Wall clock time and date at job start Sun Mar 7 2021 00:09:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.47149 * 2 1 4 4 C 1.50701 * 109.46932 * 240.00215 * 2 1 3 5 5 C 1.38265 * 119.94603 * 300.00361 * 4 2 1 6 6 C 1.38139 * 120.05729 * 180.02562 * 5 4 2 7 7 C 1.38743 * 119.94274 * 359.97438 * 6 5 4 8 8 O 1.35901 * 120.05417 * 180.02562 * 7 6 5 9 9 C 1.42895 * 116.99884 * 179.97438 * 8 7 6 10 10 F 1.39897 * 109.47218 * 60.00114 * 9 8 7 11 11 F 1.39899 * 109.47172 * 299.99919 * 9 8 7 12 12 C 1.50703 * 109.47034 * 180.02562 * 9 8 7 13 13 O 1.21278 * 120.00183 * 0.02562 * 12 9 8 14 14 N 1.34783 * 119.99755 * 179.97438 * 12 9 8 15 15 C 1.46499 * 119.99531 * 180.02562 * 14 12 9 16 16 H 1.08996 * 112.85385 * 23.80181 * 15 14 12 17 17 C 1.53781 * 113.61225 * 155.00207 * 15 14 12 18 18 C 1.53786 * 87.17350 * 139.93836 * 17 15 14 19 19 H 1.08993 * 113.61491 * 89.15923 * 18 17 15 20 20 C 1.52999 * 113.61361 * 220.06273 * 18 17 15 21 21 N 1.46494 * 109.47391 * 184.99937 * 20 18 17 22 22 C 1.34428 * 126.82680 * 124.99556 * 21 20 18 23 23 N 1.30831 * 108.07865 * 179.97438 * 22 21 20 24 24 C 1.33246 * 109.83032 * 0.02562 * 23 22 21 25 25 N 1.30712 * 108.94440 * 359.74908 * 24 23 22 26 26 C 1.53782 * 113.61191 * 252.49880 * 15 14 12 27 27 C 1.38726 * 119.88792 * 0.27489 * 7 6 5 28 28 C 1.38151 * 119.94414 * 359.47130 * 27 7 6 29 29 H 0.96702 * 113.99910 * 59.99637 * 1 2 3 30 30 H 1.08994 * 109.47140 * 120.00278 * 2 1 3 31 31 H 1.48494 * 110.00339 * 298.68484 * 3 2 1 32 32 H 1.48506 * 109.99809 * 60.00533 * 3 2 1 33 33 H 1.07994 * 119.96970 * 359.97067 * 5 4 2 34 34 H 1.08002 * 120.03129 * 179.97438 * 6 5 4 35 35 H 0.96997 * 119.99692 * 0.02562 * 14 12 9 36 36 H 1.09002 * 113.61445 * 254.52836 * 17 15 14 37 37 H 1.09002 * 113.61408 * 25.34566 * 17 15 14 38 38 H 1.09002 * 109.47053 * 305.00261 * 20 18 17 39 39 H 1.09004 * 109.47121 * 64.99898 * 20 18 17 40 40 H 1.07992 * 125.95920 * 0.02562 * 22 21 20 41 41 H 1.07997 * 125.52864 * 180.02562 * 24 23 22 42 42 H 1.08997 * 113.61668 * 334.56642 * 26 15 14 43 43 H 1.08998 * 113.61674 * 105.39151 * 26 15 14 44 44 H 1.08003 * 120.02701 * 179.72713 * 27 7 6 45 45 H 1.07996 * 119.97171 * 180.22644 * 28 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.5965 -2.0341 -1.4483 6 6 2.0561 -2.6876 -2.5752 7 6 2.8539 -2.0144 -3.4891 8 8 3.3068 -2.6551 -4.5988 9 6 4.1228 -1.8997 -5.4963 10 9 5.2672 -1.4561 -4.8249 11 9 3.4015 -0.7972 -5.9668 12 6 4.5273 -2.7683 -6.6595 13 8 4.1531 -3.9206 -6.7147 14 7 5.3040 -2.2642 -7.6389 15 6 5.6966 -3.1085 -8.7699 16 1 5.0097 -3.9380 -8.9376 17 6 6.0274 -2.3152 -10.0451 18 6 7.1897 -3.2982 -10.2637 19 1 6.9128 -4.1804 -10.8407 20 6 8.4691 -2.6311 -10.7726 21 7 