Wall clock time and date at job start Sun Mar 7 2021 00:09:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35990 * 116.99765 * 2 1 4 4 C 1.39155 * 120.06776 * 180.02562 * 3 2 1 5 5 O 1.35999 * 120.07468 * 359.97438 * 4 3 2 6 6 C 1.42903 * 116.99581 * 179.72880 * 5 4 3 7 7 C 1.50700 * 109.46603 * 180.02562 * 6 5 4 8 8 O 1.21279 * 120.00260 * 359.97438 * 7 6 5 9 9 N 1.34774 * 119.99982 * 180.02562 * 7 6 5 10 10 C 1.46499 * 120.00118 * 179.97438 * 9 7 6 11 11 H 1.09000 * 112.85206 * 23.79873 * 10 9 7 12 12 C 1.53780 * 113.61673 * 154.99752 * 10 9 7 13 13 C 1.53780 * 87.08488 * 140.06112 * 12 10 9 14 14 H 1.09003 * 113.61137 * 89.20025 * 13 12 10 15 15 C 1.52997 * 113.61900 * 220.01941 * 13 12 10 16 16 N 1.46505 * 109.47212 * 184.99939 * 15 13 12 17 17 C 1.34431 * 126.82034 * 124.70925 * 16 15 13 18 18 N 1.30831 * 108.07452 * 179.89522 * 17 16 15 19 19 C 1.33242 * 109.83134 * 0.38128 * 18 17 16 20 20 N 1.30720 * 108.94259 * 359.76538 * 19 18 17 21 21 C 1.53787 * 87.08169 * 334.56869 * 13 12 10 22 22 C 1.38572 * 119.85000 * 179.72843 * 4 3 2 23 23 C 1.38236 * 119.99899 * 0.27216 * 22 4 3 24 24 N 1.48010 * 119.92390 * 180.02562 * 23 22 4 25 25 O 1.21805 * 120.00063 * 359.97438 * 24 23 22 26 26 O 1.21798 * 119.99781 * 180.02562 * 24 23 22 27 27 C 1.38253 * 120.14955 * 359.97438 * 23 22 4 28 28 C 1.50701 * 119.92767 * 179.97438 * 27 23 22 29 29 O 1.42903 * 109.46879 * 75.00060 * 28 27 23 30 30 Si 1.86294 * 109.47088 * 195.00137 * 28 27 23 31 31 C 1.38248 * 120.14455 * 0.02562 * 27 23 22 32 32 H 1.09003 * 109.47289 * 180.02562 * 1 2 3 33 33 H 1.08996 * 109.47123 * 299.99672 * 1 2 3 34 34 H 1.09002 * 109.47348 * 60.00309 * 1 2 3 35 35 H 1.08995 * 109.46989 * 60.00542 * 6 5 4 36 36 H 1.09000 * 109.46919 * 300.00225 * 6 5 4 37 37 H 0.97006 * 119.99965 * 359.97438 * 9 7 6 38 38 H 1.09004 * 113.61321 * 25.51394 * 12 10 9 39 39 H 1.09001 * 113.69385 * 254.62453 * 12 10 9 40 40 H 1.09002 * 109.47153 * 64.99931 * 15 13 12 41 41 H 1.09001 * 109.46832 * 305.00122 * 15 13 12 42 42 H 1.08004 * 125.96211 * 0.03907 * 17 16 15 43 43 H 1.07995 * 125.52859 * 179.73289 * 19 18 17 44 44 H 1.08998 * 113.61477 * 139.97815 * 21 13 12 45 45 H 1.08992 * 113.61461 * 270.88344 * 21 13 12 46 46 H 1.08003 * 119.99656 * 180.25280 * 22 4 3 47 47 H 1.08997 * 109.47093 * 315.00688 * 28 27 23 48 48 H 0.96708 * 113.99577 * 60.00034 * 29 28 27 49 49 H 1.48494 * 110.00152 * 58.68190 * 30 28 27 50 50 H 1.48506 * 109.99989 * 180.02562 * 30 28 27 51 51 H 1.07997 * 119.99477 * 180.02562 * 31 27 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4359 1.2862 -0.0005 5 8 4.1795 0.1475 -0.0005 6 6 5.6003 0.3006 -0.0071 7 6 6.2518 -1.0583 -0.0067 8 8 5.5670 -2.0592 -0.0009 9 7 7.5956 -1.1613 -0.0119 10 6 8.2290 -2.4823 -0.0109 11 1 7.5817 -3.2624 -0.4116 12 6 9.6444 -2.4873 -0.6121 13 6 10.0335 -3.4618 0.5121 14 1 9.8809 -4.5097 0.2539 15 6 11.4176 -3.1917 1.1056 16 7 11.7443 -4.2373 2.0784 17 6 12.8334 -5.0254 2.0789 18 7 12.7555 -5.8248 3.1116 19 6 11.6320 -5.5836 3.7862 20 7 10.9790 -4.6196 3.1921 21 6 8.8827 -2.8532 1.3308 22 6 4.0603 2.5233 -0.0062 23 6 3.3029 3.6798 -0.0057 24 7 3.9716 5.0002 -0.0123 25 8 5.1878 5.0670 -0.0178 26 8 3.3056 6.0200 -0.0114 27 6 1.9224 3.6057 0.0000 28 6 1.1017 4.8696 0.0012 29 8 1.1295 5.4567 -1.3014 30 14 -0.6575 4.4672 0.4636 31 6 1.2932 2.3747 0.0057 32 1 -0.3634 -1.0277 0.0005 33 1 -0.3633 0.5138 0.8900 34 1 -0.3634 0.5138 -0.8900 35 1 5.9103 0.8528 0.8800 36 1 5.9026 0.8479 -0.9000 37 1 8.1434 -0.3608 -0.0162 38 1 10.1492 -1.5233 -0.5485 39 1 9.6956 -2.9270 -1.6082 40 1 11.4171 -2.2211 1.6018 41 1 12.1610 -3.1918 0.3085 42 1 13.6342 -5.0011 1.3546 43 1 11.3125 -6.1011 4.6787 44 1 8.3176 -3.5886 1.9033 45 1 9.1792 -1.9893 1.9255 46 1 5.1386 2.5839 -0.0108 47 1 1.5162 5.5713 0.7249 48 1 0.7747 4.8867 -1.9974 49 1 -0.6969 3.8269 1.8028 50 1 -1.4775 5.7053 0.4678 51 1 0.2147 2.3197 0.0097 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14644236_4549636.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:09:08 Heat of formation + Delta-G solvation = 27.509024 kcal Electronic energy + Delta-G solvation = -39716.841740 eV Core-core repulsion = 34205.429978 eV Total energy + Delta-G solvation = -5511.411762 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 420.161 amu Computer time = 2.04 seconds Orbital eigenvalues (eV) -43.41329 -42.97265 -42.13457 -41.32048 -40.14936 -39.34538 -39.08681 -37.74500 -37.13956 -35.52099 -34.12852 -32.69000 -32.54153 -32.15282 -30.21994 -28.94083 -28.54907 -27.92062 -26.73858 -25.88049 -24.63930 -23.77013 -23.21097 -22.85673 -22.44678 -21.74820 -20.79256 -20.75161 -19.85346 -19.52049 -18.74097 -18.67680 -18.51165 -18.19421 -17.76513 -17.70586 -17.42519 -17.08565 -16.86980 -16.74680 -16.41707 -16.10550 -16.09556 -15.82369 -15.63944 -15.55763 -15.14866 -14.98907 -14.79882 -14.53016 -14.40084 -13.95299 -13.90408 -13.70035 -13.49982 -13.45674 -13.19944 -13.03821 -12.88755 -12.68352 -12.50855 -12.45498 -12.34916 -12.28280 -12.24039 -12.22484 -11.93697 -11.79271 -11.42969 -11.07731 -10.96930 -10.78734 -10.56392 -10.54520 -10.47343 -10.16925 -9.50645 -5.14608 -1.37648 -0.44920 0.15111 0.29084 0.71217 1.11864 1.23694 1.34970 1.47992 1.56433 1.88148 1.88611 1.92791 2.01801 2.34581 2.96717 3.16202 3.25749 3.30124 3.41640 3.44775 3.49781 3.54622 3.55037 3.66069 3.72707 3.85974 3.91606 3.92694 3.96100 4.04472 4.09877 4.12696 4.19827 4.21430 4.33203 4.37692 4.40108 4.53741 4.57381 4.69891 4.70786 4.72172 4.79891 4.80426 4.95890 5.04079 5.12308 5.23989 5.34256 5.46228 5.47519 5.58597 5.96533 6.04800 6.38256 6.45781 6.70659 7.06673 7.14519 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.004 4.004 2 O -0.308 6.308 3 C 0.170 3.830 4 C 0.100 3.900 5 O -0.292 6.292 6 C 0.026 3.974 7 C 0.515 3.485 8 O -0.570 6.570 9 N -0.697 5.697 10 C 0.115 3.885 11 H 0.089 0.911 12 C -0.111 4.111 13 C -0.113 4.113 14 H 0.083 0.917 15 C 0.134 3.866 16 N -0.379 5.379 17 C 0.256 3.744 18 N -0.586 5.586 19 C 0.183 3.817 