Wall clock time and date at job start Sun Mar 7 2021 00:09:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.47149 * 2 1 4 4 C 1.50701 * 109.46932 * 240.00215 * 2 1 3 5 5 C 1.38265 * 119.94603 * 300.00361 * 4 2 1 6 6 C 1.38139 * 120.05729 * 180.02562 * 5 4 2 7 7 C 1.38743 * 119.94274 * 359.97438 * 6 5 4 8 8 O 1.35901 * 120.05417 * 180.02562 * 7 6 5 9 9 C 1.42895 * 116.99884 * 179.97438 * 8 7 6 10 10 F 1.39897 * 109.47218 * 60.00114 * 9 8 7 11 11 F 1.39899 * 109.47172 * 299.99919 * 9 8 7 12 12 C 1.50703 * 109.47034 * 180.02562 * 9 8 7 13 13 O 1.21278 * 120.00183 * 0.02562 * 12 9 8 14 14 N 1.34783 * 119.99755 * 179.97438 * 12 9 8 15 15 C 1.46499 * 119.99531 * 180.02562 * 14 12 9 16 16 H 1.08996 * 112.85385 * 23.80181 * 15 14 12 17 17 C 1.53781 * 113.61225 * 155.00207 * 15 14 12 18 18 C 1.53786 * 87.17350 * 139.93836 * 17 15 14 19 19 H 1.08993 * 113.61491 * 89.15923 * 18 17 15 20 20 C 1.52999 * 113.61361 * 220.06273 * 18 17 15 21 21 N 1.46494 * 109.47391 * 184.99937 * 20 18 17 22 22 C 1.34428 * 126.82680 * 124.99556 * 21 20 18 23 23 N 1.30831 * 108.07865 * 179.97438 * 22 21 20 24 24 C 1.33246 * 109.83032 * 0.02562 * 23 22 21 25 25 N 1.30712 * 108.94440 * 359.74908 * 24 23 22 26 26 C 1.53782 * 113.61191 * 252.49880 * 15 14 12 27 27 C 1.38726 * 119.88792 * 0.27489 * 7 6 5 28 28 C 1.38151 * 119.94414 * 359.47130 * 27 7 6 29 29 H 0.96702 * 113.99910 * 59.99637 * 1 2 3 30 30 H 1.08994 * 109.47140 * 120.00278 * 2 1 3 31 31 H 1.48494 * 110.00339 * 298.68484 * 3 2 1 32 32 H 1.48506 * 109.99809 * 60.00533 * 3 2 1 33 33 H 1.07994 * 119.96970 * 359.97067 * 5 4 2 34 34 H 1.08002 * 120.03129 * 179.97438 * 6 5 4 35 35 H 0.96997 * 119.99692 * 0.02562 * 14 12 9 36 36 H 1.09002 * 113.61445 * 254.52836 * 17 15 14 37 37 H 1.09002 * 113.61408 * 25.34566 * 17 15 14 38 38 H 1.09002 * 109.47053 * 305.00261 * 20 18 17 39 39 H 1.09004 * 109.47121 * 64.99898 * 20 18 17 40 40 H 1.07992 * 125.95920 * 0.02562 * 22 21 20 41 41 H 1.07997 * 125.52864 * 180.02562 * 24 23 22 42 42 H 1.08997 * 113.61668 * 334.56642 * 26 15 14 43 43 H 1.08998 * 113.61674 * 105.39151 * 26 15 14 44 44 H 1.08003 * 120.02701 * 179.72713 * 27 7 6 45 45 H 1.07996 * 119.97171 * 180.22644 * 28 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.5965 -2.0341 -1.4483 6 6 2.0561 -2.6876 -2.5752 7 6 2.8539 -2.0144 -3.4891 8 8 3.3068 -2.6551 -4.5988 9 6 4.1228 -1.8997 -5.4963 10 9 5.2672 -1.4561 -4.8249 11 9 3.4015 -0.7972 -5.9668 12 6 4.5273 -2.7683 -6.6595 13 8 4.1531 -3.9206 -6.7147 14 7 5.3040 -2.2642 -7.6389 15 6 5.6966 -3.1085 -8.7699 16 1 5.0097 -3.9380 -8.9376 17 6 6.0274 -2.3152 -10.0451 18 6 7.1897 -3.2982 -10.2637 19 1 6.9128 -4.1804 -10.8407 20 6 8.4691 -2.6311 -10.7726 21 7 9.4733 -3.6577 -11.0619 22 6 