Wall clock time and date at job start Sun Mar 7 2021 00:09:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35896 * 116.99644 * 2 1 4 4 C 1.38617 * 120.02502 * 180.22743 * 3 2 1 5 5 C 1.38657 * 119.88964 * 180.27246 * 4 3 2 6 6 O 1.35902 * 120.02923 * 179.77327 * 5 4 3 7 7 C 1.42898 * 116.99677 * 359.72550 * 6 5 4 8 8 C 1.50701 * 109.46806 * 180.02562 * 7 6 5 9 9 O 1.21276 * 120.00155 * 359.97438 * 8 7 6 10 10 N 1.34781 * 119.99685 * 179.97438 * 8 7 6 11 11 C 1.46499 * 119.99989 * 179.97438 * 10 8 7 12 12 H 1.09007 * 112.84641 * 23.80668 * 11 10 8 13 13 C 1.53774 * 113.61701 * 155.00227 * 11 10 8 14 14 C 1.53779 * 87.08287 * 139.98330 * 13 11 10 15 15 H 1.08996 * 113.60947 * 89.20504 * 14 13 11 16 16 C 1.53000 * 113.61261 * 220.01794 * 14 13 11 17 17 N 1.46499 * 109.46840 * 184.99882 * 16 14 13 18 18 C 1.34434 * 126.82191 * 124.99999 * 17 16 14 19 19 N 1.30831 * 108.08020 * 179.97438 * 18 17 16 20 20 C 1.33245 * 109.82847 * 0.02562 * 19 18 17 21 21 N 1.30718 * 108.94531 * 359.75451 * 20 19 18 22 22 C 1.53775 * 87.07909 * 334.56960 * 14 13 11 23 23 C 1.38750 * 119.94390 * 359.49493 * 5 4 3 24 24 C 1.50705 * 119.97178 * 180.27656 * 23 5 4 25 25 O 1.42898 * 109.47148 * 75.00150 * 24 23 5 26 26 Si 1.86299 * 109.46870 * 195.00041 * 24 23 5 27 27 C 1.38200 * 120.05661 * 0.25115 * 23 5 4 28 28 C 1.38152 * 120.10742 * 0.02562 * 27 23 5 29 29 H 1.09004 * 109.47266 * 299.99986 * 1 2 3 30 30 H 1.08995 * 109.47180 * 60.00318 * 1 2 3 31 31 H 1.09003 * 109.46989 * 180.02562 * 1 2 3 32 32 H 1.08001 * 120.05644 * 0.02562 * 4 3 2 33 33 H 1.08993 * 109.47278 * 59.99925 * 7 6 5 34 34 H 1.09004 * 109.46742 * 299.99664 * 7 6 5 35 35 H 0.96997 * 120.00238 * 0.02562 * 10 8 7 36 36 H 1.09006 * 113.61277 * 25.43324 * 13 11 10 37 37 H 1.09001 * 113.69334 * 254.54735 * 13 11 10 38 38 H 1.09002 * 109.47398 * 305.00209 * 16 14 13 39 39 H 1.09001 * 109.47194 * 65.00389 * 16 14 13 40 40 H 1.08000 * 125.96215 * 0.02562 * 18 17 16 41 41 H 1.07998 * 125.53102 * 179.97438 * 20 19 18 42 42 H 1.09005 * 113.61502 * 139.98686 * 22 14 13 43 43 H 1.08999 * 113.61676 * 270.88108 * 22 14 13 44 44 H 1.08998 * 109.47339 * 314.99831 * 24 23 5 45 45 H 0.96698 * 114.00470 * 60.00151 * 25 24 23 46 46 H 1.48503 * 109.99922 * 179.97438 * 26 24 23 47 47 H 1.48500 * 110.00212 * 301.31582 * 26 24 23 48 48 H 1.07995 * 119.94468 * 179.97438 * 27 23 5 49 49 H 1.07999 * 119.97446 * 180.02562 * 28 27 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 3.4301 1.2841 -0.0048 5 6 4.0566 2.5211 0.0010 6 8 5.4136 2.5962 0.0010 7 6 6.1316 1.3607 0.0010 8 6 7.6124 1.6404 0.0016 9 8 8.0134 2.7849 0.0016 10 7 8.4912 0.6184 0.0023 11 6 9.9308 0.8903 0.0024 12 1 10.1761 1.8721 0.4074 13 6 10.7730 -0.2499 0.5985 14 6 11.7874 0.0171 -0.5260 15 1 12.5422 0.7592 -0.2659 16 6 12.3880 -1.2564 -1.1247 17 7 13.4230 -0.8976 -2.0974 18 6 14.7014 -1.3135 -2.1039 19 7 15.2996 -0.7710 -3.1332 20 6 14.4397 -0.0055 -3.8040 21 7 13.2757 -0.0548 -3.2111 22 6 10.6149 0.5876 -1.3411 23 6 3.2970 3.6822 0.0009 24 6 3.9773 5.0269 0.0008 25 8 4.5035 5.2945 -1.3006 26 14 2.7437 6.3469 0.4553 27 6 1.9171 3.6065 0.0003 28 6 1.2905 2.3753 0.0003 29 1 -0.3634 0.5138 0.8900 30 1 -0.3633 0.5138 -0.8900 31 1 -0.3633 -1.0277 0.0005 32 1 4.0197 0.3792 -0.0089 33 1 5.8700 0.7883 -0.8889 34 1 5.8699 0.7884 0.8911 35 1 8.1706 -0.2970 0.0020 36 1 10.2944 -1.2271 0.5319 37 1 11.1588 -0.0347 1.5949 38 1 12.8289 -1.8586 -0.3303 39 1 11.6047 -1.8285 -1.6221 40 1 15.1552 -1.9799 -1.3854 41 1 14.6664 0.5607 -4.6953 42 1 10.8728 1.4804 -1.9109 43 1 10.0932 -0.1605 -1.9380 44 1 4.7897 5.0232 0.7275 45 1 3.8350 5.3129 -1.9990 46 1 3.4023 7.6779 0.4593 47 1 1.6150 6.3412 -0.5098 48 1 1.3276 4.5114 0.0006 49 1 0.2120 2.3187 -0.0005 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14644236_4974312.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:09:38 Heat of formation + Delta-G solvation = 21.597586 kcal Electronic energy + Delta-G solvation = -33103.762865 eV Core-core repulsion = 28423.111199 eV Total energy + Delta-G solvation = -4680.651665 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.167 amu Computer time = 1.38 seconds Orbital eigenvalues (eV) -42.97763 -41.84009 -41.22623 -40.20373 -39.38190 -38.19853 -36.91330 -35.52364 -34.10527 -32.29516 -32.11347 -31.46172 -29.92194 -28.74257 -28.46967 -26.91957 -26.07626 -24.77540 -23.56451 -22.88218 -22.50364 -22.38960 -21.66379 -20.86034 -19.98108 -18.62519 -18.37710 -17.99505 -17.87771 -17.51685 -17.31654 -17.08308 -16.84654 -16.77186 -16.43959 -16.11833 -15.93840 -15.83139 -15.55151 -15.43863 -15.15663 -15.03373 -14.67591 -14.61166 -14.47146 -13.86186 -13.69089 -13.66209 -13.57084 -13.41298 -13.21971 -13.13896 -12.97020 -12.58448 -12.37126 -12.28210 -12.06696 -11.97702 -11.70077 -11.55987 -11.53778 -10.92319 -10.86354 -10.71704 -10.61376 -10.37604 -10.15849 -9.70641 -9.08795 -4.89053 0.20381 0.32521 0.69314 1.30205 1.39200 1.43052 1.48704 1.62835 2.04946 2.07389 2.13783 2.53648 2.58068 3.07829 3.23585 3.38323 3.40930 3.52332 3.57441 3.58793 3.67436 3.77602 3.81086 3.85842 3.91676 3.94456 3.99043 4.00117 4.02293 4.08052 4.12771 4.24530 4.36308 4.38956 4.39951 4.45639 4.50678 4.53721 4.58738 4.76361 4.78008 4.99760 5.03362 5.04156 5.22142 5.27629 5.31168 5.38592 5.45236 5.50592 5.82591 6.10002 6.28066 6.36696 6.63205 7.09630 7.16202 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.315 6.315 3 C 0.174 3.826 4 C -0.247 4.247 5 C 0.193 3.807 6 O -0.272 6.272 7 C 0.037 3.963 8 C 0.517 3.483 9 O -0.506 6.506 10 N -0.719 5.719 11 C 0.125 3.875 12 H 0.119 0.881 13 C -0.136 4.136 14 C -0.120 4.120 15 H 0.101 0.899 16 C 0.141 3.859 17 N -0.380 5.380 18 C 0.252 3.748 19 N -0.547 5.547 20 C 0.197 3.803 21 N -0.312 5.312 22 C -0.136 4.136 23 C -0.181 4.181 24 C -0.059 4.059 25 O -0.521 6.521 26 Si 0.686 3.314 27 C -0.043 4.043 28 C -0.239 4.239 29 H 0.060 0.940 30 H 0.058 0.942 31 H 0.103 0.897 32 H 0.138 0.862 33 H 0.095 0.905 34 H 0.096 0.904 35 H 0.402 0.598 36 H 0.092 0.908 37 H 0.083 0.917 38 H 0.105 0.895 39 H 0.091 0.909 40 H 0.218 0.782 41 H 0.217 0.783 42 H 0.078 0.922 43 H 0.087 0.913 44 H 0.118 0.882 45 H 0.369 0.631 46 H -0.257 1.257 47 H -0.261 1.261 48 H 0.138 0.862 49 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.619 -7.330 4.681 9.848 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.228 6.228 3 C 0.128 3.872 4 C -0.267 4.267 5 C 0.146 3.854 6 O -0.183 6.183 7 C -0.042 4.042 8 C 0.301 3.699 9 O -0.379 6.379 10 N -0.372 5.372 11 C 0.020 3.980 12 H 0.136 0.864 13 C -0.175 4.175 14 C -0.139 4.139 15 H 0.119 0.881 16 C 0.019 3.981 17 N -0.171 5.171 18 C -0.045 4.045 19 N -0.274 5.274 20 C -0.106 4.106 21 N -0.140 5.140 22 C -0.174 4.174 23 C -0.183 4.183 24 C -0.169 4.169 25 O -0.326 6.326 26 Si 0.588 3.412 27 C -0.060 4.060 28 C -0.258 4.258 29 H 0.078 0.922 30 H 0.077 0.923 31 H 0.121 0.879 32 H 0.156 0.844 33 H 0.113 0.887 34 H 0.114 0.886 35 H 0.237 0.763 36 H 0.111 0.889 37 H 0.102 0.898 38 H 0.123 0.877 39 H 0.109 0.891 40 H 0.234 0.766 41 H 0.233 0.767 42 H 0.097 0.903 43 H 0.106 0.894 44 H 0.135 0.865 45 H 0.216 0.784 46 H -0.182 1.182 47 H -0.186 1.186 48 H 0.156 0.844 49 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges -4.332 -5.418 4.485 8.261 hybrid contribution -0.353 -1.174 -1.047 1.613 sum -4.685 -6.593 3.438 8.788 Atomic orbital electron populations 1.23148 0.77592 1.04422 1.01789 1.86074 1.22029 1.26683 1.88003 1.18691 0.91457 0.84387 0.92645 1.20389 0.92923 0.97320 1.16042 1.18403 0.81983 0.92427 0.92602 1.86269 1.14724 1.29578 1.87713 1.22529 0.90344 0.87157 1.04201 1.20046 0.87360 0.85744 0.76722 1.90807 1.79702 1.20841 1.46572 1.45777 1.06113 1.09030 1.76273 1.22529 0.77966 1.00213 0.97274 0.86361 1.23385 0.96117 0.99214 0.98782 1.22625 0.96898 0.97185 0.97212 0.88074 1.21862 0.89807 0.97148 0.89327 1.50588 1.10013 1.35400 1.21087 1.26132 0.82586 0.98221 0.97567 1.70567 1.33911 1.15016 1.07867 1.26082 0.86412 0.97694 1.00417 1.78099 1.23374 1.13597 0.98884 1.23469 0.95084 1.02249 0.96630 1.19513 0.92731 0.94384 1.11628 1.24821 1.05952 0.97770 0.88393 1.86704 1.36924 1.92763 1.16227 0.95216 0.77609 0.78182 0.90214 1.20783 0.92692 0.97891 0.94665 1.21120 1.00443 0.91770 1.12462 0.92151 0.92300 0.87878 0.84431 0.88681 0.88587 0.76311 0.88926 0.89820 0.87668 0.89090 0.76554 0.76716 0.90293 0.89432 0.86462 0.78396 1.18182 1.18623 0.84432 0.84775 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 9.81 101.05 0.99 0.93 16 2 O -0.32 -0.24 10.49 -19.41 -0.20 -0.45 16 3 C 0.17 0.20 6.68 -39.24 -0.26 -0.06 16 4 C -0.25 -0.27 8.97 -39.29 -0.35 -0.62 16 5 C 0.19 0.45 6.66 -39.24 -0.26 0.19 16 6 O -0.27 -0.93 8.99 -39.34 -0.35 -1.28 16 7 C 0.04 -0.02 5.22 36.01 0.19 0.17 16 8 C 0.52 0.84 7.91 -10.98 -0.09 0.75 16 9 O -0.51 -3.50 16.10 -14.35 -0.23 -3.73 16 10 N -0.72 1.42 5.35 -53.02 -0.28 1.14 16 11 C 0.12 -0.18 4.24 -67.13 -0.28 -0.47 16 12 H 0.12 0.11 7.46 -51.93 -0.39 -0.28 16 13 C -0.14 0.60 7.39 -25.92 -0.19 0.41 16 14 C -0.12 0.35 3.86 -89.81 -0.35 0.00 16 15 H 0.10 -0.15 8.14 -51.93 -0.42 -0.57 16 16 C 0.14 -0.51 6.39 -4.04 -0.03 -0.54 16 17 N -0.38 0.02 3.69 -62.63 -0.23 -0.21 16 18 C 0.25 -0.05 12.63 -90.65 -1.14 -1.19 16 19 N -0.55 -1.60 11.19 -15.83 -0.18 -1.77 16 20 C 0.20 0.47 13.03 -91.81 -1.20 -0.72 16 21 N -0.31 -0.84 12.57 29.29 0.37 -0.48 16 22 C -0.14 0.15 7.43 -25.92 -0.19 -0.04 16 23 C -0.18 -0.34 5.27 -104.44 -0.55 -0.89 16 24 C -0.06 -0.14 2.37 36.01 0.09 -0.05 16 25 O -0.52 -2.17 12.88 -35.23 -0.45 -2.62 16 26 Si 0.69 0.20 30.24 -169.99 -5.14 -4.94 16 27 C -0.04 -0.01 8.65 -39.63 -0.34 -0.35 16 28 C -0.24 -0.02 9.04 -39.41 -0.36 -0.38 16 29 H 0.06 -0.21 7.66 -51.93 -0.40 -0.61 16 30 H 0.06 -0.19 7.66 -51.93 -0.40 -0.59 16 31 H 0.10 -0.42 8.14 -51.93 -0.42 -0.84 16 32 H 0.14 -0.12 6.30 -52.49 -0.33 -0.46 16 33 H 0.10 -0.24 7.65 -51.93 -0.40 -0.64 16 34 H 0.10 -0.30 7.67 -51.93 -0.40 -0.70 16 35 H 0.40 -2.15 8.73 -40.82 -0.36 -2.51 16 36 H 0.09 -0.57 8.08 -51.93 -0.42 -0.99 16 37 H 0.08 -0.37 8.14 -51.93 -0.42 -0.80 16 38 H 0.11 -0.68 8.09 -51.93 -0.42 -1.10 16 39 H 0.09 -0.37 7.84 -51.93 -0.41 -0.78 16 40 H 0.22 -1.01 8.06 -52.49 -0.42 -1.44 16 41 H 0.22 -0.10 8.06 -52.49 -0.42 -0.53 16 42 H 0.08 0.12 8.14 -51.93 -0.42 -0.30 16 43 H 0.09 -0.13 7.90 -51.93 -0.41 -0.54 16 44 H 0.12 0.37 7.82 -51.93 -0.41 -0.04 16 45 H 0.37 0.25 8.70 45.56 0.40 0.65 16 46 H -0.26 -0.97 7.11 56.52 0.40 -0.57 16 47 H -0.26 -0.32 6.68 56.52 0.38 0.05 16 48 H 0.14 -0.19 4.85 -52.49 -0.25 -0.44 16 49 H 0.13 -0.27 6.29 -52.49 -0.33 -0.60 16 LS Contribution 412.24 15.07 6.21 6.21 Total: 0.00 -14.10 412.24 -11.50 -25.60 By element: Atomic # 1 Polarization: -7.94 SS G_CDS: -6.67 Total: -14.61 kcal Atomic # 6 Polarization: 1.46 SS G_CDS: -4.33 Total: -2.87 kcal Atomic # 7 Polarization: -0.99 SS G_CDS: -0.32 Total: -1.32 kcal Atomic # 8 Polarization: -6.83 SS G_CDS: -1.24 Total: -8.08 kcal Atomic # 14 Polarization: 0.20 SS G_CDS: -5.14 Total: -4.94 kcal Total LS contribution 6.21 Total: 6.21 kcal Total: -14.10 -11.50 -25.60 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14644236_4974312.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 47.199 kcal (2) G-P(sol) polarization free energy of solvation -14.102 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 33.097 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.499 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.601 kcal (6) G-S(sol) free energy of system = (1) + (5) 21.598 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.38 seconds