9.4733 -3.6577 -11.0619 22 6 10.1250 -3.8428 -12.2230 23 7 10.9359 -4.8589 -12.0759 24 6 10.8301 -5.3465 -10.8404 25 7 9.9503 -4.6409 -10.1796 26 6 7.1760 -3.5276 -8.7413 27 6 3.1926 -0.6879 -3.2657 28 6 2.7261 -0.0372 -2.1399 29 1 -0.3933 0.4418 -0.7650 30 1 1.7923 -0.5138 0.8899 31 1 1.5879 2.4586 -1.2241 32 1 1.5616 2.4678 1.2086 33 1 0.9759 -2.5578 -0.7363 34 1 1.7947 -3.7217 -2.7447 35 1 5.6029 -1.3425 -7.5948 36 1 5.2538 -2.3766 -10.8106 37 1 6.3510 -1.2925 -9.8515 38 1 8.2498 -2.0709 -11.6816 39 1 8.8526 -1.9521 -10.0110 40 1 10.0014 -3.2548 -13.1204 41 1 11.3848 -6.1856 -10.4472 42 1 7.8150 -2.8369 -8.1912 43 1 7.3297 -4.5675 -8.4529 44 1 3.8171 -0.1630 -3.9735 45 1 2.9866 0.9966 -1.9674 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14644236_4549640.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:09:17 Heat of formation + Delta-G solvation = -39.456304 kcal Electronic energy + Delta-G solvation = -34126.796464 eV Core-core repulsion = 28978.809163 eV Total energy + Delta-G solvation = -5147.987301 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.133 amu Computer time = 1.35 seconds Orbital eigenvalues (eV) -50.91931 -48.88623 -42.95469 -41.60098 -41.31922 -39.88639 -39.23655 -37.39255 -35.73476 -34.23203 -32.47339 -32.13339 -32.05307 -29.75489 -28.52463 -26.77746 -26.39115 -24.95591 -24.14513 -22.89547 -22.83683 -22.52419 -22.08161 -21.09526 -20.53851 -19.72946 -19.68516 -18.63488 -18.35325 -17.81323 -17.45276 -17.01579 -16.82716 -16.59333 -16.46315 -16.24947 -16.13546 -15.88738 -15.78803 -15.64407 -15.43882 -15.38037 -15.17895 -15.13033 -15.00075 -14.53606 -14.42353 -14.41302 -14.24573 -13.78298 -13.55778 -13.49141 -13.26496 -13.05366 -12.94473 -12.44613 -12.34852 -12.26852 -12.00258 -11.77475 -11.58824 -11.40556 -10.95714 -10.76895 -10.66343 -10.56891 -10.45856 -10.20341 -9.61403 -4.93621 -0.00446 0.13843 0.44749 0.59436 0.73425 1.28948 1.48740 1.58493 1.65113 1.94656 1.98209 2.03920 2.43442 2.75749 3.18964 3.27024 3.37366 3.38106 3.52649 3.56496 3.59527 3.63129 3.67059 3.70187 3.91669 4.07507 4.13962 4.15509 4.18927 4.31401 4.38464 4.56022 4.57806 4.60409 4.67657 4.73104 4.81210 4.84439 4.89004 4.96260 5.02515 5.02716 5.31483 5.32380 5.36022 5.40386 5.48006 5.79991 5.84671 5.98337 6.44884 6.46754 7.16550 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.078 4.078 3 Si 0.762 3.238 4 C -0.139 4.139 5 C -0.058 4.058 6 C -0.137 4.137 7 C 0.085 3.915 8 O -0.307 6.307 9 C 0.435 3.565 10 F -0.169 7.169 11 F -0.170 7.170 12 C 0.515 3.485 13 O -0.512 6.512 14 N -0.672 5.672 15 C 0.110 3.890 16 H 0.104 0.896 17 C -0.111 4.111 18 C -0.111 4.111 19 H 0.089 0.911 20 C 0.134 3.866 21 N -0.379 5.379 22 C 0.257 3.743 23 N -0.587 5.587 24 C 0.183 3.817 25 N -0.344 5.344 26 C -0.138 4.138 27 C -0.192 4.192 28 C -0.077 4.077 29 H 0.386 0.614 30 H 0.130 0.870 31 H -0.281 1.281 32 H -0.301 1.301 33 H 0.150 0.850 34 H 0.143 0.857 35 H 0.425 0.575 36 H 0.098 0.902 37 H 0.124 0.876 38 H 0.146 0.854 39 H 0.101 0.899 40 H 0.260 0.740 41 H 0.228 0.772 42 H 0.097 0.903 43 H 0.051 0.949 44 H 0.143 0.857 45 H 0.155 0.845 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.159 7.316 -4.308 8.761 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.355 6.355 2 C -0.187 4.187 3 Si 0.667 3.333 4 C -0.139 4.139 5 C -0.076 4.076 6 C -0.156 4.156 7 C 0.042 3.958 8 O -0.224 6.224 9 C 0.357 3.643 10 F -0.151 7.151 11 F -0.152 7.152 12 C 0.294 3.706 13 O -0.386 6.386 14 N -0.326 5.326 15 C 0.006 3.994 16 H 0.122 0.878 17 C -0.149 4.149 18 C -0.131 4.131 19 H 0.107 0.893 20 C 0.013 3.987 21 N -0.170 5.170 22 C -0.039 4.039 23 N -0.315 5.315 24 C -0.120 4.120 25 N -0.172 5.172 26 C -0.176 4.176 27 C -0.211 4.211 28 C -0.094 4.094 29 H 0.236 0.764 30 H 0.148 0.852 31 H -0.208 1.208 32 H -0.229 1.229 33 H 0.167 0.833 34 H 0.161 0.839 35 H 0.264 0.736 36 H 0.116 0.884 37 H 0.142 0.858 38 H 0.164 0.836 39 H 0.119 0.881 40 H 0.275 0.725 41 H 0.244 0.756 42 H 0.115 0.885 43 H 0.070 0.930 44 H 0.161 0.839 45 H 0.172 0.828 Dipole moment (debyes) X Y Z Total from point charges 1.707 6.660 -3.353 7.649 hybrid contribution -0.958 0.196 -0.334 1.034 sum 0.748 6.856 -3.687 7.820 Atomic orbital electron populations 1.86579 1.18379 1.80329 1.50213 1.25191 0.83488 1.11681 0.98346 0.94140 0.90391 0.72116 0.76612 1.20433 1.00382 0.95258 0.97875 1.21047 0.97059 0.93806 0.95671 1.20704 0.99359 1.01629 0.93866 1.19258 0.97315 0.92532 0.86663 1.86650 1.64004 1.39402 1.32337 1.21775 0.76729 0.79455 0.86363 1.93197 1.50544 1.89780 1.81567 1.93195 1.78149 1.55379 1.88451 1.19503 0.80887 0.87126 0.83129 1.90858 1.54051 1.17480 1.76173 1.45785 1.48761 1.17167 1.20848 1.22906 0.96207 0.95100 0.85145 0.87796 1.23345 0.97122 0.99536 0.94933 1.22521 0.94772 0.99890 0.95879 0.89314 1.22232 0.84174 0.86686 1.05583 1.50777 1.32083 1.25090 1.09017 1.26910 0.89208 0.94908 0.92922 1.70543 1.26758 1.13649 1.20545 1.26418 0.96353 1.00494 0.88703 1.78006 1.17186 1.04119 1.17875 1.23522 0.95278 1.02114 0.96708 1.21608 1.04814 0.93197 1.01469 1.21033 0.95673 1.00362 0.92330 0.76422 0.85227 1.20767 1.22935 0.83277 0.83907 0.73551 0.88370 0.85779 0.83626 0.88054 0.72486 0.75597 0.88460 0.92970 0.83928 0.82767 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.81 12.77 -148.98 -1.90 -2.71 16 2 C -0.08 0.13 2.82 71.24 0.20 0.33 16 3 Si 0.76 -2.23 29.78 68.60 2.04 -0.19 16 4 C -0.14 0.02 5.39 -19.85 -0.11 -0.09 16 5 C -0.06 -0.07 9.60 22.25 0.21 0.14 16 6 C -0.14 -0.54 9.99 22.37 0.22 -0.32 16 7 C 0.08 0.50 6.48 22.51 0.15 0.65 16 8 O -0.31 -2.56 9.60 -73.40 -0.70 -3.27 16 9 C 0.43 1.46 2.05 71.24 0.15 1.61 16 10 F -0.17 -0.24 15.28 44.97 0.69 0.45 16 11 F -0.17 -0.20 15.31 44.97 0.69 0.48 16 12 C 0.52 1.91 7.34 87.66 0.64 2.56 16 13 O -0.51 -6.13 16.10 16.01 0.26 -5.87 16 14 N -0.67 3.15 5.35 -440.03 -2.36 0.79 16 15 C 0.11 -0.59 4.24 45.52 0.19 -0.40 16 16 H 0.10 -0.07 7.46 -2.39 -0.02 -0.09 16 17 C -0.11 1.46 7.39 31.12 0.23 1.69 16 18 C -0.11 1.01 3.87 -10.20 -0.04 0.97 16 19 H 0.09 -0.50 8.14 -2.39 -0.02 -0.51 16 20 C 0.13 -1.51 6.39 86.38 0.55 -0.96 16 21 N -0.38 1.00 3.69 -352.08 -1.30 -0.30 16 22 C 0.26 -0.74 12.63 180.36 2.28 1.54 16 23 N -0.59 -2.85 11.19 -204.01 -2.28 -5.13 16 24 C 0.18 0.83 13.03 180.76 2.36 3.18 16 25 N -0.34 -1.54 12.57 -61.25 -0.77 -2.31 16 26 C -0.14 0.60 7.44 31.18 0.23 0.84 16 27 C -0.19 -0.47 8.26 22.37 0.18 -0.29 16 28 C -0.08 0.05 8.66 22.26 0.19 0.24 16 29 H 0.39 -1.49 8.70 -74.06 -0.64 -2.14 16 30 H 0.13 -0.46 7.96 -2.39 -0.02 -0.48 16 31 H -0.28 -0.20 7.11 99.48 0.71 0.51 16 32 H -0.30 -1.48 7.11 99.48 0.71 -0.77 16 33 H 0.15 -0.18 8.06 -2.91 -0.02 -0.20 16 34 H 0.14 0.35 8.06 -2.91 -0.02 0.33 16 35 H 0.43 -4.75 8.73 -92.71 -0.81 -5.56 16 36 H 0.10 -1.37 8.14 -2.39 -0.02 -1.39 16 37 H 0.12 -2.26 8.08 -2.39 -0.02 -2.28 16 38 H 0.15 -2.75 8.09 -2.39 -0.02 -2.77 16 39 H 0.10 -1.27 7.85 -2.38 -0.02 -1.29 16 40 H 0.26 -3.45 8.06 -2.91 -0.02 -3.47 16 41 H 0.23 -0.12 8.06 -2.91 -0.02 -0.15 16 42 H 0.10 -0.55 7.90 -2.39 -0.02 -0.57 16 43 H 0.05 0.11 8.14 -2.39 -0.02 0.09 16 44 H 0.14 0.04 5.10 -2.91 -0.01 0.02 16 45 H 0.16 -0.84 4.87 -2.91 -0.01 -0.85 16 Total: 0.00 -29.59 392.82 1.67 -27.92 By element: Atomic # 1 Polarization: -21.23 SS G_CDS: -0.33 Total: -21.56 kcal Atomic # 6 Polarization: 4.05 SS G_CDS: 7.64 Total: 11.69 kcal Atomic # 7 Polarization: -0.24 SS G_CDS: -6.71 Total: -6.95 kcal Atomic # 8 Polarization: -9.50 SS G_CDS: -2.35 Total: -11.85 kcal Atomic # 9 Polarization: -0.44 SS G_CDS: 1.38 Total: 0.93 kcal Atomic # 14 Polarization: -2.23 SS G_CDS: 2.04 Total: -0.19 kcal Total: -29.59 1.67 -27.92 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14644236_4549640.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -11.535 kcal (2) G-P(sol) polarization free energy of solvation -29.593 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -41.128 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.672 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.921 kcal (6) G-S(sol) free energy of system = (1) + (5) -39.456 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.35 seconds