10.1250 -3.8428 -12.2230 23 7 10.9359 -4.8589 -12.0759 24 6 10.8301 -5.3465 -10.8404 25 7 9.9503 -4.6409 -10.1796 26 6 7.1760 -3.5276 -8.7413 27 6 3.1926 -0.6879 -3.2657 28 6 2.7261 -0.0372 -2.1399 29 1 -0.3933 0.4418 -0.7650 30 1 1.7923 -0.5138 0.8899 31 1 1.5879 2.4586 -1.2241 32 1 1.5616 2.4678 1.2086 33 1 0.9759 -2.5578 -0.7363 34 1 1.7947 -3.7217 -2.7447 35 1 5.6029 -1.3425 -7.5948 36 1 5.2538 -2.3766 -10.8106 37 1 6.3510 -1.2925 -9.8515 38 1 8.2498 -2.0709 -11.6816 39 1 8.8526 -1.9521 -10.0110 40 1 10.0014 -3.2548 -13.1204 41 1 11.3848 -6.1856 -10.4472 42 1 7.8150 -2.8369 -8.1912 43 1 7.3297 -4.5675 -8.4529 44 1 3.8171 -0.1630 -3.9735 45 1 2.9866 0.9966 -1.9674 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14644236_4549640.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:09:19 Heat of formation + Delta-G solvation = -40.056136 kcal Electronic energy + Delta-G solvation = -34126.822475 eV Core-core repulsion = 28978.809163 eV Total energy + Delta-G solvation = -5148.013312 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.133 amu Computer time = 1.27 seconds Orbital eigenvalues (eV) -50.84524 -48.82080 -43.02982 -41.60779 -41.28499 -39.95589 -39.18356 -37.35517 -35.81318 -34.31851 -32.43289 -32.16120 -32.01269 -29.82128 -28.60228 -27.06781 -26.38580 -25.00195 -24.17930 -22.94041 -22.88229 -22.51045 -22.13045 -21.27220 -20.50785 -19.72440 -19.62825 -18.61900 -18.49959 -17.81458 -17.44469 -17.07314 -16.93631 -16.63334 -16.41653 -16.26499 -16.21444 -15.86535 -15.77785 -15.70825 -15.40804 -15.30478 -15.18772 -15.07041 -15.06071 -14.72862 -14.37327 -14.35226 -14.17182 -14.03456 -13.79126 -13.50871 -13.43182 -13.09118 -12.99496 -12.54608 -12.38055 -12.25295 -12.23484 -11.74577 -11.71253 -11.46660 -10.96213 -10.77017 -10.68477 -10.66520 -10.55271 -10.16386 -9.54540 -5.00783 0.05802 0.17580 0.48175 0.64903 0.68126 1.23416 1.25791 1.54890 1.73978 1.92232 2.01001 2.03111 2.47947 2.70632 2.95259 3.08057 3.24671 3.31315 3.32799 3.36319 3.41840 3.53147 3.63966 3.69930 3.72312 3.84284 3.92905 3.96797 4.09304 4.20353 4.29813 4.32723 4.39076 4.40324 4.40798 4.53107 4.58064 4.73635 4.81496 4.85431 4.92989 5.06774 5.10484 5.26220 5.35585 5.39989 5.45720 5.74057 5.77688 5.87455 6.35662 6.37607 7.11578 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.529 6.529 2 C -0.071 4.071 3 Si 0.681 3.319 4 C -0.141 4.141 5 C -0.056 4.056 6 C -0.126 4.126 7 C 0.107 3.893 8 O -0.286 6.286 9 C 0.431 3.569 10 F -0.174 7.174 11 F -0.175 7.175 12 C 0.517 3.483 13 O -0.466 6.466 14 N -0.694 5.694 15 C 0.120 3.880 16 H 0.125 0.875 17 C -0.135 4.135 18 C -0.118 4.118 19 H 0.104 0.896 20 C 0.141 3.859 21 N -0.380 5.380 22 C 0.253 3.747 23 N -0.546 5.546 24 C 0.198 3.802 25 N -0.313 5.313 26 C -0.135 4.135 27 C -0.187 4.187 28 C -0.077 4.077 29 H 0.376 0.624 30 H 0.121 0.879 31 H -0.260 1.260 32 H -0.255 1.255 33 H 0.140 0.860 34 H 0.141 0.859 35 H 0.410 0.590 36 H 0.087 0.913 37 H 0.096 0.904 38 H 0.106 0.894 39 H 0.092 0.908 40 H 0.218 0.782 41 H 0.217 0.783 42 H 0.091 0.909 43 H 0.083 0.917 44 H 0.136 0.864 45 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.929 5.015 -3.364 6.339 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.181 4.181 3 Si 0.583 3.417 4 C -0.141 4.141 5 C -0.074 4.074 6 C -0.145 4.145 7 C 0.064 3.936 8 O -0.202 6.202 9 C 0.353 3.647 10 F -0.155 7.155 11 F -0.157 7.157 12 C 0.295 3.705 13 O -0.337 6.337 14 N -0.347 5.347 15 C 0.016 3.984 16 H 0.143 0.857 17 C -0.174 4.174 18 C -0.138 4.138 19 H 0.122 0.878 20 C 0.018 3.982 21 N -0.172 5.172 22 C -0.044 4.044 23 N -0.273 5.273 24 C -0.105 4.105 25 N -0.140 5.140 26 C -0.174 4.174 27 C -0.205 4.205 28 C -0.094 4.094 29 H 0.224 0.776 30 H 0.138 0.862 31 H -0.184 1.184 32 H -0.180 1.180 33 H 0.158 0.842 34 H 0.159 0.841 35 H 0.246 0.754 36 H 0.106 0.894 37 H 0.114 0.886 38 H 0.125 0.875 39 H 0.110 0.890 40 H 0.235 0.765 41 H 0.233 0.767 42 H 0.109 0.891 43 H 0.102 0.898 44 H 0.154 0.846 45 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 1.461 4.325 -2.385 5.150 hybrid contribution -0.849 0.866 -0.656 1.378 sum 0.612 5.190 -3.040 6.046 Atomic orbital electron populations 1.86605 1.17629 1.79931 1.49373 1.24985 0.83999 1.10889 0.98260 0.95059 0.91716 0.74547 0.80419 1.20321 1.00682 0.95402 0.97713 1.20894 0.97130 0.93470 0.95871 1.20545 0.99129 1.01267 0.93521 1.18991 0.96408 0.91759 0.86462 1.86675 1.63479 1.38345 1.31734 1.21847 0.76784 0.79433 0.86595 1.93195 1.50851 1.89859 1.81625 1.93192 1.78214 1.55716 1.88555 1.19363 0.80751 0.87652 0.82719 1.90880 1.51943 1.15701 1.75127 1.45804 1.50539 1.16477 1.21915 1.22803 0.96957 0.94650 0.83971 0.85731 1.23401 0.97949 0.98997 0.97031 1.22647 0.93654 0.99788 0.97725 0.87823 1.21846 0.85589 0.87432 1.03292 1.50575 1.31884 1.25282 1.09425 1.26139 0.90564 0.95702 0.92000 1.70573 1.24835 1.11897 1.20018 1.26085 0.96031 0.99891 0.88479 1.78089 1.16613 1.02944 1.16389 1.23528 0.95064 1.03849 0.94929 1.21461 1.04614 0.93571 1.00865 1.20801 0.96203 0.99493 0.92946 0.77586 0.86157 1.18448 1.18009 0.84216 0.84124 0.75390 0.89399 0.88603 0.87538 0.88979 0.76535 0.76690 0.89052 0.89847 0.84644 0.84812 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.49 12.77 -35.23 -0.45 -0.94 16 2 C -0.07 0.04 2.82 36.01 0.10 0.14 16 3 Si 0.68 -0.78 29.78 -169.99 -5.06 -5.84 16 4 C -0.14 -0.02 5.39 -104.60 -0.56 -0.59 16 5 C -0.06 -0.03 9.60 -39.61 -0.38 -0.41 16 6 C -0.13 -0.18 9.99 -39.43 -0.39 -0.58 16 7 C 0.11 0.26 