 18.44 -29.46 -0.54 -1.35 16 26 O -0.13 -0.69 14.62 -35.97 -0.53 -1.21 16 27 C -0.04 0.01 5.26 -104.61 -0.55 -0.54 16 28 C -0.07 0.01 1.74 36.01 0.06 0.08 16 29 O -0.52 -0.13 11.79 -55.49 -0.65 -0.78 16 30 Si 0.67 -1.51 29.91 -169.99 -5.08 -6.60 16 31 C -0.18 0.36 7.64 -39.46 -0.30 0.06 16 32 H 0.11 -0.59 8.14 -51.93 -0.42 -1.01 16 33 H 0.06 -0.35 7.65 -51.93 -0.40 -0.74 16 34 H 0.07 -0.43 7.68 -51.93 -0.40 -0.83 16 35 H 0.10 -0.45 7.66 -51.93 -0.40 -0.85 16 36 H 0.10 -0.48 7.66 -51.93 -0.40 -0.88 16 37 H 0.40 -2.55 8.73 -40.82 -0.36 -2.90 16 38 H 0.09 -0.63 8.08 -51.93 -0.42 -1.05 16 39 H 0.08 -0.43 8.14 -51.93 -0.42 -0.85 16 40 H 0.09 -0.41 7.84 -51.93 -0.41 -0.82 16 41 H 0.11 -0.73 8.09 -51.93 -0.42 -1.15 16 42 H 0.22 -1.09 8.06 -52.48 -0.42 -1.51 16 43 H 0.22 -0.20 8.06 -52.49 -0.42 -0.62 16 44 H 0.08 0.05 8.14 -51.93 -0.42 -0.38 16 45 H 0.09 -0.20 7.90 -51.93 -0.41 -0.61 16 46 H 0.17 -0.38 5.85 -52.48 -0.31 -0.69 16 47 H 0.14 0.21 6.07 -51.93 -0.32 -0.10 16 48 H 0.37 -1.61 8.70 45.56 0.40 -1.21 16 49 H -0.25 0.05 7.11 56.52 0.40 0.45 16 50 H -0.24 -0.27 7.11 56.52 0.40 0.14 16 51 H 0.16 -0.82 3.36 -52.49 -0.18 -0.99 16 LS Contribution 434.82 15.07 6.55 6.55 Total: 0.00 -16.24 434.82 -12.07 -28.32 By element: Atomic # 1 Polarization: -11.55 SS G_CDS: -6.13 Total: -17.68 kcal Atomic # 6 Polarization: 1.11 SS G_CDS: -4.49 Total: -3.38 kcal Atomic # 7 Polarization: 0.44 SS G_CDS: -0.17 Total: 0.27 kcal Atomic # 8 Polarization: -4.73 SS G_CDS: -2.75 Total: -7.49 kcal Atomic # 14 Polarization: -1.51 SS G_CDS: -5.08 Total: -6.60 kcal Total LS contribution 6.55 Total: 6.55 kcal Total: -16.24 -12.07 -28.32 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14644236_4549636.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 60.074 kcal (2) G-P(sol) polarization free energy of solvation -16.245 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 43.829 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.073 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.318 kcal (6) G-S(sol) free energy of system = (1) + (5) 31.756 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.76 seconds