Wall clock time and date at job start Sun Mar 7 2021 00:09:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.35997 * 116.99802 * 2 1 4 4 C 1.39153 * 120.07310 * 180.02562 * 3 2 1 5 5 O 1.35999 * 120.07288 * 359.97438 * 4 3 2 6 6 C 1.42903 * 116.99581 * 180.02562 * 5 4 3 7 7 C 1.50700 * 109.46603 * 180.02562 * 6 5 4 8 8 O 1.21279 * 120.00260 * 359.97438 * 7 6 5 9 9 N 1.34774 * 119.99982 * 180.02562 * 7 6 5 10 10 C 1.46499 * 120.00118 * 179.97438 * 9 7 6 11 11 H 1.09000 * 112.85206 * 23.79873 * 10 9 7 12 12 C 1.53780 * 113.61673 * 154.99752 * 10 9 7 13 13 C 1.53780 * 87.08488 * 140.06112 * 12 10 9 14 14 H 1.09003 * 113.61137 * 89.20025 * 13 12 10 15 15 C 1.52997 * 113.61900 * 220.01941 * 13 12 10 16 16 N 1.46505 * 109.47212 * 184.99939 * 15 13 12 17 17 C 1.34431 * 126.82034 * 124.70925 * 16 15 13 18 18 N 1.30831 * 108.07452 * 179.89522 * 17 16 15 19 19 C 1.33242 * 109.83134 * 0.38128 * 18 17 16 20 20 N 1.30720 * 108.94259 * 359.76538 * 19 18 17 21 21 C 1.53787 * 87.08169 * 334.56869 * 13 12 10 22 22 C 1.38569 * 119.85343 * 180.25526 * 4 3 2 23 23 C 1.38247 * 119.99749 * 359.47128 * 22 4 3 24 24 C 1.38253 * 120.14426 * 0.50696 * 23 22 4 25 25 C 1.50699 * 119.92435 * 179.74804 * 24 23 22 26 26 O 1.42898 * 109.47265 * 245.02738 * 25 24 23 27 27 Si 1.86302 * 109.47002 * 5.02093 * 25 24 23 28 28 C 1.38240 * 120.14995 * 359.77125 * 24 23 22 29 29 H 1.08998 * 109.46714 * 180.02562 * 1 2 3 30 30 H 1.09001 * 109.47388 * 299.99381 * 1 2 3 31 31 H 1.08998 * 109.47463 * 59.99642 * 1 2 3 32 32 H 1.08995 * 109.46989 * 60.00542 * 6 5 4 33 33 H 1.09000 * 109.46919 * 300.00225 * 6 5 4 34 34 H 0.97006 * 119.99965 * 359.97438 * 9 7 6 35 35 H 1.09004 * 113.61321 * 25.51394 * 12 10 9 36 36 H 1.09003 * 113.61688 * 254.61532 * 12 10 9 37 37 H 1.09002 * 109.47153 * 64.99931 * 15 13 12 38 38 H 1.09001 * 109.46832 * 305.00122 * 15 13 12 39 39 H 1.08004 * 125.96211 * 0.03907 * 17 16 15 40 40 H 1.07997 * 125.52973 * 179.80122 * 19 18 17 41 41 H 1.08998 * 113.61477 * 139.97815 * 21 13 12 42 42 H 1.08992 * 113.61461 * 270.88344 * 21 13 12 43 43 H 1.08001 * 120.00070 * 179.72191 * 22 4 3 44 44 H 1.08001 * 119.92402 * 180.25313 * 23 22 4 45 45 H 1.08996 * 109.47155 * 125.02172 * 25 24 23 46 46 H 0.96696 * 114.00472 * 59.99390 * 26 25 24 47 47 H 1.48502 * 109.99889 * 58.68458 * 27 25 24 48 48 H 1.48501 * 110.00141 * 179.97438 * 27 25 24 49 49 H 1.07998 * 120.00121 * 180.02562 * 28 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2118 0.0000 4 6 3.4359 1.2864 -0.0005 5 8 4.1795 0.1477 -0.0005 6 6 5.6003 0.3009 -0.0005 7 6 6.2519 -1.0580 -0.0012 8 8 5.5671 -2.0589 -0.0011 9 7 7.5957 -1.1609 -0.0008 10 6 8.2291 -2.4819 -0.0008 11 1 7.5836 -3.2609 -0.4065 12 6 9.6471 -2.4851 -0.5959 13 6 10.0314 -3.4627 0.5273 14 1 9.8800 -4.5099 0.2654 15 6 11.4129 -3.1942 1.1275 16 7 11.7355 -4.2426 2.0988 17 6 12.8246 -5.0306 2.1018 18 7 12.7422 -5.8329 3.1319 19 6 11.6159 -5.5938 3.8022 20 7 10.9653 -4.6281 3.2081 21 6 8.8770 -2.8565 1.3427 22 6 4.0602 2.5235 0.0048 23 6 3.3027 3.6800 -0.0004 24 6 1.9222 3.6057 -0.0003 25 6 1.1014 4.8696 -0.0002 26 8 0.3650 4.9592 1.2211 27 14 2.2306 6.3434 -0.1540 28 6 1.2931 2.3748 0.0001 29 1 -0.3633 -1.0277 0.0005 30 1 -0.3634 0.5137 0.8900 31 1 -0.3634 0.5139 -0.8899 32 1 5.9064 0.8506 0.8895 33 1 5.9064 0.8507 -0.8905 34 1 8.1435 -0.3603 -0.0004 35 1 10.1516 -1.5213 -0.5274 36 1 9.7013 -2.9224 -1.5929 37 1 11.4102 -2.2251 1.6265 38 1 12.1598 -3.1921 0.3337 39 1 13.6285 -5.0042 1.3810 40 1 11.2930 -6.1130 4.6925 41 1 8.3095 -3.5936 1.9107 42 1 9.1709 -1.9942 1.9411 43 1 5.1385 2.5842 0.0090 44 1 3.7906 4.6435 -0.0003 45 1 0.4089 4.8531 -0.8418 46 1 0.9185 4.9784 2.0137 47 1 3.0253 6.2461 -1.4047 48 1 1.4332 7.5962 -0.1557 49 1 0.2145 2.3196 -0.0002 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14644236_60476.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:09:46 Heat of formation + Delta-G solvation = 21.556810 kcal Electronic energy + Delta-G solvation = -32741.841900 eV Core-core repulsion = 28061.188466 eV Total energy + Delta-G solvation = -4680.653434 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.167 amu Computer time = 1.47 seconds Orbital eigenvalues (eV) -42.98901 -41.82420 -41.23399 -39.96277 -39.03572 -38.78969 -36.93489 -35.53745 -34.12082 -32.12495 -32.05357 -31.48322 -30.03566 -28.79333 -28.38858 -26.93520 -26.24254 -24.69433 -23.50831 -22.89372 -22.64425 -22.32078 -21.68540 -20.87450 -19.78750 -18.65594 -18.40667 -18.28643 -17.88155 -17.54250 -17.38877 -17.05205 -16.82634 -16.61243 -16.21762 -16.12001 -15.85849 -15.78907 -15.65908 -15.51884 -15.37814 -15.04127 -14.72931 -14.62516 -14.27508 -13.88529 -13.76164 -13.68766 -13.64896 -13.56821 -13.19538 -12.98677 -12.65170 -12.53464 -12.37070 -12.21865 -12.12413 -12.07069 -11.99406 -11.77396 -11.57422 -10.93322 -10.87602 -10.72726 -10.62446 -10.48175 -10.17567 -9.80831 -8.86835 -5.08365 0.15725 0.28022 0.68211 1.24715 1.29269 1.43768 1.47263 1.59253 1.93289 2.06431 2.30823 2.51144 2.55357 3.06473 3.22074 3.36194 3.39880 3.40575 3.49354 3.56135 3.62397 3.73759 3.77352 3.79725 3.89969 3.91493 3.93254 3.97987 4.06816 4.10903 4.23937 4.28290 4.32478 4.37792 4.43901 4.47206 4.52194 4.54403 4.57682 4.64547 4.76405 4.97978 4.98167 5.02644 5.07714 5.30120 5.35243 5.37182 5.49583 5.53783 5.81485 5.94928 6.29577 6.52765 6.53746 7.08466 7.15234 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.302 6.302 3 C 0.107 3.893 4 C 0.104 3.896 5 O -0.277 6.277 6 C 0.038 3.962 7 C 0.516 3.484 8 O -0.507 6.507 9 N -0.718 5.718 10 C 0.124 3.876 11 H 0.118 0.882 12 C -0.136 4.136 13 C -0.120 4.120 14 H 0.101 0.899 15 C 0.141 3.859 16 N -0.380 5.380 17 C 0.252 3.748 18 N -0.547 5.547 19 C 0.197 3.803 20 N -0.312 5.312 21 C -0.135 4.135 22 C -0.169 4.169 23 C -0.112 4.112 24 C -0.115 4.115 25 C -0.066 4.066 26 O -0.540 6.540 27 Si 0.689 3.311 28 C -0.146 4.146 29 H 0.103 0.897 30 H 0.057 0.943 31 H 0.055 0.945 32 H 0.095 0.905 33 H 0.094 0.906 34 H 0.402 0.598 35 H 0.092 0.908 36 H 0.083 0.917 37 H 0.091 0.909 38 H 0.105 0.895 39 H 0.218 0.782 40 H 0.217 0.783 41 H 0.078 0.922 42 H 0.087 0.913 43 H 0.139 0.861 44 H 0.132 0.868 45 H 0.113 0.887 46 H 0.379 0.621 47 H -0.257 1.257 48 H -0.255 1.255 49 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.619 5.371 -1.492 7.915 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.215 6.215 3 C 0.061 3.939 4 C 0.058 3.942 5 O -0.189 6.189 6 C -0.041 4.041 7 C 0.301 3.699 8 O -0.380 6.380 9 N -0.372 5.372 10 C 0.020 3.980 11 H 0.136 0.864 12 C -0.175 4.175 13 C -0.139 4.139 14 H 0.119 0.881 15 C 0.019 3.981 16 N -0.171 5.171 17 C -0.045 4.045 18 N -0.274 5.274 19 C -0.106 4.106 20 N -0.140 5.140 21 C -0.174 4.174 22 C -0.188 4.188 23 C -0.130 4.130 24 C -0.116 4.116 25 C -0.177 4.177 26 O -0.346 6.346 27 Si 0.591 3.409 28 C -0.165 4.165 29 H 0.122 0.878 30 H 0.076 0.924 31 H 0.074 0.926 32 H 0.113 0.887 33 H 0.112 0.888 34 H 0.237 0.763 35 H 0.111 0.889 36 H 0.101 0.899 37 H 0.109 0.891 38 H 0.123 0.877 39 H 0.234 0.766 40 H 0.233 0.767 41 H 0.097 0.903 42 H 0.106 0.894 43 H 0.157 0.843 44 H 0.150 0.850 45 H 0.130 0.870 46 H 0.227 0.773 47 H -0.182 1.182 48 H -0.180 1.180 49 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 4.347 5.038 -2.104 6.979 hybrid contribution 0.042 0.287 -0.504 0.581 sum 4.390 5.325 -2.608 7.377 Atomic orbital electron populations 1.23133 0.78102 1.04430 1.01366 1.86251 1.21350 1.25333 1.88526 1.18287 0.89030 0.85568 1.00983 1.18281 0.88311 0.85774 1.01821 1.86286 1.16034 1.27735 1.88856 1.22490 0.81335 0.96296 1.03955 1.20071 0.82587 0.90557 0.76685 1.90803 1.62615 1.38037 1.46589 1.45776 1.05843 1.09279 1.76289 1.22533 0.92674 0.85525 0.97307 0.86398 1.23387 0.95337 0.99985 0.98799 1.22629 0.93455 1.00647 0.97212 0.88089 1.21862 0.97934 0.88973 0.89368 1.50585 1.16382 1.28803 1.21305 1.26134 0.92127 0.88675 0.97574 1.70565 1.21960 1.27058 1.07782 1.26083 0.89470 0.94639 1.00398 1.78095 1.18747 1.17972 0.99151 1.23469 0.96130 1.01181 0.96604 1.20990 1.00451 0.90678 1.06703 1.20663 0.92740 0.97748 1.01873 1.20038 0.93715 0.95214 1.02640 1.25036 1.00799 1.01651 0.90200 1.86503 1.36372 1.96646 1.15039 0.94759 0.81793 0.76689 0.87706 1.20941 1.00387 0.90426 1.04738 0.87849 0.92412 0.92621 0.88718 0.88820 0.76313 0.88908 0.89851 0.89062 0.87683 0.76557 0.76710 0.90286 0.89406 0.84288 0.85030 0.86980 0.77318 1.18199 1.17968 0.84215 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.01 9.81 101.05 0.99 1.00 16 2 O -0.30 -1.34 10.28 -34.23 -0.35 -1.69 16 3 C 0.11 0.36 6.70 -39.12 -0.26 0.09 16 4 C 0.10 0.27 6.70 -39.12 -0.26 0.00 16 5 O -0.28 -1.05 9.46 -47.36 -0.45 -1.50 16 6 C 0.04 -0.04 5.22 36.01 0.19 0.15 16 7 C 0.52 0.67 7.91 -10.99 -0.09 0.59 16 8 O -0.51 -3.46 16.10 -14.35 -0.23 -3.69 16 9 N -0.72 1.75 5.36 -53.02 -0.28 1.47 16 10 C 0.12 -0.23 4.24 -67.11 -0.28 -0.51 16 11 H 0.12 0.07 7.46 -51.93 -0.39 -0.31 16 12 C -0.14 0.65 7.39 -25.92 -0.19 0.45 16 13 C -0.12 0.39 3.85 -89.81 -0.35 0.05 16 14 H 0.10 -0.18 8.14 -51.93 -0.42 -0.60 16 15 C 0.14 -0.56 6.39 -4.04 -0.03 -0.59 16 16 N -0.38 0.15 3.69 -62.63 -0.23 -0.08 16 17 C 0.25 -0.12 12.63 -90.65 -1.14 -1.26 16 18 N -0.55 -1.45 11.19 -15.83 -0.18 -1.62 16 19 C 0.20 0.41 13.03 -91.81 -1.20 -0.79 16 20 N -0.31 -0.73 12.57 29.29 0.37 -0.36 16 21 C -0.14 0.21 7.43 -25.91 -0.19 0.02 16 22 C -0.17 0.10 9.04 -39.46 -0.36 -0.26 16 23 C -0.11 0.10 8.66 -39.57 -0.34 -0.24 16 24 C -0.12 -0.03 5.35 -104.62 -0.56 -0.59 16 25 C -0.07 0.03 2.80 36.00 0.10 0.13 16 26 O -0.54 -0.02 12.83 -35.23 -0.45 -0.47 16 27 Si 0.69 -1.06 29.79 -169.99 -5.06 -6.12 16 28 C -0.15 -0.22 8.67 -39.46 -0.34 -0.57 16 29 H 0.10 -0.09 8.14 -51.93 -0.42 -0.51 16 30 H 0.06 -0.04 7.66 -51.93 -0.40 -0.43 16 31 H 0.06 -0.04 7.66 -51.93 -0.40 -0.44 16 32 H 0.10 -0.37 7.65 -51.93 -0.40 -0.76 16 33 H 0.09 -0.36 7.67 -51.93 -0.40 -0.76 16 34 H 0.40 -2.41 8.73 -40.82 -0.36 -2.77 16 35 H 0.09 -0.61 8.08 -51.93 -0.42 -1.03 16 36 H 0.08 -0.39 8.14 -51.93 -0.42 -0.81 16 37 H 0.09 -0.41 7.84 -51.93 -0.41 -0.82 16 38 H 0.11 -0.72 8.09 -51.93 -0.42 -1.14 16 39 H 0.22 -1.07 8.06 -52.48 -0.42 -1.49 16 40 H 0.22 -0.17 8.06 -52.49 -0.42 -0.60 16 41 H 0.08 0.08 8.14 -51.93 -0.42 -0.34 16 42 H 0.09 -0.18 7.90 -51.93 -0.41 -0.59 16 43 H 0.14 -0.54 6.30 -52.49 -0.33 -0.87 16 44 H 0.13 -0.44 4.89 -52.49 -0.26 -0.70 16 45 H 0.11 0.00 7.96 -51.93 -0.41 -0.41 16 46 H 0.38 -1.43 8.70 45.56 0.40 -1.03 16 47 H -0.26 -0.18 7.11 56.52 0.40 0.22 16 48 H -0.25 -0.46 7.11 56.52 0.40 -0.06 16 49 H 0.14 0.08 6.30 -52.49 -0.33 -0.25 16 LS Contribution 412.89 15.07 6.22 6.22 Total: 0.00 -15.03 412.89 -11.62 -26.66 By element: Atomic # 1 Polarization: -9.84 SS G_CDS: -6.66 Total: -16.50 kcal Atomic # 6 Polarization: 2.00 SS G_CDS: -4.31 Total: -2.31 kcal Atomic # 7 Polarization: -0.27 SS G_CDS: -0.32 Total: -0.59 kcal Atomic # 8 Polarization: -5.87 SS G_CDS: -1.48 Total: -7.35 kcal Atomic # 14 Polarization: -1.06 SS G_CDS: -5.06 Total: -6.12 kcal Total LS contribution 6.22 Total: 6.22 kcal Total: -15.03 -11.62 -26.66 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14644236_60476.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 48.216 kcal (2) G-P(sol) polarization free energy of solvation -15.035 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 33.181 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.624 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.659 kcal (6) G-S(sol) free energy of system = (1) + (5) 21.557 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.48 seconds