Wall clock time and date at job start Sun Mar 7 2021 00:09:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86305 * 109.46874 * 2 1 4 4 C 1.50696 * 109.47485 * 239.99576 * 2 1 3 5 5 C 1.38249 * 119.94386 * 120.25347 * 4 2 1 6 6 C 1.38161 * 120.05751 * 180.21390 * 5 4 2 7 7 C 1.38714 * 119.94312 * 359.50846 * 6 5 4 8 8 O 1.35892 * 120.05889 * 180.27992 * 7 6 5 9 9 C 1.42901 * 116.99992 * 359.97438 * 8 7 6 10 10 C 1.50701 * 109.47504 * 180.02562 * 9 8 7 11 11 O 1.21284 * 119.99875 * 359.97438 * 10 9 8 12 12 N 1.34775 * 120.00095 * 180.02562 * 10 9 8 13 13 C 1.46504 * 119.99912 * 180.02562 * 12 10 9 14 14 H 1.09000 * 112.84565 * 334.65537 * 13 12 10 15 15 C 1.53774 * 113.61849 * 105.85483 * 13 12 10 16 16 C 1.53952 * 87.01930 * 139.95083 * 15 13 12 17 17 H 1.08999 * 113.61274 * 89.19817 * 16 15 13 18 18 C 1.53004 * 113.66775 * 220.06942 * 16 15 13 19 19 N 1.46504 * 109.46946 * 272.56003 * 18 16 15 20 20 C 1.34424 * 126.81905 * 124.71075 * 19 18 16 21 21 N 1.30832 * 108.07470 * 179.89169 * 20 19 18 22 22 C 1.33241 * 109.83167 * 0.37950 * 21 20 19 23 23 N 1.30722 * 108.94432 * 359.76683 * 22 21 20 24 24 C 1.53778 * 113.61119 * 203.46922 * 13 12 10 25 25 C 1.38760 * 119.88696 * 0.25907 * 7 6 5 26 26 N 1.48002 * 120.02814 * 180.02562 * 25 7 6 27 27 O 1.21798 * 119.99928 * 179.97438 * 26 25 7 28 28 O 1.21805 * 119.99921 * 0.02562 * 26 25 7 29 29 C 1.38123 * 119.94204 * 359.97438 * 25 7 6 30 30 H 0.96694 * 114.00537 * 300.00011 * 1 2 3 31 31 H 1.09000 * 109.46996 * 119.99216 * 2 1 3 32 32 H 1.48497 * 109.99931 * 178.68150 * 3 2 1 33 33 H 1.48499 * 109.99558 * 299.99657 * 3 2 1 34 34 H 1.07998 * 119.96910 * 359.97438 * 5 4 2 35 35 H 1.08002 * 120.03267 * 179.79329 * 6 5 4 36 36 H 1.08998 * 109.47276 * 300.00247 * 9 8 7 37 37 H 1.08998 * 109.47191 * 60.00113 * 9 8 7 38 38 H 0.96995 * 120.00315 * 359.97438 * 12 10 9 39 39 H 1.08995 * 113.62036 * 254.53389 * 15 13 12 40 40 H 1.09005 * 113.61531 * 25.43594 * 15 13 12 41 41 H 1.08991 * 109.47344 * 32.56313 * 18 16 15 42 42 H 1.09004 * 109.47057 * 152.55980 * 18 16 15 43 43 H 1.07994 * 125.96510 * 0.03858 * 20 19 18 44 44 H 1.07994 * 125.53334 * 179.79379 * 22 21 20 45 45 H 1.08999 * 113.61603 * 334.55824 * 24 13 12 46 46 H 1.09000 * 113.61872 * 105.38720 * 24 13 12 47 47 H 1.08006 * 119.96964 * 180.02562 * 29 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7105 -1.2303 5 6 2.7305 -0.0391 -2.1370 6 6 3.1887 -0.6868 -3.2680 7 6 2.8548 -2.0150 -3.4883 8 8 3.3090 -2.6561 -4.5971 9 6 4.1257 -1.9010 -5.4943 10 6 4.5316 -2.7701 -6.6566 11 8 4.1585 -3.9229 -6.7111 12 7 5.3099 -2.2667 -7.6350 13 6 5.7039 -3.1115 -8.7653 14 1 5.7042 -4.1736 -8.5199 15 6 4.9605 -2.7810 -10.0701 16 6 6.3008 -3.0004 -10.7950 17 1 6.4649 -4.0319 -11.1066 18 6 6.5656 -1.9920 -11.9149 19 7 5.9715 -2.4801 -13.1620 20 6 5.0901 -1.8313 -13.9424 21 7 4.8062 -2.6014 -14.9612 22 6 5.4776 -3.7480 -14.8620 23 7 6.2052 -3.7212 -13.7763 24 6 6.9887 -2.6412 -9.4673 25 6 2.0566 -2.6881 -2.5744 26 7 1.6989 -4.1054 -2.8062 27 8 0.9986 -4.6959 -2.0034 28 8 2.1057 -4.6817 -3.7992 29 6 1.5971 -2.0345 -1.4477 30 1 -0.3934 0.4417 0.7650 31 1 1.7923 -0.5137 0.8901 32 1 3.5344 1.7704 0.0321 33 1 1.5614 2.4678 -1.2086 34 1 2.9935 0.9938 -1.9629 35 1 3.8102 -0.1609 -3.9776 36 1 3.5639 -1.0424 -5.8619 37 1 5.0168 -1.5549 -4.9705 38 1 5.6085 -1.3450 -7.5913 39 1 4.1956 -3.5112 -10.3340 40 1 4.6006 -1.7532 -10.1193 41 1 6.1214 -1.0321 -11.6521 42 1 7.6407 -1.8706 -12.0477 43 1 4.6884 -0.8453 -13.7614 44 1 5.4290 -4.5666 -15.5648 45 1 7.1844 -1.5752 -9.3514 46 1 7.8592 -3.2581 -9.2442 47 1 0.9761 -2.5581 -0.7359 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14644236_4549638.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:09:15 Heat of formation + Delta-G solvation = 62.613206 kcal Electronic energy + Delta-G solvation = -34821.319163 eV Core-core repulsion = 29785.649444 eV Total energy + Delta-G solvation = -5035.669719 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 390.146 amu Computer time = 1.43 seconds Orbital eigenvalues (eV) -43.05266 -43.01380 -41.85089 -41.23675 -40.04451 -39.14913 -37.59959 -37.15101 -35.61633 -34.21853 -33.57309 -32.51713 -32.14702 -30.44789 -28.92686 -27.63611 -27.05143 -26.73020 -24.89590 -23.94495 -22.99267 -22.79577 -22.48542 -21.84610 -20.81450 -20.43525 -19.51206 -19.18635 -18.75919 -18.60250 -18.36759 -18.31740 -17.73034 -17.67593 -17.32039 -16.71777 -16.66631 -16.45954 -16.11112 -15.92797 -15.79430 -15.56053 -15.32245 -15.12470 -14.71387 -14.61073 -14.43275 -14.08275 -13.95600 -13.91191 -13.78039 -13.38187 -13.08169 -12.92774 -12.82689 -12.60868 -12.51580 -12.24191 -12.22262 -12.12181 -11.83266 -11.76279 -11.75580 -11.05662 -10.97261 -10.93372 -10.74568 -10.67613 -10.61745 -10.30065 -9.91568 -5.25707 -1.17156 -0.41529 0.34707 0.49768 0.65875 0.96173 1.02117 1.27046 1.31981 1.34553 1.62492 1.88002 2.04558 2.12097 2.84892 2.96418 3.04434 3.07967 3.16920 3.22572 3.30478 3.37983 3.39793 3.46072 3.48785 3.49394 3.59245 3.67797 3.70706 3.86436 3.96833 4.02109 4.10511 4.14089 4.24522 4.27176 4.31207 4.35861 4.46542 4.56663 4.64082 4.67949 4.77716 4.87688 4.96164 5.24464 5.26908 5.40019 5.47255 5.66857 5.79498 6.14799 6.35714 6.91957 6.93857 7.12918 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.545 6.545 2 C -0.071 4.071 3 Si 0.691 3.309 4 C -0.111 4.111 5 C -0.032 4.032 6 C -0.207 4.207 7 C 0.199 3.801 8 O -0.252 6.252 9 C 0.030 3.970 10 C 0.514 3.486 11 O -0.493 6.493 12 N -0.718 5.718 13 C 0.128 3.872 14 H 0.121 0.879 15 C -0.148 4.148 16 C -0.121 4.121 17 H 0.112 0.888 18 C 0.142 3.858 19 N -0.378 5.378 20 C 0.253 3.747 21 N -0.546 5.546 