20 N -0.345 5.345 21 C -0.137 4.137 22 C -0.109 4.109 23 C -0.046 4.046 24 N 0.036 4.964 25 O -0.185 6.185 26 O -0.166 6.166 27 C -0.040 4.040 28 C -0.091 4.091 29 O -0.536 6.536 30 Si 0.786 3.214 31 C -0.163 4.163 32 H 0.121 0.879 33 H 0.079 0.921 34 H 0.094 0.906 35 H 0.126 0.874 36 H 0.131 0.869 37 H 0.423 0.577 38 H 0.124 0.876 39 H 0.091 0.909 40 H 0.101 0.899 41 H 0.145 0.855 42 H 0.260 0.740 43 H 0.228 0.772 44 H 0.042 0.958 45 H 0.095 0.905 46 H 0.184 0.816 47 H 0.115 0.885 48 H 0.393 0.607 49 H -0.272 1.272 50 H -0.290 1.290 51 H 0.194 0.806 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.305 -1.071 -5.453 5.565 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.098 4.098 2 O -0.220 6.220 3 C 0.122 3.878 4 C 0.052 3.948 5 O -0.204 6.204 6 C -0.051 4.051 7 C 0.301 3.699 8 O -0.448 6.448 9 N -0.351 5.351 10 C 0.010 3.990 11 H 0.107 0.893 12 C -0.149 4.149 13 C -0.133 4.133 14 H 0.101 0.899 15 C 0.014 3.986 16 N -0.169 5.169 17 C -0.040 4.040 18 N -0.314 5.314 19 C -0.120 4.120 20 N -0.173 5.173 21 C -0.176 4.176 22 C -0.129 4.129 23 C -0.130 4.130 24 N 0.549 4.451 25 O -0.396 6.396 26 O -0.380 6.380 27 C -0.042 4.042 28 C -0.199 4.199 29 O -0.343 6.343 30 Si 0.688 3.312 31 C -0.181 4.181 32 H 0.139 0.861 33 H 0.098 0.902 34 H 0.113 0.887 35 H 0.144 0.856 36 H 0.149 0.851 37 H 0.262 0.738 38 H 0.142 0.858 39 H 0.110 0.890 40 H 0.119 0.881 41 H 0.163 0.837 42 H 0.276 0.724 43 H 0.244 0.756 44 H 0.061 0.939 45 H 0.114 0.886 46 H 0.201 0.799 47 H 0.132 0.868 48 H 0.242 0.758 49 H -0.199 1.199 50 H -0.217 1.217 51 H 0.210 0.790 Dipole moment (debyes) X Y Z Total from point charges -1.306 -2.073 -4.291 4.941 hybrid contribution 1.079 1.028 0.443 1.555 sum -0.227 -1.044 -3.849 3.994 Atomic orbital electron populations 1.23815 0.74676 1.07069 1.04210 1.86335 1.24880 1.24549 1.86195 1.18686 0.89185 0.86387 0.93586 1.17979 0.88835 0.85128 1.02814 1.86309 1.18532 1.26850 1.88728 1.22935 0.78791 0.96083 1.07303 1.20399 0.83383 0.90370 0.75755 1.90783 1.64073 1.39949 1.49979 1.45658 1.04988 1.10192 1.74220 1.22521 0.93817 0.84971 0.97651 0.89306 1.23306 0.92409 1.00969 0.98259 1.22502 0.93395 1.00004 0.97379 0.89897 1.22237 0.98239 0.88457 0.89682 1.50785 1.16181 1.29301 1.20682 1.26922 0.92510 0.87346 0.97215 1.70539 1.22784 1.28910 1.09215 1.26423 0.89629 0.94895 1.01053 1.78007 1.20201 1.18679 1.00407 1.23453 0.96861 1.00747 0.96502 1.20901 1.03021 0.88099 1.00865 1.20558 0.92760 0.81943 1.17786 1.43712 1.00823 1.03422 0.97160 1.94499 0.96503 1.94113 1.54478 1.94579 1.64417 1.25393 1.53600 1.20228 0.91089 0.97652 0.95253 1.25757 1.10541 0.92773 0.90822 1.86672 1.87006 1.44594 1.15996 0.94395 0.71864 0.82180 0.82744 1.21081 1.01767 0.88093 1.07192 0.86116 0.90206 0.88748 0.85598 0.85122 0.73819 0.85823 0.89038 0.88063 0.83744 0.72449 0.75565 0.93876 0.88623 0.79886 0.86798 0.75792 1.19871 1.21693 0.78983 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 0.04 9.81 113.37 1.11 1.16 16 2 O -0.31 0.05 