Wall clock time and date at job start Sun Mar 7 2021 00:09:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86299 * 109.47397 * 2 1 4 4 C 1.50704 * 109.46621 * 119.99715 * 2 1 3 5 5 C 1.38243 * 119.97200 * 245.00100 * 4 2 1 6 6 C 1.38283 * 120.11105 * 180.02562 * 5 4 2 7 7 C 1.38129 * 120.05835 * 359.97438 * 6 5 4 8 8 C 1.38749 * 119.94051 * 359.97438 * 7 6 5 9 9 O 1.35904 * 120.05570 * 180.02562 * 8 7 6 10 10 C 1.42903 * 116.99628 * 0.02562 * 9 8 7 11 11 C 1.50701 * 109.46878 * 179.97438 * 10 9 8 12 12 O 1.21280 * 119.99781 * 0.02562 * 11 10 9 13 13 N 1.34780 * 119.99795 * 179.97438 * 11 10 9 14 14 C 1.46497 * 119.99566 * 180.02562 * 13 11 10 15 15 H 1.08997 * 112.85356 * 334.66885 * 14 13 11 16 16 C 1.53780 * 113.61441 * 105.86757 * 14 13 11 17 17 C 1.53951 * 87.02099 * 139.94843 * 16 14 13 18 18 H 1.09004 * 113.53618 * 89.19033 * 17 16 14 19 19 C 1.53007 * 113.74444 * 220.05623 * 17 16 14 20 20 N 1.46500 * 109.46933 * 272.59884 * 19 17 16 21 21 C 1.34425 * 126.82053 * 125.00265 * 20 19 17 22 22 N 1.30830 * 108.07866 * 179.97438 * 21 20 19 23 23 C 1.33243 * 109.82940 * 359.97438 * 22 21 20 24 24 N 1.30714 * 108.94454 * 359.75203 * 23 22 21 25 25 C 1.53781 * 87.11250 * 334.63696 * 17 16 14 26 26 C 1.38170 * 119.97397 * 65.25653 * 4 2 1 27 27 H 0.96706 * 113.99346 * 60.00467 * 1 2 3 28 28 H 1.08994 * 109.47509 * 239.99316 * 2 1 3 29 29 H 1.48504 * 109.99849 * 298.68100 * 3 2 1 30 30 H 1.48503 * 109.99710 * 59.99459 * 3 2 1 31 31 H 1.08002 * 119.94319 * 359.97438 * 5 4 2 32 32 H 1.08006 * 119.97542 * 179.97438 * 6 5 4 33 33 H 1.07998 * 120.02665 * 180.02562 * 7 6 5 34 34 H 1.09002 * 109.47382 * 59.99787 * 10 9 8 35 35 H 1.09001 * 109.46938 * 299.99774 * 10 9 8 36 36 H 0.96995 * 120.00011 * 0.02562 * 13 11 10 37 37 H 1.08998 * 113.61756 * 254.53136 * 16 14 13 38 38 H 1.09004 * 113.61109 * 25.42851 * 16 14 13 39 39 H 1.08996 * 109.46585 * 32.59651 * 19 17 16 40 40 H 1.08997 * 109.46868 * 152.60192 * 19 17 16 41 41 H 1.08004 * 125.96114 * 359.97438 * 21 20 19 42 42 H 1.07999 * 125.53206 * 179.97438 * 23 22 21 43 43 H 1.08998 * 113.61622 * 270.81253 * 25 17 16 44 44 H 1.09003 * 113.68535 * 139.91779 * 25 17 16 45 45 H 1.08007 * 120.02501 * 359.97438 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2306 5 6 2.6386 -0.0116 2.1911 6 6 3.1012 -0.6607 3.3211 7 6 2.8571 -2.0093 3.4930 8 6 2.1465 -2.7126 2.5310 9 8 1.9045 -4.0395 2.6980 10 6 2.4107 -4.6463 3.8887 11 6 2.0477 -6.1089 3.9004 12 8 1.4180 -6.5848 2.9796 13 7 2.4238 -6.8883 4.9337 14 6 2.0714 -8.3102 4.9447 15 1 1.1840 -8.5310 4.3517 16 6 3.2585 -9.2414 4.6472 17 6 2.6983 -10.1720 5.7382 18 1 1.9829 -10.9031 5.3615 19 6 3.7753 -10.7980 6.6266 20 7 