22 C 0.200 3.800 23 N -0.317 5.317 24 C -0.135 4.135 25 C -0.074 4.074 26 N 0.029 4.971 27 O -0.174 6.174 28 O -0.118 6.118 29 C 0.013 3.987 30 H 0.388 0.612 31 H 0.083 0.917 32 H -0.251 1.251 33 H -0.247 1.247 34 H 0.140 0.860 35 H 0.156 0.844 36 H 0.101 0.899 37 H 0.102 0.898 38 H 0.402 0.598 39 H 0.076 0.924 40 H 0.087 0.913 41 H 0.102 0.898 42 H 0.093 0.907 43 H 0.217 0.783 44 H 0.217 0.783 45 H 0.092 0.908 46 H 0.085 0.915 47 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.504 12.922 4.598 14.437 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.181 4.181 3 Si 0.591 3.409 4 C -0.112 4.112 5 C -0.050 4.050 6 C -0.227 4.227 7 C 0.150 3.850 8 O -0.162 6.162 9 C -0.049 4.049 10 C 0.298 3.702 11 O -0.364 6.364 12 N -0.372 5.372 13 C 0.024 3.976 14 H 0.138 0.862 15 C -0.187 4.187 16 C -0.141 4.141 17 H 0.130 0.870 18 C 0.020 3.980 19 N -0.169 5.169 20 C -0.044 4.044 21 N -0.273 5.273 22 C -0.103 4.103 23 N -0.145 5.145 24 C -0.174 4.174 25 C -0.158 4.158 26 N 0.549 4.451 27 O -0.383 6.383 28 O -0.341 6.341 29 C -0.006 4.006 30 H 0.237 0.763 31 H 0.101 0.899 32 H -0.176 1.176 33 H -0.172 1.172 34 H 0.157 0.843 35 H 0.174 0.826 36 H 0.119 0.881 37 H 0.120 0.880 38 H 0.236 0.764 39 H 0.095 0.905 40 H 0.106 0.894 41 H 0.120 0.880 42 H 0.111 0.889 43 H 0.233 0.767 44 H 0.234 0.766 45 H 0.110 0.890 46 H 0.104 0.896 47 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges 5.188 12.327 3.712 13.880 hybrid contribution 0.147 0.110 -0.096 0.208 sum 5.336 12.437 3.616 14.008 Atomic orbital electron populations 1.86487 1.16654 1.82002 1.50044 1.24643 0.86316 1.10650 0.96518 0.94634 0.80639 0.77582 0.88020 1.19247 1.00987 0.93231 0.97754 1.21110 0.92914 0.99302 0.91628 1.21192 1.07236 0.92804 1.01425 1.18643 0.90065 0.90666 0.85673 1.86504 1.62827 1.37371 1.29466 1.22743 0.96338 0.94964 0.90827 1.19853 0.79299 0.88160 0.82887 1.90876 1.51933 1.17085 1.76541 1.45766 1.52741 1.15722 1.22988 1.22502 0.94660 0.96997 0.83447 0.86155 1.23624 0.97042 1.02797 0.95227 1.22738 0.97393 1.01179 0.92754 0.87033 1.21848 0.99775 0.96973 0.79444 1.50551 1.33719 1.12529 1.20148 1.26088 0.90843 0.99762 0.87720 1.70566 1.28038 1.04441 1.24281 1.26071 0.92477 0.96641 0.95117 1.78047 1.25169 0.99990 1.11271 1.23367 0.97561 1.02542 0.93933 1.20579 1.10388 0.84146 1.00684 1.43305 0.99207 1.02190 1.00372 1.94552 1.35160 1.66618 1.42006 1.94699 1.54660 1.67478 1.17303 1.20814 0.93052 0.93471 0.93229 0.76349 0.89919 1.17608 1.17180 0.84263 0.82644 0.88093 0.88042 0.76354 0.90503 0.89410 0.87955 0.88864 0.76658 0.76620 0.88976 0.89644 0.81594 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 1.01 12.74 -35.23 -0.45 0.57 16 2 C -0.07 0.18 2.81 36.00 0.10 0.28 16 3 Si 0.69 -2.77 29.78 -169.99 -5.06 -7.83 16 4 C -0.11 0.02 5.42 -104.60 -0.57 -0.55 16 5 C -0.03 0.04 