10.28 -79.57 -0.82 -0.77 16 3 C 0.17 -0.18 6.70 22.57 0.15 -0.03 16 4 C 0.10 0.05 6.70 22.57 0.15 0.20 16 5 O -0.29 -0.95 9.45 -67.12 -0.63 -1.58 16 6 C 0.03 -0.12 5.22 71.24 0.37 0.25 16 7 C 0.52 0.57 7.91 87.66 0.69 1.26 16 8 O -0.57 -7.47 16.10 16.01 0.26 -7.21 16 9 N -0.70 4.45 5.36 -440.03 -2.36 2.09 16 10 C 0.12 -0.48 4.24 45.52 0.19 -0.29 16 11 H 0.09 0.21 7.46 -2.39 -0.02 0.19 16 12 C -0.11 1.31 7.39 31.12 0.23 1.54 16 13 C -0.11 0.84 3.85 -10.27 -0.04 0.80 16 14 H 0.08 -0.28 8.14 -2.39 -0.02 -0.29 16 15 C 0.13 -1.35 6.39 86.38 0.55 -0.80 16 16 N -0.38 0.57 3.69 -352.05 -1.30 -0.73 16 17 C 0.26 -0.50 12.63 180.36 2.28 1.78 16 18 N -0.59 -3.32 11.19 -204.00 -2.28 -5.60 16 19 C 0.18 0.99 13.03 180.76 2.36 3.34 16 20 N -0.34 -1.93 12.57 -61.24 -0.77 -2.70 16 21 C -0.14 0.39 7.43 31.13 0.23 0.62 16 22 C -0.11 0.10 8.54 22.35 0.19 0.29 16 23 C -0.05 -0.14 6.85 36.38 0.25 0.11 16 24 N 0.04 0.33 4.45 -46.46 -0.21 0.12 16 25 O -0.18 -1.86 18.44 18.88 0.35 -1.51 16 26 O -0.17 -2.09 14.62 25.11 0.37 -1.72 16 27 C -0.04 0.03 5.26 -19.86 -0.10 -0.07 16 28 C -0.09 0.01 1.74 71.24 0.12 0.13 16 29 O -0.54 -0.49 11.79 -129.61 -1.53 -2.02 16 30 Si 0.79 -4.19 29.91 68.60 2.05 -2.14 16 31 C -0.16 0.86 7.64 22.35 0.17 1.03 16 32 H 0.12 -1.36 8.14 -2.39 -0.02 -1.38 16 33 H 0.08 -1.03 7.65 -2.39 -0.02 -1.04 16 34 H 0.09 -1.43 7.68 -2.39 -0.02 -1.45 16 35 H 0.13 -1.31 7.66 -2.39 -0.02 -1.33 16 36 H 0.13 -1.47 7.66 -2.39 -0.02 -1.49 16 37 H 0.42 -6.12 8.73 -92.70 -0.81 -6.93 16 38 H 0.12 -2.15 8.08 -2.38 -0.02 -2.16 16 39 H 0.09 -1.11 8.14 -2.39 -0.02 -1.13 16 40 H 0.10 -1.15 7.84 -2.39 -0.02 -1.17 16 41 H 0.14 -2.55 8.09 -2.39 -0.02 -2.57 16 42 H 0.26 -3.23 8.06 -2.91 -0.02 -3.26 16 43 H 0.23 0.05 8.06 -2.91 -0.02 0.02 16 44 H 0.04 0.20 8.14 -2.39 -0.02 0.18 16 45 H 0.10 -0.44 7.90 -2.39 -0.02 -0.45 16 46 H 0.18 -1.04 5.85 -2.91 -0.02 -1.06 16 47 H 0.11 0.54 6.07 -2.39 -0.01 0.53 16 48 H 0.39 -3.57 8.70 -74.05 -0.64 -4.22 16 49 H -0.27 0.50 7.11 99.48 0.71 1.20 16 50 H -0.29 -0.78 7.11 99.48 0.71 -0.07 16 51 H 0.19 -2.41 3.36 -2.91 -0.01 -2.42 16 Total: 0.00 -44.43 434.82 1.66 -42.76 By element: Atomic # 1 Polarization: -29.93 SS G_CDS: -0.37 Total: -30.30 kcal Atomic # 6 Polarization: 2.41 SS G_CDS: 8.91 Total: 11.32 kcal Atomic # 7 Polarization: 0.09 SS G_CDS: -6.92 Total: -6.82 kcal Atomic # 8 Polarization: -12.81 SS G_CDS: -2.01 Total: -14.82 kcal Atomic # 14 Polarization: -4.19 SS G_CDS: 2.05 Total: -2.14 kcal Total: -44.43 1.66 -42.76 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14644236_4549636.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 70.271 kcal (2) G-P(sol) polarization free energy of solvation -44.426 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 25.845 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.664 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.762 kcal (6) G-S(sol) free energy of system = (1) + (5) 27.509 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.05 seconds