4.2554 -12.0381 6.0119 21 6 5.5287 -12.3491 5.7139 22 7 5.5405 -13.5430 5.1788 23 6 4.2993 -14.0239 5.1195 24 7 3.4775 -13.1409 5.6231 25 6 2.0397 -8.9260 6.3535 26 6 1.6890 -2.0607 1.3954 27 1 -0.3932 0.4417 -0.7652 28 1 1.7924 -0.5139 -0.8898 29 1 1.5880 2.4585 -1.2243 30 1 1.5615 2.4679 1.2085 31 1 2.8309 1.0428 2.0583 32 1 3.6540 -0.1128 4.0699 33 1 3.2182 -2.5157 4.3759 34 1 1.9745 -4.1571 4.7596 35 1 3.4952 -4.5405 3.9176 36 1 2.9277 -6.5077 5.6699 37 1 3.2337 -9.6747 3.6474 38 1 4.2268 -8.8081 4.8979 39 1 4.6063 -10.1011 6.7358 40 1 3.3542 -11.0181 7.6076 41 1 6.3916 -11.7227 5.8860 42 1 4.0182 -14.9885 4.7233 43 1 2.6741 -8.4064 7.0716 44 1 1.0323 -9.1039 6.7298 45 1 1.1395 -2.6069 0.6429 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14644236_4860298.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:09:28 Heat of formation + Delta-G solvation = 54.808673 kcal Electronic energy + Delta-G solvation = -28178.437208 eV Core-core repulsion = 23973.445494 eV Total energy + Delta-G solvation = -4204.991714 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.152 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -43.00362 -41.65163 -41.03926 -39.75545 -38.74212 -37.36850 -35.57556 -34.15935 -32.61426 -32.13791 -31.70964 -29.87277 -28.68396 -27.02165 -26.80722 -24.64621 -23.66331 -22.98003 -22.83129 -22.11648 -21.65401 -20.71932 -19.19560 -18.60340 -18.53702 -18.18032 -17.62326 -17.49102 -17.22378 -16.89785 -16.60070 -16.43107 -15.89305 -15.81656 -15.60965 -15.53616 -15.12029 -14.90983 -14.58557 -14.55546 -14.06816 -13.91257 -13.77236 -13.75598 -13.67979 -13.37811 -13.28245 -12.83204 -12.55201 -12.48946 -12.18798 -12.09014 -12.00105 -11.73795 -11.67309 -10.97637 -10.91314 -10.73459 -10.60129 -10.53779 -10.24987 -9.91625 -9.26407 -4.98017 0.19992 0.41384 0.67143 1.22333 1.27947 1.40494 1.41808 1.58399 1.93471 2.05473 2.49082 2.62405 3.10551 3.19746 3.25648 3.32571 3.39182 3.39456 3.52604 3.69921 3.70339 3.76298 3.85270 3.86579 3.89050 3.98214 4.03131 4.16278 4.20181 4.22907 4.29260 4.34489 4.49328 4.50680 4.58293 4.61222 4.71262 4.79334 4.96892 5.00155 5.22255 5.27620 5.30805 5.34882 5.46703 5.48209 5.63879 5.80780 6.17955 6.34114 6.42538 7.01363 7.13917 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.534 6.534 2 C -0.079 4.079 3 Si 0.689 3.311 4 C -0.033 4.033 5 C -0.151 4.151 6 C -0.073 4.073 7 C -0.206 4.206 8 C 0.128 3.872 9 O -0.289 6.289 10 C 0.040 3.960 11 C 0.516 3.484 12 O -0.510 6.510 13 N -0.719 5.719 14 C 0.128 3.872 15 H 0.119 0.881 16 C -0.148 4.148 17 C -0.121 4.121 18 H 0.111 0.889 19 C 0.142 3.858 20 N -0.378 5.378 21 C 0.253 3.747 22 N -0.547 5.547 23 C 0.199 3.801 24 