6.48 -39.21 -0.25 0.01 16 8 O -0.29 -0.96 9.60 -39.34 -0.38 -1.34 16 9 C 0.43 0.55 2.05 36.01 0.07 0.63 16 10 F -0.17 -0.10 15.28 2.25 0.03 -0.06 16 11 F -0.18 -0.10 15.31 2.25 0.03 -0.07 16 12 C 0.52 0.64 7.34 -10.98 -0.08 0.56 16 13 O -0.47 -2.22 16.10 -14.35 -0.23 -2.45 16 14 N -0.69 1.64 5.35 -53.02 -0.28 1.36 16 15 C 0.12 -0.34 4.24 -67.12 -0.28 -0.63 16 16 H 0.12 -0.16 7.46 -51.93 -0.39 -0.55 16 17 C -0.14 0.76 7.39 -25.92 -0.19 0.56 16 18 C -0.12 0.50 3.87 -89.71 -0.35 0.15 16 19 H 0.10 -0.31 8.14 -51.93 -0.42 -0.73 16 20 C 0.14 -0.65 6.39 -4.05 -0.03 -0.68 16 21 N -0.38 0.38 3.69 -62.63 -0.23 0.15 16 22 C 0.25 -0.24 12.63 -90.66 -1.14 -1.38 16 23 N -0.55 -1.20 11.19 -15.83 -0.18 -1.38 16 24 C 0.20 0.31 13.03 -91.81 -1.20 -0.88 16 25 N -0.31 -0.55 12.57 29.29 0.37 -0.18 16 26 C -0.14 0.35 7.44 -25.82 -0.19 0.16 16 27 C -0.19 -0.23 8.26 -39.43 -0.33 -0.55 16 28 C -0.08 0.00 8.66 -39.60 -0.34 -0.35 16 29 H 0.38 -0.67 8.70 45.56 0.40 -0.27 16 30 H 0.12 -0.16 7.96 -51.93 -0.41 -0.57 16 31 H -0.26 -0.21 7.11 56.52 0.40 0.19 16 32 H -0.26 -0.55 7.11 56.52 0.40 -0.15 16 33 H 0.14 -0.09 8.06 -52.49 -0.42 -0.51 16 34 H 0.14 0.05 8.06 -52.49 -0.42 -0.37 16 35 H 0.41 -2.04 8.73 -40.82 -0.36 -2.40 16 36 H 0.09 -0.51 8.14 -51.93 -0.42 -0.93 16 37 H 0.10 -0.69 8.08 -51.93 -0.42 -1.11 16 38 H 0.11 -0.79 8.09 -51.93 -0.42 -1.21 16 39 H 0.09 -0.47 7.85 -51.93 -0.41 -0.87 16 40 H 0.22 -1.17 8.06 -52.49 -0.42 -1.59 16 41 H 0.22 -0.27 8.06 -52.49 -0.42 -0.69 16 42 H 0.09 -0.26 7.90 -51.93 -0.41 -0.67 16 43 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 44 H 0.14 0.04 5.10 -52.48 -0.27 -0.23 16 45 H 0.13 -0.26 4.87 -52.49 -0.26 -0.52 16 LS Contribution 392.82 15.07 5.92 5.92 Total: 0.00 -11.20 392.82 -11.10 -22.31 By element: Atomic # 1 Polarization: -8.54 SS G_CDS: -5.10 Total: -13.64 kcal Atomic # 6 Polarization: 1.71 SS G_CDS: -5.55 Total: -3.84 kcal Atomic # 7 Polarization: 0.27 SS G_CDS: -0.32 Total: -0.06 kcal Atomic # 8 Polarization: -3.67 SS G_CDS: -1.06 Total: -4.73 kcal Atomic # 9 Polarization: -0.20 SS G_CDS: 0.07 Total: -0.13 kcal Atomic # 14 Polarization: -0.78 SS G_CDS: -5.06 Total: -5.84 kcal Total LS contribution 5.92 Total: 5.92 kcal Total: -11.20 -11.10 -22.31 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14644236_4549640.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -17.748 kcal (2) G-P(sol) polarization free energy of solvation -11.205 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -28.953 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.103 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.308 kcal (6) G-S(sol) free energy of system = (1) + (5) -40.056 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.27 seconds