Wall clock time and date at job start Sun Mar 7 2021 00:09:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35896 * 116.99644 * 2 1 4 4 C 1.38617 * 120.02502 * 180.22743 * 3 2 1 5 5 C 1.38657 * 119.88964 * 180.27246 * 4 3 2 6 6 O 1.35902 * 120.02923 * 179.77327 * 5 4 3 7 7 C 1.42898 * 116.99677 * 359.72550 * 6 5 4 8 8 C 1.50701 * 109.46806 * 180.02562 * 7 6 5 9 9 O 1.21276 * 120.00155 * 359.97438 * 8 7 6 10 10 N 1.34781 * 119.99685 * 179.97438 * 8 7 6 11 11 C 1.46499 * 119.99989 * 179.97438 * 10 8 7 12 12 H 1.09007 * 112.84641 * 23.80668 * 11 10 8 13 13 C 1.53774 * 113.61701 * 155.00227 * 11 10 8 14 14 C 1.53779 * 87.08287 * 139.98330 * 13 11 10 15 15 H 1.08996 * 113.60947 * 89.20504 * 14 13 11 16 16 C 1.53000 * 113.61261 * 220.01794 * 14 13 11 17 17 N 1.46499 * 109.46840 * 184.99882 * 16 14 13 18 18 C 1.34434 * 126.82191 * 124.99999 * 17 16 14 19 19 N 1.30831 * 108.08020 * 179.97438 * 18 17 16 20 20 C 1.33245 * 109.82847 * 0.02562 * 19 18 17 21 21 N 1.30718 * 108.94531 * 359.75451 * 20 19 18 22 22 C 1.53775 * 87.07909 * 334.56960 * 14 13 11 23 23 C 1.38750 * 119.94390 * 359.49493 * 5 4 3 24 24 C 1.50705 * 119.97178 * 180.27656 * 23 5 4 25 25 O 1.42898 * 109.47148 * 75.00150 * 24 23 5 26 26 Si 1.86299 * 109.46870 * 195.00041 * 24 23 5 27 27 C 1.38200 * 120.05661 * 0.25115 * 23 5 4 28 28 C 1.38152 * 120.10742 * 0.02562 * 27 23 5 29 29 H 1.09004 * 109.47266 * 299.99986 * 1 2 3 30 30 H 1.08995 * 109.47180 * 60.00318 * 1 2 3 31 31 H 1.09003 * 109.46989 * 180.02562 * 1 2 3 32 32 H 1.08001 * 120.05644 * 0.02562 * 4 3 2 33 33 H 1.08993 * 109.47278 * 59.99925 * 7 6 5 34 34 H 1.09004 * 109.46742 * 299.99664 * 7 6 5 35 35 H 0.96997 * 120.00238 * 0.02562 * 10 8 7 36 36 H 1.09006 * 113.61277 * 25.43324 * 13 11 10 37 37 H 1.09001 * 113.69334 * 254.54735 * 13 11 10 38 38 H 1.09002 * 109.47398 * 305.00209 * 16 14 13 39 39 H 1.09001 * 109.47194 * 65.00389 * 16 14 13 40 40 H 1.08000 * 125.96215 * 0.02562 * 18 17 16 41 41 H 1.07998 * 125.53102 * 179.97438 * 20 19 18 42 42 H 1.09005 * 113.61502 * 139.98686 * 22 14 13 43 43 H 1.08999 * 113.61676 * 270.88108 * 22 14 13 44 44 H 1.08998 * 109.47339 * 314.99831 * 24 23 5 45 45 H 0.96698 * 114.00470 * 60.00151 * 25 24 23 46 46 H 1.48503 * 109.99922 * 179.97438 * 26 24 23 47 47 H 1.48500 * 110.00212 * 301.31582 * 26 24 23 48 48 H 1.07995 * 119.94468 * 179.97438 * 27 23 5 49 49 H 1.07999 * 119.97446 * 180.02562 * 28 27 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 3.4301 1.2841 -0.0048 5 6 4.0566 2.5211 0.0010 6 8 5.4136 2.5962 0.0010 7 6 6.1316 1.3607 0.0010 8 6 7.6124 1.6404 0.0016 9 8 8.0134 2.7849 0.0016 10 7 8.4912 0.6184 0.0023 11 6 9.9308 0.8903 0.0024 12 1 10.1761 1.8721 0.4074 13 6 10.7730 -0.2499 0.5985 14 6 11.7874 0.0171 -0.5260 15 1 12.5422 0.7592 -0.2659 16 6 12.3880 -1.2564 -1.1247 17 7 13.4230 -0.8976 -2.0974 18 6 14.7014 -1.3135 -2.1039 19 7 15.2996 -0.7710 -3.1332 20 6 14.4397 -0.0055 -3.8040 21 7 13.2757 -0.0548 -3.2111 22 6 10.6149 0.5876 -1.3411 23 6 3.2970 3.6822 0.0009 24 6 3.9773 5.0269 0.0008 25 8 4.5035 5.2945 -1.3006 26 14 2.7437 6.3469 0.4553 27 6 1.9171 3.6065 0.0003 28 6 1.2905 2.3753 0.0003 29 1 -0.3634 0.5138 0.8900 30 1 -0.3633 0.5138 -0.8900 31 1 -0.3633 -1.0277 0.0005 32 1 4.0197 0.3792 -0.0089 33 1 5.8700 0.7883 -0.8889 34 1 5.8699 0.7884 0.8911 35 1 8.1706 -0.2970 0.0020 36 1 10.2944 -1.2271 0.5319 37 1 11.1588 -0.0347 1.5949 38 1 12.8289 -1.8586 -0.3303 39 1 11.6047 -1.8285 -1.6221 40 1 15.1552 -1.9799 -1.3854 41 1 14.6664 0.5607 -4.6953 42 1 10.8728 1.4804 -1.9109 43 1 10.0932 -0.1605 -1.9380 44 1 4.7897 5.0232 0.7275 45 1 3.8350 5.3129 -1.9990 46 1 3.4023 7.6779 0.4593 47 1 1.6150 6.3412 -0.5098 48 1 1.3276 4.5114 0.0006 49 1 0.2120 2.3187 -0.0005 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14644236_4974312.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:09:36 Heat of formation + Delta-G solvation = 17.890971 kcal Electronic energy + Delta-G solvation = -33103.923595 eV Core-core repulsion = 28423.111199 eV Total energy + Delta-G solvation = -4680.812396 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.167 amu Computer time = 1.47 seconds Orbital eigenvalues (eV) -42.97939 -41.87453 -41.22119 -40.16797 -39.42455 -38.34145 -37.02536 -35.51871 -34.11960 -32.32160 -32.16180 -31.46861 -29.91177 -28.63799 -28.32097 -26.74979 -26.14886 -24.73479 -23.56966 -22.86234 -22.52578 -22.37820 -21.71047 -20.72125 -19.98363 -18.64949 -18.35023 -18.10044 -17.89094 -17.54847 -17.28918 -17.05668 -16.76380 -16.67868 -16.50051 -16.12121 -16.06171 -15.81245 -15.52979 -15.50579 -15.19197 -15.01837 -14.74494 -14.53222 -14.49257 -13.77986 -13.71082 -13.53618 -13.46284 -13.35553 -13.18950 -13.15234 -12.89724 -12.49454 -12.31820 -12.25983 -12.03925 -11.94287 -11.67239 -11.64263 -11.43994 -11.03877 -10.97175 -10.79584 -10.57148 -10.53330 -10.16377 -9.71662 -9.11979 -4.94712 0.18585 0.29188 0.70658 1.30045 1.37697 1.41485 1.49386 1.54244 1.94959 2.01023 2.24015 2.54533 2.57714 3.29199 3.41057 3.47521 3.49161 3.53898 3.65344 3.70712 3.72554 3.78935 3.91837 3.92635 4.03063 4.05267 4.11883 4.15592 4.18630 4.31783 4.33715 4.39387 4.42142 4.45569 4.56798 4.64320 4.68969 4.69888 4.78750 4.78962 4.94805 5.00784 5.02959 5.12334 5.22034 5.26422 5.33525 5.44899 5.45329 5.50046 5.96161 6.11831 6.34606 6.43173 6.55307 7.09604 7.13696 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 O -0.329 6.329 3 C 0.165 3.835 4 C -0.251 4.251 5 C 0.176 3.824 6 O -0.304 6.304 7 C 0.035 3.965 8 C 0.512 3.488 9 O -0.572 6.572 10 N -0.697 5.697 11 C 0.114 3.886 12 H 0.086 0.914 13 C -0.109 4.109 14 C -0.112 4.112 15 H 0.082 0.918 16 C 0.135 3.865 17 N -0.379 5.379 18 C 0.257 3.743 19 N -0.586 5.586 20 C 0.183 3.817 21 N -0.346 5.346 22 C -0.137 4.137 23 C -0.196 4.196 24 C -0.079 4.079 25 O -0.550 6.550 26 Si 0.783 3.217 27 C -0.041 4.041 28 C -0.238 4.238 29 H 0.071 0.929 30 H 0.066 0.934 31 H 0.117 0.883 32 H 0.154 0.846 33 H 0.119 0.881 34 H 0.127 0.873 35 H 0.423 0.577 36 H 0.125 0.875 37 H 0.091 0.909 38 H 0.146 0.854 39 H 0.102 0.898 40 H 0.261 0.739 41 H 0.228 0.772 42 H 0.040 0.960 43 H 0.096 0.904 44 H 0.097 0.903 45 H 0.381 0.619 46 H -0.309 1.309 47 H -0.262 1.262 48 H 0.156 0.844 49 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.313 -10.318 5.937 13.474 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 O -0.243 6.243 3 C 0.119 3.881 4 C -0.270 4.270 5 C 0.130 3.870 6 O -0.217 6.217 7 C -0.043 4.043 8 C 0.298 3.702 9 O -0.451 6.451 10 N -0.351 5.351 11 C 0.009 3.991 12 H 0.104 0.896 13 C -0.147 4.147 14 C -0.132 4.132 15 H 0.100 0.900 16 C 0.015 3.985 17 N -0.170 5.170 18 C -0.039 4.039 19 N -0.314 5.314 20 C -0.120 4.120 21 N -0.174 5.174 22 C -0.176 4.176 23 C -0.197 4.197 24 C -0.186 4.186 25 O -0.358 6.358 26 Si 0.686 3.314 27 C -0.059 4.059 28 C -0.256 4.256 29 H 0.089 0.911 30 H 0.085 0.915 31 H 0.135 0.865 32 H 0.172 0.828 33 H 0.136 0.864 34 H 0.145 0.855 35 H 0.261 0.739 36 H 0.143 0.857 37 H 0.110 0.890 38 H 0.164 0.836 39 H 0.120 0.880 40 H 0.276 0.724 41 H 0.244 0.756 42 H 0.059 0.941 43 H 0.114 0.886 44 H 0.115 0.885 45 H 0.230 0.770 46 H -0.237 1.237 47 H -0.188 1.188 48 H 0.173 0.827 49 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges -6.048 -8.510 5.749 11.919 hybrid contribution 0.200 -0.292 -1.438 1.481 sum -5.849 -8.802 4.311 11.414 Atomic orbital electron populations 1.23407 0.75991 1.05737 1.02687 1.86054 1.23759 1.26525 1.87914 1.18866 0.91647 0.84975 0.92636 1.20554 0.93408 0.97383 1.15681 1.18595 0.81701 0.93219 0.93496 1.86229 1.15569 1.31748 1.88123 1.22759 0.88386 0.86483 1.06681 1.20567 0.88682 0.85327 0.75595 1.90779 1.80807 1.23502 1.49978 1.45638 1.05590 1.09438 1.74389 1.22517 0.78524 1.00382 0.97695 0.89622 1.23298 0.94092 0.99091 0.98258 1.22493 0.96111 0.97269 0.97330 0.89975 1.22234 0.89815 0.96814 0.89672 1.50790 1.10912 1.34625 1.20684 1.26932 0.82328 0.97520 0.97154 1.70540 1.35117 1.16286 1.09449 1.26423 0.86506 0.98031 1.01057 1.78019 1.23967 1.15051 1.00360 1.23456 0.96603 1.01050 0.96522 1.19606 0.93542 0.93935 1.12643 1.25176 1.06291 0.99878 0.87283 1.86654 1.38586 1.93081 1.17490 0.94122 0.75431 0.73290 0.88536 1.20944 0.91974 0.98847 0.94100 1.21401 1.01629 0.91234 1.11355 0.91072 0.91531 0.86497 0.82796 0.86376 0.85508 0.73857 0.85673 0.88990 0.83596 0.88031 0.72365 0.75589 0.94145 0.88580 0.88539 0.77031 1.23737 1.18770 0.82713 0.82494 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.11 9.81 113.37 1.11 1.00 16 2 O -0.33 -0.09 10.49 -92.38 -0.97 -1.06 16 3 C 0.17 0.23 6.68 22.49 0.15 0.38 16 4 C -0.25 -0.49 8.97 22.46 0.20 -0.28 16 5 C 0.18 1.01 6.66 22.49 0.15 1.16 16 6 O -0.30 -2.69 8.99 -73.40 -0.66 -3.35 16 7 C 0.03 -0.01 5.22 71.24 0.37 0.36 16 8 C 0.51 2.58 7.91 87.66 0.69 3.27 16 9 O -0.57 -10.14 16.10 16.02 0.26 -9.88 16 10 N -0.70 2.52 5.35 -440.05 -2.36 0.16 16 11 C 0.11 -0.20 4.24 45.51 0.19 0.00 16 12 H 0.09 0.46 7.46 -2.38 -0.02 0.44 16 13 C -0.11 1.13 7.39 31.12 0.23 1.36 16 14 C -0.11 0.67 3.86 -10.27 -0.04 0.63 16 15 H 0.08 -0.14 8.14 -2.39 -0.02 -0.16 16 16 C 0.13 -1.23 6.39 86.38 0.55 -0.68 16 17 N -0.38 0.20 3.69 -352.06 -1.30 -1.10 16 18 C 0.26 -0.31 12.63 180.36 2.28 1.97 16 19 N -0.59 -3.78 11.19 -203.99 -2.28 -6.06 16 20 C 0.18 1.17 13.03 180.76 2.36 3.53 16 21 N -0.35 -2.36 12.57 -61.24 -0.77 -3.13 16 22 C -0.14 0.10 7.43 31.12 0.23 0.33 16 23 C -0.20 -0.92 5.27 -19.75 -0.10 -1.02 16 24 C -0.08 -0.53 2.37 71.24 0.17 -0.36 16 25 O -0.55 -6.02 12.88 -148.98 -1.92 -7.94 16 26 Si 0.78 0.88 30.24 68.60 2.07 2.96 16 27 C -0.04 0.00 8.65 22.24 0.19 0.19 16 28 C -0.24 0.25 9.04 22.38 0.20 0.46 16 29 H 0.07 -0.63 7.66 -2.39 -0.02 -0.65 16 30 H 0.07 -0.55 7.66 -2.39 -0.02 -0.57 16 31 H 0.12 -1.15 8.14 -2.39 -0.02 -1.17 16 32 H 0.15 -0.43 6.30 -2.91 -0.02 -0.45 16 33 H 0.12 -0.64 7.65 -2.39 -0.02 -0.66 16 34 H 0.13 -0.90 7.67 -2.39 -0.02 -0.92 16 35 H 0.42 -5.16 8.73 -92.71 -0.81 -5.97 16 36 H 0.13 -2.04 8.08 -2.38 -0.02 -2.06 16 37 H 0.09 -0.99 8.14 -2.39 -0.02 -1.01 16 38 H 0.15 -2.48 8.09 -2.39 -0.02 -2.50 16 39 H 0.10 -1.07 7.84 -2.39 -0.02 -1.09 16 40 H 0.26 -3.10 8.06 -2.91 -0.02 -3.13 16 41 H 0.23 0.29 8.06 -2.91 -0.02 0.27 16 42 H 0.04 0.29 8.14 -2.38 -0.02 0.27 16 43 H 0.10 -0.25 7.90 -2.39 -0.02 -0.27 16 44 H 0.10 0.96 7.82 -2.39 -0.02 0.94 16 45 H 0.38 1.28 8.70 -74.06 -0.64 0.63 16 46 H -0.31 -2.99 7.11 99.48 0.71 -2.28 16 47 H -0.26 -0.33 6.68 99.48 0.66 0.33 16 48 H 0.16 -0.65 4.85 -2.91 -0.01 -0.66 16 49 H 0.16 -0.99 6.29 -2.91 -0.02 -1.01 16 Total: 0.00 -39.35 412.24 0.57 -38.78 By element: Atomic # 1 Polarization: -21.22 SS G_CDS: -0.44 Total: -21.67 kcal Atomic # 6 Polarization: 3.35 SS G_CDS: 8.94 Total: 12.28 kcal Atomic # 7 Polarization: -3.42 SS G_CDS: -6.71 Total: -10.12 kcal Atomic # 8 Polarization: -18.94 SS G_CDS: -3.29 Total: -22.23 kcal Atomic # 14 Polarization: 0.88 SS G_CDS: 2.07 Total: 2.96 kcal Total: -39.35 0.57 -38.78 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14644236_4974312.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 56.669 kcal (2) G-P(sol) polarization free energy of solvation -39.349 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 17.320 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.571 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.778 kcal (6) G-S(sol) free energy of system = (1) + (5) 17.891 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.47 seconds