N -0.318 5.318 25 C -0.135 4.135 26 C -0.119 4.119 27 H 0.381 0.619 28 H 0.079 0.921 29 H -0.261 1.261 30 H -0.255 1.255 31 H 0.130 0.870 32 H 0.132 0.868 33 H 0.130 0.870 34 H 0.095 0.905 35 H 0.095 0.905 36 H 0.403 0.597 37 H 0.075 0.925 38 H 0.088 0.912 39 H 0.103 0.897 40 H 0.093 0.907 41 H 0.217 0.783 42 H 0.217 0.783 43 H 0.092 0.908 44 H 0.084 0.916 45 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.405 4.138 4.907 8.392 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.189 4.189 3 Si 0.590 3.410 4 C -0.033 4.033 5 C -0.169 4.169 6 C -0.091 4.091 7 C -0.225 4.225 8 C 0.083 3.917 9 O -0.201 6.201 10 C -0.038 4.038 11 C 0.301 3.699 12 O -0.383 6.383 13 N -0.372 5.372 14 C 0.023 3.977 15 H 0.137 0.863 16 C -0.187 4.187 17 C -0.141 4.141 18 H 0.129 0.871 19 C 0.019 3.981 20 N -0.169 5.169 21 C -0.044 4.044 22 N -0.274 5.274 23 C -0.103 4.103 24 N -0.145 5.145 25 C -0.174 4.174 26 C -0.138 4.138 27 H 0.229 0.771 28 H 0.097 0.903 29 H -0.186 1.186 30 H -0.180 1.180 31 H 0.147 0.853 32 H 0.150 0.850 33 H 0.148 0.852 34 H 0.113 0.887 35 H 0.113 0.887 36 H 0.238 0.762 37 H 0.094 0.906 38 H 0.106 0.894 39 H 0.121 0.879 40 H 0.111 0.889 41 H 0.234 0.766 42 H 0.234 0.766 43 H 0.111 0.889 44 H 0.103 0.897 45 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 4.188 3.987 4.617 7.399 hybrid contribution -0.579 0.222 0.182 0.646 sum 3.609 4.208 4.798 7.332 Atomic orbital electron populations 1.86606 1.17561 1.80226 1.49772 1.24866 0.84698 1.11187 0.98126 0.94963 0.91596 0.74251 0.80194 1.19027 0.96759 0.92703 0.94810 1.20930 1.01414 0.99848 0.94719 1.20879 0.97715 0.93562 0.96900 1.21277 1.04753 0.96074 1.00372 1.18998 0.95506 0.82411 0.94791 1.86173 1.73792 1.20141 1.39995 1.22466 1.00674 0.91808 0.88895 1.20108 0.79649 0.87479 0.82654 1.90797 1.37859 1.74771 1.34854 1.45789 1.58292 1.09722 1.23392 1.22476 0.99131 0.78344 0.97749 0.86334 1.23621 0.98671 0.96443 0.99919 1.22735 0.98080 0.96349 0.96901 0.87119 1.21853 0.98481 0.81192 0.96530 1.50552 1.05866 1.14342 1.46151 1.26096 0.89033 0.94138 0.95128 1.70566 1.24041 1.09544 1.23204 1.26065 0.86297 1.00153 0.97830 1.78042 1.19416 0.95867 1.21202 1.23368 1.02474 0.95265 0.96310 1.20253 1.02610 0.93723 0.97215 0.77122 0.90304 1.18619 1.17951 0.85277 0.84987 0.85224 0.88737 0.88689 0.76249 0.90606 0.89352 0.87890 0.88867 0.76624 0.76644 0.88916 0.89691 0.84767 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.01 12.81 -35.23 -0.45 -1.46 16 2 C -0.08 -0.04 2.79 36.01 0.10 0.07 16 3 Si 0.69 -0.60 29.85 -169.99 -5.07 -5.68 16 4 C -0.03 -0.06 5.38 -104.64 -0.56 -0.62 16 5 C -0.15 -0.07 8.67 -39.56 -0.34 -0.41 16 6 C -0.07 0.04 10.04 -39.60 -0.40 -0.36 