8.66 -39.61 -0.34 -0.30 16 6 C -0.21 0.36 9.04 -39.43 -0.36 0.00 16 7 C 0.20 0.34 6.67 -39.21 -0.26 0.08 16 8 O -0.25 -0.68 7.68 -49.75 -0.38 -1.06 16 9 C 0.03 -0.07 5.22 36.01 0.19 0.12 16 10 C 0.51 0.17 7.91 -10.99 -0.09 0.08 16 11 O -0.49 -3.03 16.12 -14.35 -0.23 -3.26 16 12 N -0.72 2.44 5.36 -53.02 -0.28 2.16 16 13 C 0.13 -0.31 4.21 -67.12 -0.28 -0.59 16 14 H 0.12 0.03 7.50 -51.93 -0.39 -0.36 16 15 C -0.15 0.39 7.45 -25.83 -0.19 0.20 16 16 C -0.12 0.39 3.88 -89.71 -0.35 0.05 16 17 H 0.11 -0.09 8.00 -51.93 -0.42 -0.51 16 18 C 0.14 -0.56 6.39 -4.04 -0.03 -0.58 16 19 N -0.38 0.09 3.69 -62.63 -0.23 -0.14 16 20 C 0.25 -0.07 12.63 -90.66 -1.14 -1.22 16 21 N -0.55 -1.54 11.19 -15.83 -0.18 -1.71 16 22 C 0.20 0.45 13.03 -91.81 -1.20 -0.75 16 23 N -0.32 -0.82 12.45 29.29 0.36 -0.46 16 24 C -0.14 0.66 7.39 -25.92 -0.19 0.46 16 25 C -0.07 -0.27 6.87 -79.80 -0.55 -0.82 16 26 N 0.03 0.20 4.45 34.03 0.15 0.36 16 27 O -0.17 -1.32 18.45 -29.46 -0.54 -1.86 16 28 O -0.12 -1.06 17.24 -36.49 -0.63 -1.69 16 29 C 0.01 0.02 9.12 -39.61 -0.36 -0.34 16 30 H 0.39 -2.64 8.74 45.56 0.40 -2.24 16 31 H 0.08 -0.35 7.96 -51.93 -0.41 -0.76 16 32 H -0.25 0.53 7.11 56.52 0.40 0.93 16 33 H -0.25 0.29 7.11 56.52 0.40 0.70 16 34 H 0.14 -0.42 4.87 -52.49 -0.26 -0.68 16 35 H 0.16 -0.87 6.30 -52.49 -0.33 -1.20 16 36 H 0.10 -0.55 7.66 -51.93 -0.40 -0.95 16 37 H 0.10 -0.57 7.66 -51.93 -0.40 -0.97 16 38 H 0.40 -2.86 8.71 -40.82 -0.36 -3.22 16 39 H 0.08 0.00 8.14 -51.93 -0.42 -0.43 16 40 H 0.09 -0.37 7.90 -51.93 -0.41 -0.78 16 41 H 0.10 -0.70 7.79 -51.93 -0.40 -1.11 16 42 H 0.09 -0.40 8.14 -51.93 -0.42 -0.83 16 43 H 0.22 -1.03 8.06 -52.49 -0.42 -1.45 16 44 H 0.22 -0.16 8.06 -52.49 -0.42 -0.58 16 45 H 0.09 -0.64 8.07 -51.93 -0.42 -1.06 16 46 H 0.08 -0.37 8.14 -51.93 -0.42 -0.79 16 47 H 0.17 0.18 7.61 -52.48 -0.40 -0.22 16 LS Contribution 409.39 15.07 6.17 6.17 Total: 0.00 -16.71 409.39 -12.42 -29.13 By element: Atomic # 1 Polarization: -10.99 SS G_CDS: -5.50 Total: -16.49 kcal Atomic # 6 Polarization: 1.74 SS G_CDS: -5.62 Total: -3.88 kcal Atomic # 7 Polarization: 0.38 SS G_CDS: -0.18 Total: 0.20 kcal Atomic # 8 Polarization: -5.07 SS G_CDS: -2.24 Total: -7.31 kcal Atomic # 14 Polarization: -2.77 SS G_CDS: -5.06 Total: -7.83 kcal Total LS contribution 6.17 Total: 6.17 kcal Total: -16.71 -12.42 -29.13 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14644236_4549638.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 91.748 kcal (2) G-P(sol) polarization free energy of solvation -16.710 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 75.038 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.424 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.135 kcal (6) G-S(sol) free energy of system = (1) + (5) 62.613 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.43 seconds