Wall clock time and date at job start Sun Mar 7 2021 00:09:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42909 * 1 3 3 Si 1.86301 * 109.46621 * 2 1 4 4 C 1.50700 * 109.47285 * 119.99704 * 2 1 3 5 5 C 1.38235 * 119.93727 * 65.00222 * 4 2 1 6 6 C 1.38190 * 120.06842 * 179.97438 * 5 4 2 7 7 C 1.38680 * 119.95396 * 0.02707 * 6 5 4 8 8 O 1.35914 * 120.05743 * 179.97438 * 7 6 5 9 9 C 1.42907 * 117.00158 * 0.02562 * 8 7 6 10 10 C 1.50699 * 109.47363 * 179.97438 * 9 8 7 11 11 O 1.21289 * 119.99878 * 0.02562 * 10 9 8 12 12 N 1.34774 * 120.00483 * 180.02562 * 10 9 8 13 13 C 1.46496 * 120.00553 * 180.02562 * 12 10 9 14 14 H 1.09007 * 112.84791 * 23.79948 * 13 12 10 15 15 C 1.53779 * 113.61728 * 154.99579 * 13 12 10 16 16 C 1.53780 * 87.07907 * 139.97941 * 15 13 12 17 17 H 1.09005 * 113.61064 * 89.12037 * 16 15 13 18 18 C 1.52997 * 113.61726 * 220.02022 * 16 15 13 19 19 N 1.46501 * 109.47187 * 185.00405 * 18 16 15 20 20 C 1.34435 * 126.81938 * 124.70696 * 19 18 16 21 21 N 1.30831 * 108.07235 * 179.89101 * 20 19 18 22 22 C 1.33243 * 109.82951 * 0.38548 * 21 20 19 23 23 N 1.30714 * 108.94818 * 359.75826 * 22 21 20 24 24 C 1.53772 * 113.61428 * 252.49826 * 13 12 10 25 25 C 1.38832 * 119.88322 * 359.97438 * 7 6 5 26 26 Br 1.89100 * 120.03416 * 180.02562 * 25 7 6 27 27 C 1.38193 * 119.92698 * 0.27327 * 25 7 6 28 28 H 0.96694 * 113.99760 * 299.99464 * 1 2 3 29 29 H 1.08996 * 109.46897 * 240.00391 * 2 1 3 30 30 H 1.48503 * 109.99926 * 178.68484 * 3 2 1 31 31 H 1.48501 * 110.00072 * 299.99677 * 3 2 1 32 32 H 1.07996 * 119.96815 * 0.02562 * 5 4 2 33 33 H 1.08003 * 120.02514 * 179.97438 * 6 5 4 34 34 H 1.08994 * 109.47381 * 300.00317 * 9 8 7 35 35 H 1.09001 * 109.46795 * 60.00264 * 9 8 7 36 36 H 0.97004 * 119.99347 * 359.97438 * 12 10 9 37 37 H 1.08995 * 113.61682 * 254.53568 * 15 13 12 38 38 H 1.09006 * 113.61346 * 25.43486 * 15 13 12 39 39 H 1.09006 * 109.47120 * 305.00397 * 18 16 15 40 40 H 1.08996 * 109.47471 * 64.99817 * 18 16 15 41 41 H 1.07998 * 125.96046 * 0.04325 * 20 19 18 42 42 H 1.08001 * 125.52382 * 179.79917 * 22 21 20 43 43 H 1.08999 * 113.61770 * 334.56722 * 24 13 12 44 44 H 1.09008 * 113.61712 * 105.46646 * 24 13 12 45 45 H 1.07997 * 119.97783 * 179.72813 * 27 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9315 -0.7103 1.2305 5 6 1.6842 -2.0601 1.3971 6 6 2.1440 -2.7143 2.5242 7 6 2.8538 -2.0156 3.4891 8 8 3.3067 -2.6568 4.5987 9 6 3.0158 -4.0519 4.7059 10 6 3.5928 -4.5880 5.9908 11 8 4.1934 -3.8481 6.7410 12 7 3.4413 -5.8895 6.3062 13 6 4.0016 -6.4105 7.5554 14 1 4.1393 -5.6381 8.3122 15 6 3.2804 -7.6639 8.0786 16 6 4.6681 -8.2088 8.4558 17 1 4.9892 -7.9287 9.4591 18 6 4.8381 -9.7025 8.1714 19 7 6.1405 -10.1497 8.6715 20 6 6.3704 -11.1546 9.5343 21 7 7.6620 -11.2377 9.7257 22 6 8.2858 -10.3014 9.0119 23 7 7.3963 -9.6097 8.3495 24 6 5.2373 -7.3027 7.3514 25 6 3.1011 -0.6600 3.3198 26 35 4.0691 0.2968 4.6326 27 6 2.6345 -0.0096 2.1933 28 1 -0.3933 0.4416 0.7651 29 1 1.7924 -0.5138 -0.8900 30 1 3.5346 1.7705 0.0320 31 1 1.5614 2.4679 -1.2085 32 1 1.1317 -2.6042 0.6454 33 1 1.9501 -3.7689 2.6538 34 1 1.9359 -4.1992 4.7028 35 1 3.4572 -4.5809 3.8613 36 1 2.9606 -6.4811 5.7063 37 1 2.6384 -7.4715 8.9381 38 1 2.7829 -8.2393 7.2978 39 1 4.0460 -10.2600 8.6714 40 1 4.7822 -9.8765 7.0969 41 1 5.6201 -11.7850 9.9881 42 1 9.3535 -10.1406 8.9846 43 1 5.2749 -7.7793 6.3718 44 1 6.1752 -6.8187 7.6239 45 1 2.8225 1.0459 2.0629 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14644236_6201210.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:09:50 Heat of formation + Delta-G solvation = 57.837150 kcal Electronic energy + Delta-G solvation = -30343.799786 eV Core-core repulsion = 25799.121394 eV Total energy + Delta-G solvation = -4544.678392 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 423.063 amu Computer time = 1.34 seconds Orbital eigenvalues (eV) -42.96944 -41.73858 -41.05842 -39.77675 -38.92163 -37.21218 -35.49617 -34.10851 -33.49650 -32.15519 -32.13665 -30.59893 -29.85513 -28.63435 -26.72873 -26.38780 -24.70845 -23.83019 -22.85386 -22.60726 -22.24356 -21.68546 -20.70200 -19.57052 -18.54468 -18.33567 -18.02432 -17.52907 -17.44437 -16.96770 -16.70699 -16.50317 -16.11287 -15.99779 -15.78702 -15.63839 -15.59205 -15.23942 -14.98156 -14.78328 -14.53514 -14.30509 -14.08807 -13.88717 -13.68448 -13.45473 -13.44347 -13.17190 -12.88460 -12.43317 -12.29705 -12.21615 -12.19048 -11.92508 -11.88739 -11.87068 -11.41738 -11.21370 -11.01089 -10.95403 -10.78493 -10.55713 -10.46370 -10.13184 -10.00745 -9.33067 -5.04170 -0.04525 0.07293 0.62780 0.71557 1.27825 1.39743 1.41926 1.49783 1.59057 1.92532 2.02010 2.38787 2.50729 3.31026 3.42457 3.47448 3.48429 3.54898 3.56551 3.65766 3.74258 3.78363 3.83101 3.93769 4.01432 4.06592 4.07808 4.13104 4.20559 4.32843 4.34587 4.44397 4.58026 4.62569 4.71237 4.71860 4.77744 4.81166 4.96984 5.02293 5.05142 5.14744 5.29199 5.34892 5.44441 5.46294 5.52516 5.97138 6.04629 6.45027 6.76699 7.13672 7.14788 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.550 6.550 2 C -0.052 4.052 3 Si 0.742 3.258 4 C -0.152 4.152 5 C -0.033 4.033 6 C -0.195 4.195 7 C 0.149 3.851 8 O -0.305 6.305 9 C 0.033 3.967 10 C 0.510 3.490 11 O -0.572 6.572 12 N -0.697 5.697 13 C 0.115 3.885 14 H 0.085 0.915 15 C -0.109 4.109 16 C -0.114 4.114 17 H 0.081 0.919 18 C 0.135 3.865 19 N -0.379 5.379 20 C 0.256 3.744 21 N -0.587 5.587 22 C 0.182 3.818 23 N -0.345 5.345 24 C -0.137 4.137 25 C -0.141 4.141 26 Br -0.050 7.050 27 C -0.053 4.053 28 H 0.396 0.604 29 H 0.119 0.881 30 H -0.290 1.290 31 H -0.292 1.292 32 H 0.156 0.844 33 H 0.174 0.826 34 H 0.133 0.867 35 H 0.128 0.872 36 H 0.423 0.577 37 H 0.090 0.910 38 H 0.126 0.874 39 H 0.145 0.855 40 H 0.102 0.898 41 H 0.260 0.740 42 H 0.228 0.772 43 H 0.097 0.903 44 H 0.040 0.960 45 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.806 -7.108 -2.110 12.293 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.358 6.358 2 C -0.164 4.164 3 Si 0.649 3.351 4 C -0.154 4.154 5 C -0.052 4.052 6 C -0.214 4.214 7 C 0.101 3.899 8 O -0.218 6.218 9 C -0.044 4.044 10 C 0.297 3.703 11 O -0.450 6.450 12 N -0.351 5.351 13 C 0.010 3.990 14 H 0.103 0.897 15 C -0.148 4.148 16 C -0.134 4.134 17 H 0.099 0.901 18 C 0.014 3.986 19 N -0.170 5.170 20 C -0.040 4.040 21 N -0.315 5.315 22 C -0.120 4.120 23 N -0.173 5.173 24 C -0.175 4.175 25 C -0.221 4.221 26 Br 0.035 6.965 27 C -0.073 4.073 28 H 0.246 0.754 29 H 0.136 0.864 30 H -0.217 1.217 31 H -0.219 1.219 32 H 0.174 0.826 33 H 0.191 0.809 34 H 0.151 0.849 35 H 0.145 0.855 36 H 0.262 0.738 37 H 0.108 0.892 38 H 0.144 0.856 39 H 0.163 0.837 40 H 0.121 0.879 41 H 0.276 0.724 42 H 0.244 0.756 43 H 0.115 0.885 44 H 0.059 0.941 45 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges -8.097 -5.466 -2.182 10.010 hybrid contribution 0.251 -0.692 -0.488 0.884 sum -7.845 -6.159 -2.670 10.325 Atomic orbital electron populations 1.86478 1.16755 1.81984 1.50586 1.24819 0.85423 1.09207 0.96907 0.94026 0.78444 0.77113 0.85539 1.20302 1.02095 0.95638 0.97333 1.21222 0.94448 0.93125 0.96369 1.21610 1.02646 1.02350 0.94747 1.18818 0.93610 0.90603 0.86875 1.86249 1.73473 1.23447 1.38611 1.22853 1.04071 0.80378 0.97104 1.20594 0.79459 0.82911 0.87380 1.90794 1.42707 1.58674 1.52806 1.45628 1.57400 1.08616 1.23428 1.22486 0.95130 0.95006 0.86380 0.89657 1.23300 0.94972 0.93691 1.02827 1.22503 0.98272 0.93421 0.99158 0.90102 1.22239 0.78965 0.95133 1.02221 1.50791 1.06995 1.25075 1.34094 1.26925 0.95099 0.91152 0.90813 1.70538 1.05895 1.26684 1.28347 1.26417 1.01903 0.90719 0.92991 1.78009 0.90068 1.23564 1.25659 1.23451 0.97134 0.97207 0.99755 1.21149 1.09198 0.93148 0.98567 1.96778 1.73080 1.73413 1.53235 1.20912 0.95477 0.99873 0.91009 0.75408 0.86394 1.21716 1.21938 0.82615 0.80899 0.84927 0.85478 0.73790 0.89154 0.85619 0.83707 0.87938 0.72413 0.75611 0.88491 0.94138 0.83524 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.68 12.83 -148.98 -1.91 -0.23 16 2 C -0.05 0.16 2.80 71.24 0.20 0.36 16 3 Si 0.74 -1.27 29.80 68.60 2.04 0.77 16 4 C -0.15 0.35 5.35 -19.85 -0.11 0.25 16 5 C -0.03 0.15 9.68 22.26 0.22 0.37 16 6 C -0.19 0.96 9.04 22.36 0.20 1.16 16 7 C 0.15 0.29 6.68 22.52 0.15 0.44 16 8 O -0.31 -1.36 9.01 -73.55 -0.66 -2.03 16 9 C 0.03 -0.18 5.22 71.24 0.37 0.19 16 10 C 0.51 0.66 7.91 87.66 0.69 1.36 16 11 O -0.57 -8.14 16.10 15.98 0.26 -7.88 16 12 N -0.70 4.68 5.35 -440.05 -2.36 2.33 16 13 C 0.12 -0.46 4.24 45.51 0.19 -0.27 16 14 H 0.09 0.28 7.46 -2.38 -0.02 0.26 16 15 C -0.11 1.32 7.39 31.12 0.23 1.55 16 16 C -0.11 0.84 3.85 -10.27 -0.04 0.80 16 17 H 0.08 -0.24 8.14 -2.38 -0.02 -0.25 16 18 C 0.13 -1.40 6.39 86.38 0.55 -0.84 16 19 N -0.38 0.61 3.69 -352.06 -1.30 -0.69 16 20 C 0.26 -0.53 12.63 180.36 2.28 1.75 16 21 N -0.59 -3.33 11.19 -204.00 -2.28 -5.61 16 22 C 0.18 1.01 13.03 180.76 2.36 3.36 16 23 N -0.34 -1.96 12.57 -61.24 -0.77 -2.73 16 24 C -0.14 0.37 7.43 31.12 0.23 0.60 16 25 C -0.14 -0.62 6.24 22.40 0.14 -0.48 16 26 Br -0.05 -0.41 33.16 -20.37 -0.68 -1.09 16 27 C -0.05 -0.03 8.40 22.27 0.19 0.16 16 28 H 0.40 -4.10 8.70 -74.06 -0.64 -4.75 16 29 H 0.12 -0.38 7.96 -2.39 -0.02 -0.40 16 30 H -0.29 -1.25 7.11 99.48 0.71 -0.55 16 31 H -0.29 -1.54 7.11 99.48 0.71 -0.83 16 32 H 0.16 -1.28 8.06 -2.91 -0.02 -1.30 16 33 H 0.17 -2.18 6.30 -2.91 -0.02 -2.20 16 34 H 0.13 -1.69 7.66 -2.39 -0.02 -1.71 16 35 H 0.13 -1.50 7.66 -2.39 -0.02 -1.51 16 36 H 0.42 -6.58 8.73 -92.70 -0.81 -7.39 16 37 H 0.09 -1.10 8.14 -2.39 -0.02 -1.12 16 38 H 0.13 -2.28 8.08 -2.38 -0.02 -2.30 16 39 H 0.15 -2.61 8.09 -2.38 -0.02 -2.63 16 40 H 0.10 -1.23 7.84 -2.39 -0.02 -1.25 16 41 H 0.26 -3.29 8.06 -2.91 -0.02 -3.31 16 42 H 0.23 0.10 8.06 -2.91 -0.02 0.07 16 43 H 0.10 -0.47 7.90 -2.39 -0.02 -0.49 16 44 H 0.04 0.21 8.14 -2.38 -0.02 0.19 16 45 H 0.15 -0.26 4.91 -2.91 -0.01 -0.28 16 Total: 0.00 -37.99 404.07 -0.15 -38.14 By element: Atomic # 1 Polarization: -31.40 SS G_CDS: -0.35 Total: -31.75 kcal Atomic # 6 Polarization: 2.91 SS G_CDS: 7.85 Total: 10.77 kcal Atomic # 7 Polarization: 0.01 SS G_CDS: -6.71 Total: -6.70 kcal Atomic # 8 Polarization: -7.82 SS G_CDS: -2.32 Total: -10.14 kcal Atomic # 14 Polarization: -1.27 SS G_CDS: 2.04 Total: 0.77 kcal Atomic # 35 Polarization: -0.41 SS G_CDS: -0.68 Total: -1.09 kcal Total: -37.99 -0.15 -38.14 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14644236_6201210.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 95.979 kcal (2) G-P(sol) polarization free energy of solvation -37.987 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 57.992 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.155 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.142 kcal (6) G-S(sol) free energy of system = (1) + (5) 57.837 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.34 seconds