16 7 C -0.21 0.03 9.04 -39.43 -0.36 -0.32 16 8 C 0.13 0.30 6.69 -39.22 -0.26 0.03 16 9 O -0.29 -0.91 9.67 -39.35 -0.38 -1.29 16 10 C 0.04 -0.05 5.22 36.01 0.19 0.14 16 11 C 0.52 0.45 7.91 -10.98 -0.09 0.36 16 12 O -0.51 -3.19 16.12 -14.35 -0.23 -3.42 16 13 N -0.72 2.07 5.36 -53.02 -0.28 1.78 16 14 C 0.13 -0.28 4.21 -67.12 -0.28 -0.56 16 15 H 0.12 0.05 7.50 -51.93 -0.39 -0.34 16 16 C -0.15 0.38 7.45 -25.83 -0.19 0.19 16 17 C -0.12 0.38 3.88 -89.71 -0.35 0.03 16 18 H 0.11 -0.09 8.01 -51.93 -0.42 -0.50 16 19 C 0.14 -0.55 6.39 -4.04 -0.03 -0.57 16 20 N -0.38 0.10 3.69 -62.63 -0.23 -0.13 16 21 C 0.25 -0.09 12.63 -90.66 -1.14 -1.23 16 22 N -0.55 -1.49 11.19 -15.83 -0.18 -1.67 16 23 C 0.20 0.43 13.03 -91.81 -1.20 -0.77 16 24 N -0.32 -0.81 12.46 29.29 0.37 -0.44 16 25 C -0.14 0.62 7.39 -25.92 -0.19 0.43 16 26 C -0.12 -0.36 9.63 -39.43 -0.38 -0.74 16 27 H 0.38 -0.86 8.74 45.56 0.40 -0.46 16 28 H 0.08 -0.09 7.96 -51.93 -0.41 -0.50 16 29 H -0.26 -0.29 7.11 56.52 0.40 0.11 16 30 H -0.25 -0.53 7.05 56.52 0.40 -0.13 16 31 H 0.13 -0.16 4.86 -52.49 -0.26 -0.42 16 32 H 0.13 -0.40 8.06 -52.48 -0.42 -0.83 16 33 H 0.13 -0.41 6.30 -52.49 -0.33 -0.74 16 34 H 0.09 -0.35 7.66 -51.93 -0.40 -0.75 16 35 H 0.10 -0.38 7.66 -51.93 -0.40 -0.78 16 36 H 0.40 -2.59 8.71 -40.82 -0.36 -2.95 16 37 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 38 H 0.09 -0.36 7.91 -51.93 -0.41 -0.77 16 39 H 0.10 -0.70 7.80 -51.93 -0.41 -1.11 16 40 H 0.09 -0.39 8.14 -51.93 -0.42 -0.82 16 41 H 0.22 -1.04 8.06 -52.48 -0.42 -1.47 16 42 H 0.22 -0.18 8.06 -52.49 -0.42 -0.61 16 43 H 0.09 -0.62 8.07 -51.93 -0.42 -1.04 16 44 H 0.08 -0.35 8.14 -51.93 -0.42 -0.77 16 45 H 0.13 0.45 8.06 -52.48 -0.42 0.03 16 LS Contribution 383.49 15.07 5.78 5.78 Total: 0.00 -14.01 383.49 -12.12 -26.13 By element: Atomic # 1 Polarization: -9.31 SS G_CDS: -5.95 Total: -15.26 kcal Atomic # 6 Polarization: 1.13 SS G_CDS: -5.48 Total: -4.35 kcal Atomic # 7 Polarization: -0.13 SS G_CDS: -0.33 Total: -0.46 kcal Atomic # 8 Polarization: -5.10 SS G_CDS: -1.06 Total: -6.17 kcal Atomic # 14 Polarization: -0.60 SS G_CDS: -5.07 Total: -5.68 kcal Total LS contribution 5.78 Total: 5.78 kcal Total: -14.01 -12.12 -26.13 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14644236_4860298.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 80.941 kcal (2) G-P(sol) polarization free energy of solvation -14.012 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 66.928 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.120 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.132 kcal (6) G-S(sol) free energy of system = (1) + (5) 54.809 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds