Wall clock time and date at job start Sun Mar 7 2021 00:09:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86305 * 109.46874 * 2 1 4 4 C 1.50696 * 109.47485 * 239.99576 * 2 1 3 5 5 C 1.38249 * 119.94386 * 120.25347 * 4 2 1 6 6 C 1.38161 * 120.05751 * 180.21390 * 5 4 2 7 7 C 1.38714 * 119.94312 * 359.50846 * 6 5 4 8 8 O 1.35892 * 120.05889 * 180.27992 * 7 6 5 9 9 C 1.42901 * 116.99992 * 359.97438 * 8 7 6 10 10 C 1.50701 * 109.47504 * 180.02562 * 9 8 7 11 11 O 1.21284 * 119.99875 * 359.97438 * 10 9 8 12 12 N 1.34775 * 120.00095 * 180.02562 * 10 9 8 13 13 C 1.46504 * 119.99912 * 180.02562 * 12 10 9 14 14 H 1.09000 * 112.84565 * 334.65537 * 13 12 10 15 15 C 1.53774 * 113.61849 * 105.85483 * 13 12 10 16 16 C 1.53952 * 87.01930 * 139.95083 * 15 13 12 17 17 H 1.08999 * 113.61274 * 89.19817 * 16 15 13 18 18 C 1.53004 * 113.66775 * 220.06942 * 16 15 13 19 19 N 1.46504 * 109.46946 * 272.56003 * 18 16 15 20 20 C 1.34424 * 126.81905 * 124.71075 * 19 18 16 21 21 N 1.30832 * 108.07470 * 179.89169 * 20 19 18 22 22 C 1.33241 * 109.83167 * 0.37950 * 21 20 19 23 23 N 1.30722 * 108.94432 * 359.76683 * 22 21 20 24 24 C 1.53778 * 113.61119 * 203.46922 * 13 12 10 25 25 C 1.38760 * 119.88696 * 0.25907 * 7 6 5 26 26 N 1.48002 * 120.02814 * 180.02562 * 25 7 6 27 27 O 1.21798 * 119.99928 * 179.97438 * 26 25 7 28 28 O 1.21805 * 119.99921 * 0.02562 * 26 25 7 29 29 C 1.38123 * 119.94204 * 359.97438 * 25 7 6 30 30 H 0.96694 * 114.00537 * 300.00011 * 1 2 3 31 31 H 1.09000 * 109.46996 * 119.99216 * 2 1 3 32 32 H 1.48497 * 109.99931 * 178.68150 * 3 2 1 33 33 H 1.48499 * 109.99558 * 299.99657 * 3 2 1 34 34 H 1.07998 * 119.96910 * 359.97438 * 5 4 2 35 35 H 1.08002 * 120.03267 * 179.79329 * 6 5 4 36 36 H 1.08998 * 109.47276 * 300.00247 * 9 8 7 37 37 H 1.08998 * 109.47191 * 60.00113 * 9 8 7 38 38 H 0.96995 * 120.00315 * 359.97438 * 12 10 9 39 39 H 1.08995 * 113.62036 * 254.53389 * 15 13 12 40 40 H 1.09005 * 113.61531 * 25.43594 * 15 13 12 41 41 H 1.08991 * 109.47344 * 32.56313 * 18 16 15 42 42 H 1.09004 * 109.47057 * 152.55980 * 18 16 15 43 43 H 1.07994 * 125.96510 * 0.03858 * 20 19 18 44 44 H 1.07994 * 125.53334 * 179.79379 * 22 21 20 45 45 H 1.08999 * 113.61603 * 334.55824 * 24 13 12 46 46 H 1.09000 * 113.61872 * 105.38720 * 24 13 12 47 47 H 1.08006 * 119.96964 * 180.02562 * 29 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7105 -1.2303 5 6 2.7305 -0.0391 -2.1370 6 6 3.1887 -0.6868 -3.2680 7 6 2.8548 -2.0150 -3.4883 8 8 3.3090 -2.6561 -4.5971 9 6 4.1257 -1.9010 -5.4943 10 6 4.5316 -2.7701 -6.6566 11 8 4.1585 -3.9229 -6.7111 12 7 5.3099 -2.2667 -7.6350 13 6 5.7039 -3.1115 -8.7653 14 1 5.7042 -4.1736 -8.5199 15 6 4.9605 -2.7810 -10.0701 16 6 6.3008 -3.0004 -10.7950 17 1 6.4649 -4.0319 -11.1066 18 6 6.5656 -1.9920 -11.9149 19 7 5.9715 -2.4801 -13.1620 20 6 5.0901 -1.8313 -13.9424 21 7 4.8062 -2.6014 -14.9612 22 6 5.4776 -3.7480 -14.8620 23 7 6.2052 -3.7212 -13.7763 24 6 6.9887 -2.6412 -9.4673 25 6 2.0566 -2.6881 -2.5744 26 7 1.6989 -4.1054 -2.8062 27 8 0.9986 -4.6959 -2.0034 28 8 2.1057 -4.6817 -3.7992 29 6 1.5971 -2.0345 -1.4477 30 1 -0.3934 0.4417 0.7650 31 1 1.7923 -0.5137 0.8901 32 1 3.5344 1.7704 0.0321 33 1 1.5614 2.4678 -1.2086 34 1 2.9935 0.9938 -1.9629 35 1 3.8102 -0.1609 -3.9776 36 1 3.5639 -1.0424 -5.8619 37 1 5.0168 -1.5549 -4.9705 38 1 5.6085 -1.3450 -7.5913 39 1 4.1956 -3.5112 -10.3340 40 1 4.6006 -1.7532 -10.1193 41 1 6.1214 -1.0321 -11.6521 42 1 7.6407 -1.8706 -12.0477 43 1 4.6884 -0.8453 -13.7614 44 1 5.4290 -4.5666 -15.5648 45 1 7.1844 -1.5752 -9.3514 46 1 7.8592 -3.2581 -9.2442 47 1 0.9761 -2.5581 -0.7359 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14644236_4549638.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:09:13 Heat of formation + Delta-G solvation = 57.151777 kcal Electronic energy + Delta-G solvation = -34821.555989 eV Core-core repulsion = 29785.649444 eV Total energy + Delta-G solvation = -5035.906545 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 390.146 amu Computer time = 1.64 seconds Orbital eigenvalues (eV) -43.39111 -42.99752 -41.90924 -41.17161 -39.95312 -39.12747 -37.66501 -37.40554 -35.54138 -34.16092 -33.62531 -32.44304 -32.17977 -30.31996 -28.75326 -27.92808 -26.79212 -26.59850 -24.81011 -23.98025 -22.95664 -22.86941 -22.41757 -21.77438 -20.62974 -20.51047 -19.87706 -19.27093 -18.75515 -18.63923 -18.40187 -18.23946 -17.68786 -17.61013 -17.19115 -16.63003 -16.55577 -16.31414 -15.99653 -15.87179 -15.80847 -15.45046 -15.22605 -15.05367 -14.59430 -14.49460 -14.25417 -13.96565 -13.85468 -13.71323 -13.49633 -13.24515 -13.04497 -12.78581 -12.77665 -12.68757 -12.48571 -12.39327 -12.34305 -12.22819 -11.97380 -11.90909 -11.56998 -11.10434 -10.99032 -10.98144 -10.80885 -10.53876 -10.43371 -10.18363 -9.85522 -4.88998 -1.42636 -0.36968 0.03412 0.24111 0.69007 1.11865 1.27266 1.36107 1.45775 1.68287 1.89198 1.91886 1.99834 2.25072 2.96884 3.06995 3.23546 3.32607 3.42142 3.44250 3.47579 3.50751 3.52659 3.56088 3.70885 3.80309 3.87109 3.92440 3.92716 4.11717 4.13631 4.15901 4.22903 4.37102 4.39403 4.48421 4.50327 4.65542 4.68597 4.70912 4.76134 4.89530 4.94238 4.99867 5.09285 5.13464 5.30018 5.43685 5.47233 5.63707 5.95273 6.35306 6.39908 6.85558 7.10446 7.12051 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.568 6.568 2 C -0.089 4.089 3 Si 0.779 3.221 4 C -0.117 4.117 5 C -0.026 4.026 6 C -0.188 4.188 7 C 0.193 3.807 8 O -0.289 6.289 9 C 0.023 3.977 10 C 0.507 3.493 11 O -0.568 6.568 12 N -0.693 5.693 13 C 0.117 3.883 14 H 0.080 0.920 15 C -0.143 4.143 16 C -0.118 4.118 17 H 0.076 0.924 18 C 0.136 3.864 19 N -0.378 5.378 20 C 0.257 3.743 21 N -0.587 5.587 22 C 0.185 3.815 23 N -0.352 5.352 24 C -0.111 4.111 25 C -0.101 4.101 26 N 0.034 4.966 27 O -0.190 6.190 28 O -0.175 6.175 29 C 0.001 3.999 30 H 0.407 0.593 31 H 0.098 0.902 32 H -0.269 1.269 33 H -0.281 1.281 34 H 0.164 0.836 35 H 0.205 0.795 36 H 0.143 0.857 37 H 0.145 0.855 38 H 0.426 0.574 39 H 0.039 0.961 40 H 0.116 0.884 41 H 0.146 0.854 42 H 0.102 0.898 43 H 0.260 0.740 44 H 0.230 0.770 45 H 0.132 0.868 46 H 0.081 0.919 47 H 0.160 0.840 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.053 18.438 5.573 20.190 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.379 6.379 2 C -0.197 4.197 3 Si 0.681 3.319 4 C -0.118 4.118 5 C -0.044 4.044 6 C -0.206 4.206 7 C 0.144 3.856 8 O -0.199 6.199 9 C -0.054 4.054 10 C 0.293 3.707 11 O -0.446 6.446 12 N -0.348 5.348 13 C 0.012 3.988 14 H 0.098 0.902 15 C -0.181 4.181 16 C -0.138 4.138 17 H 0.095 0.905 18 C 0.016 3.984 19 N -0.168 5.168 20 C -0.039 4.039 21 N -0.315 5.315 22 C -0.117 4.117 23 N -0.181 5.181 24 C -0.149 4.149 25 C -0.187 4.187 26 N 0.545 4.455 27 O -0.400 6.400 28 O -0.388 6.388 29 C -0.018 4.018 30 H 0.259 0.741 31 H 0.116 0.884 32 H -0.195 1.195 33 H -0.208 1.208 34 H 0.181 0.819 35 H 0.222 0.778 36 H 0.160 0.840 37 H 0.162 0.838 38 H 0.265 0.735 39 H 0.058 0.942 40 H 0.135 0.865 41 H 0.164 0.836 42 H 0.120 0.880 43 H 0.276 0.724 44 H 0.246 0.754 45 H 0.150 0.850 46 H 0.099 0.901 47 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges 6.785 17.847 4.658 19.653 hybrid contribution -0.342 -1.471 -0.327 1.545 sum 6.443 16.376 4.332 18.124 Atomic orbital electron populations 1.86441 1.17142 1.82713 1.51594 1.25040 0.86218 1.12437 0.96001 0.93405 0.78111 0.74232 0.86137 1.19698 1.00776 0.92403 0.98962 1.21500 0.91617 1.00207 0.91077 1.21693 1.06215 0.90912 1.01805 1.18863 0.89849 0.91737 0.85200 1.86478 1.63658 1.39562 1.30239 1.23164 0.98103 0.94597 0.89559 1.20528 0.78666 0.87569 0.83919 1.90859 1.55005 1.20404 1.78288 1.45566 1.51100 1.16582 1.21515 1.22402 0.96872 0.95563 0.83971 0.90194 1.23624 0.96336 1.03247 0.94922 1.22565 0.97359 0.99886 0.94013 0.90543 1.22238 1.00693 0.98037 0.77427 1.50757 1.33613 1.11562 1.20897 1.26896 0.89803 1.00628 0.86588 1.70535 1.29410 1.05196 1.26320 1.26424 0.92575 0.97249 0.95470 1.77960 1.26160 1.02112 1.11820 1.23303 0.95644 1.04669 0.91296 1.20886 1.13001 0.81839 1.02928 1.43813 0.98329 1.03756 0.99561 1.94494 1.35537 1.68090 1.41916 1.94688 1.56441 1.69158 1.18465 1.20888 0.93648 0.94471 0.92758 0.74074 0.88420 1.19516 1.20795 0.81915 0.77825 0.83978 0.83795 0.73467 0.94232 0.86538 0.83618 0.87953 0.72404 0.75426 0.84986 0.90055 0.82207 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 2.56 12.74 -148.98 -1.90 0.66 16 2 C -0.09 0.58 2.81 71.23 0.20 0.78 16 3 Si 0.78 -8.21 29.78 68.60 2.04 -6.17 16 4 C -0.12 0.16 5.42 -19.85 -0.11 0.05 16 5 C -0.03 0.14 8.66 22.25 0.19 0.34 16 6 C -0.19 1.22 9.04 22.37 0.20 1.42 16 7 C 0.19 0.63 6.67 22.51 0.15 0.78 16 8 O -0.29 -1.77 7.68 -63.32 -0.49 -2.26 16 9 C 0.02 -0.15 5.22 71.24 0.37 0.22 16 10 C 0.51 0.53 7.91 87.66 0.69 1.23 16 11 O -0.57 -9.00 16.12 15.99 0.26 -8.74 16 12 N -0.69 5.58 5.36 -440.04 -2.36 3.22 16 13 C 0.12 -0.50 4.21 45.51 0.19 -0.30 16 14 H 0.08 0.35 7.50 -2.39 -0.02 0.33 16 15 C -0.14 0.72 7.45 31.18 0.23 0.96 16 16 C -0.12 0.77 3.88 -10.21 -0.04 0.73 16 17 H 0.08 0.07 8.00 -2.39 -0.02 0.05 16 18 C 0.14 -1.35 6.39 86.38 0.55 -0.79 16 19 N -0.38 0.35 3.69 -352.06 -1.30 -0.95 16 20 C 0.26 -0.41 12.63 180.36 2.28 1.87 16 21 N -0.59 -3.65 11.19 -204.01 -2.28 -5.93 16 22 C 0.19 1.14 13.03 180.76 2.36 3.49 16 23 N -0.35 -2.33 12.45 -61.24 -0.76 -3.09 16 24 C -0.11 1.24 7.39 31.12 0.23 1.47 16 25 C -0.10 -0.94 6.87 36.48 0.25 -0.69 16 26 N 0.03 0.61 4.45 -46.24 -0.21 0.40 16 27 O -0.19 -3.62 18.45 18.89 0.35 -3.27 16 28 O -0.17 -3.99 17.24 25.60 0.44 -3.55 16 29 C 0.00 0.01 9.12 22.25 0.20 0.21 16 30 H 0.41 -5.99 8.74 -74.06 -0.65 -6.64 16 31 H 0.10 -0.96 7.96 -2.39 -0.02 -0.98 16 32 H -0.27 1.99 7.11 99.48 0.71 2.70 16 33 H -0.28 1.34 7.11 99.48 0.71 2.04 16 34 H 0.16 -1.63 4.87 -2.91 -0.01 -1.65 16 35 H 0.20 -3.47 6.30 -2.91 -0.02 -3.48 16 36 H 0.14 -2.15 7.66 -2.39 -0.02 -2.16 16 37 H 0.14 -2.22 7.66 -2.39 -0.02 -2.24 16 38 H 0.43 -7.70 8.71 -92.71 -0.81 -8.51 16 39 H 0.04 0.11 8.14 -2.39 -0.02 0.09 16 40 H 0.12 -1.28 7.90 -2.38 -0.02 -1.29 16 41 H 0.15 -2.69 7.79 -2.39 -0.02 -2.71 16 42 H 0.10 -1.13 8.14 -2.38 -0.02 -1.15 16 43 H 0.26 -3.23 8.06 -2.91 -0.02 -3.26 16 44 H 0.23 0.17 8.06 -2.91 -0.02 0.15 16 45 H 0.13 -2.48 8.07 -2.39 -0.02 -2.50 16 46 H 0.08 -0.76 8.14 -2.39 -0.02 -0.78 16 47 H 0.16 0.72 7.61 -2.91 -0.02 0.70 16 Total: 0.00 -50.60 409.39 1.40 -49.20 By element: Atomic # 1 Polarization: -30.93 SS G_CDS: -0.35 Total: -31.28 kcal Atomic # 6 Polarization: 3.81 SS G_CDS: 7.95 Total: 11.77 kcal Atomic # 7 Polarization: 0.56 SS G_CDS: -6.91 Total: -6.35 kcal Atomic # 8 Polarization: -15.83 SS G_CDS: -1.34 Total: -17.17 kcal Atomic # 14 Polarization: -8.21 SS G_CDS: 2.04 Total: -6.17 kcal Total: -50.60 1.40 -49.20 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14644236_4549638.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 106.347 kcal (2) G-P(sol) polarization free energy of solvation -50.596 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 55.751 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.400 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -49.195 kcal (6) G-S(sol) free energy of system = (1) + (5) 57.152 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.64 seconds