Wall clock time and date at job start Sun Mar 7 2021 00:09:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46899 * 1 3 3 C 1.46901 * 110.99813 * 2 1 4 4 C 1.50706 * 109.47357 * 66.04397 * 3 2 1 5 5 O 1.21281 * 119.99922 * 359.97438 * 4 3 2 6 6 N 1.34779 * 119.99749 * 179.97438 * 4 3 2 7 7 C 1.46494 * 119.99525 * 179.97438 * 6 4 3 8 8 H 1.09000 * 112.91148 * 23.75262 * 7 6 4 9 9 C 1.53786 * 113.61370 * 155.00031 * 7 6 4 10 10 C 1.53781 * 87.17350 * 140.02367 * 9 7 6 11 11 H 1.08999 * 113.61567 * 89.07405 * 10 9 7 12 12 C 1.52991 * 113.61529 * 219.97788 * 10 9 7 13 13 N 1.46508 * 109.47429 * 184.99923 * 12 10 9 14 14 C 1.34424 * 126.81943 * 124.99883 * 13 12 10 15 15 N 1.30835 * 108.07284 * 179.97438 * 14 13 12 16 16 C 1.33242 * 109.83040 * 0.02562 * 15 14 13 17 17 N 1.30711 * 108.94257 * 359.75478 * 16 15 14 18 18 C 1.53781 * 87.08070 * 334.52830 * 10 9 7 19 19 C 1.39674 * 111.00445 * 236.04322 * 2 1 3 20 20 C 1.38891 * 120.07440 * 243.67820 * 19 2 1 21 21 C 1.50697 * 120.03866 * 0.02562 * 20 19 2 22 22 O 1.42901 * 109.47149 * 74.99690 * 21 20 19 23 23 Si 1.86298 * 109.47081 * 194.99841 * 21 20 19 24 24 C 1.38119 * 119.92024 * 179.74174 * 20 19 2 25 25 C 1.38269 * 120.07756 * 0.53725 * 24 20 19 26 26 C 1.50704 * 119.92335 * 179.76556 * 25 24 20 27 27 F 1.39897 * 109.46752 * 179.97438 * 26 25 24 28 28 F 1.39895 * 109.47304 * 299.97078 * 26 25 24 29 29 F 1.39896 * 109.47288 * 59.97782 * 26 25 24 30 30 C 1.38305 * 120.14843 * 359.73574 * 25 24 20 31 31 C 1.38082 * 120.07128 * 359.97438 * 30 25 24 32 32 H 1.08995 * 109.46970 * 60.00059 * 1 2 3 33 33 H 1.09001 * 109.46976 * 180.02562 * 1 2 3 34 34 H 1.09000 * 109.47092 * 300.00310 * 1 2 3 35 35 H 1.09001 * 109.47242 * 306.04533 * 3 2 1 36 36 H 1.09005 * 109.47165 * 186.04421 * 3 2 1 37 37 H 0.97000 * 119.99938 * 359.97438 * 6 4 3 38 38 H 1.09002 * 113.61357 * 25.43283 * 9 7 6 39 39 H 1.09002 * 113.61608 * 254.61445 * 9 7 6 40 40 H 1.08997 * 109.47550 * 304.99814 * 12 10 9 41 41 H 1.09002 * 109.47334 * 65.00084 * 12 10 9 42 42 H 1.07995 * 125.96658 * 0.02562 * 14 13 12 43 43 H 1.08000 * 125.52878 * 179.97438 * 16 15 14 44 44 H 1.09005 * 113.61471 * 139.98321 * 18 10 9 45 45 H 1.08996 * 113.61178 * 270.79663 * 18 10 9 46 46 H 1.08996 * 109.47314 * 315.00325 * 21 20 19 47 47 H 0.96704 * 113.99937 * 59.99960 * 22 21 20 48 48 H 1.48504 * 109.99829 * 180.02562 * 23 21 20 49 49 H 1.48493 * 110.00220 * 301.31997 * 23 21 20 50 50 H 1.08004 * 119.96432 * 180.27392 * 24 20 19 51 51 H 1.07993 * 119.96060 * 180.02562 * 30 25 24 52 52 H 1.08009 * 120.03305 * 179.97438 * 31 30 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9954 1.3715 0.0000 4 6 1.6368 2.0472 1.2985 5 8 1.0046 1.4458 2.1407 6 7 2.0188 3.3200 1.5236 7 6 1.6697 3.9770 2.7856 8 1 1.4864 3.2707 3.5952 9 6 2.6243 5.1199 3.1697 10 6 1.3829 5.8973 3.6383 11 1 1.1212 5.7149 4.6805 12 6 1.4226 7.3855 3.2859 13 7 0.2616 8.0579 3.8744 14 6 0.2774 9.1253 4.6914 15 7 -0.9601 9.4217 4.9959 16 6 -1.7899 8.5695 4.3953 17 7 -1.0890 7.7185 3.6931 18 6 0.5734 5.0498 2.6426 19 6 1.9696 -0.7283 -1.0816 20 6 2.7167 -1.8781 -0.8603 21 6 2.9879 -2.3423 0.5475 22 8 1.8043 -2.9298 1.0917 23 14 4.3575 -3.6051 0.5321 24 6 3.2057 -2.5989 -1.9323 25 6 2.9617 -2.1709 -3.2242 26 6 3.5015 -2.9570 -4.3912 27 9 3.1276 -2.3334 -5.5863 28 9 4.8970 -3.0123 -4.3108 29 9 2.9807 -4.2551 -4.3598 30 6 2.2230 -1.0232 -3.4479 31 6 1.7261 -0.3012 -2.3809 32 1 -0.3633 0.5138 -0.8900 33 1 -0.3633 -1.0277 0.0005 34 1 -0.3633 0.5139 0.8900 35 1 1.5610 1.9274 -0.8309 36 1 3.0797 1.3445 -0.1082 37 1 2.5248 3.8009 0.8501 38 1 3.1274 5.5741 2.3160 39 1 3.3096 4.8636 3.9776 40 1 2.3373 7.8281 3.6803 41 1 1.3999 7.5031 2.2024 42 1 1.1577 9.6475 5.0358 43 1 -2.8670 8.5823 4.4731 44 1 -0.3977 4.7356 3.0251 45 1 0.5146 5.4856 1.6452 46 1 3.2853 -1.4910 1.1598 47 1 1.4814 -3.6949 0.5962 48 1 4.6341 -4.0712 1.9146 49 1 3.9771 -4.7565 -0.3250 50 1 3.7829 -3.4956 -1.7611 51 1 2.0340 -0.6919 -4.4582 52 1 1.1497 0.5952 -2.5563 There are 78 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 78 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14644236_6406254.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:09:54 Heat of formation + Delta-G solvation = -38.649984 kcal Electronic energy + Delta-G solvation = -41057.035625 eV Core-core repulsion = 35226.272737 eV Total energy + Delta-G solvation = -5830.762888 eV No. of doubly occupied orbitals = 78 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 426.167 amu Computer time = 1.79 seconds Orbital eigenvalues (eV) -51.21494 -48.74078 -48.67793 -42.96410 -41.75691 -40.98188 -39.61318 -37.83569 -37.53444 -35.40770 -33.99631 -33.02151 -32.14745 -32.10271 -29.84898 -28.59688 -27.58780 -27.00837 -26.69183 -25.28227 -24.32119 -23.27937 -22.84923 -22.41036 -21.96836 -21.50820 -20.58932 -19.66406 -19.53660 -19.43005 -18.46175 -18.35149 -17.82584 -17.54825 -17.19177 -16.98244 -16.73295 -16.51011 -16.22640 -16.11243 -15.92844 -15.69809 -15.58472 -15.55283 -15.43683 -15.19265 -15.11695 -15.04385 -14.86579 -14.83713 -14.79254 -14.64759 -14.41512 -14.24918 -13.96753 -13.71875 -13.59399 -13.42061 -13.28482 -13.22716 -12.93416 -12.83984 -12.76678 -12.63823 -12.23216 -12.16094 -11.87458 -11.80160 -11.38294 -10.97417 -10.85050 -10.77635 -10.58094 -10.54424 -10.22182 -10.10564 -9.99759 -9.54653 -5.00175 -0.33622 0.01504 0.72155 1.24742 1.47838 1.50284 1.58778 1.63067 1.90811 1.99880 2.02771 2.18641 2.63478 2.78187 2.93473 3.33354 3.34206 3.42728 3.48141 3.55274 3.60780 3.63907 3.67393 3.75992 3.79090 3.96058 4.04984 4.05091 4.12453 4.13881 4.20221 4.24552 4.32776 4.36611 4.42805 4.46627 4.55421 4.58870 4.65001 4.73857 4.75252 4.83564 4.90975 4.98533 4.99254 5.02527 5.07333 5.17700 5.24350 5.36853 5.41178 5.47100 5.60513 5.66663 5.97336 6.17454 6.53408 6.60762 7.15288 7.32157 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 N -0.500 5.500 3 C 0.038 3.962 4 C 0.511 3.489 5 O -0.566 6.566 6 N -0.706 5.706 7 C 0.118 3.882 8 H 0.084 0.916 9 C -0.112 4.112 10 C -0.114 4.114 11 H 0.080 0.920 12 C 0.135 3.865 13 N -0.379 5.379 14 C 0.256 3.744 15 N -0.586 5.586 16 C 0.182 3.818 17 N -0.344 5.344 18 C -0.134 4.134 19 C 0.143 3.857 20 C -0.096 4.096 21 C -0.057 4.057 22 O -0.535 6.535 23 Si 0.750 3.250 24 C -0.069 4.069 25 C -0.186 4.186 26 C 0.508 3.492 27 F -0.177 7.177 28 F -0.177 7.177 29 F -0.185 7.185 30 C -0.051 4.051 31 C -0.142 4.142 32 H 0.045 0.955 33 H 0.061 0.939 34 H 0.072 0.928 35 H 0.098 0.902 36 H 0.131 0.869 37 H 0.419 0.581 38 H 0.122 0.878 39 H 0.087 0.913 40 H 0.144 0.856 41 H 0.102 0.898 42 H 0.260 0.740 43 H 0.228 0.772 44 H 0.040 0.960 45 H 0.094 0.906 46 H 0.119 0.881 47 H 0.380 0.620 48 H -0.301 1.301 49 H -0.277 1.277 50 H 0.144 0.856 51 H 0.157 0.843 52 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.412 6.788 -4.284 10.926 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.112 4.112 2 N -0.221 5.221 3 C -0.091 4.091 4 C 0.298 3.702 5 O -0.444 6.444 6 N -0.359 5.359 7 C 0.012 3.988 8 H 0.102 0.898 9 C -0.151 4.151 10 C -0.134 4.134 11 H 0.098 0.902 12 C 0.015 3.985 13 N -0.169 5.169 14 C -0.040 4.040 15 N -0.314 5.314 16 C -0.120 4.120 17 N -0.172 5.172 18 C -0.173 4.173 19 C 0.049 3.951 20 C -0.098 4.098 21 C -0.167 4.167 22 O -0.342 6.342 23 Si 0.655 3.345 24 C -0.087 4.087 25 C -0.187 4.187 26 C 0.454 3.546 27 F -0.158 7.158 28 F -0.158 7.158 29 F -0.166 7.166 30 C -0.070 4.070 31 C -0.162 4.162 32 H 0.063 0.937 33 H 0.080 0.920 34 H 0.090 0.910 35 H 0.115 0.885 36 H 0.149 0.851 37 H 0.257 0.743 38 H 0.141 0.859 39 H 0.106 0.894 40 H 0.161 0.839 41 H 0.120 0.880 42 H 0.275 0.725 43 H 0.244 0.756 44 H 0.059 0.941 45 H 0.113 0.887 46 H 0.137 0.863 47 H 0.228 0.772 48 H -0.229 1.229 49 H -0.204 1.204 50 H 0.161 0.839 51 H 0.175 0.825 52 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges 7.094 5.426 -2.916 9.395 hybrid contribution -1.442 -0.405 -0.909 1.752 sum 5.652 5.021 -3.825 8.473 Atomic orbital electron populations 1.22442 0.84641 1.02466 1.01628 1.59079 1.09416 1.13053 1.40574 1.22209 1.03877 0.88053 0.94990 1.20894 0.78498 0.81828 0.88992 1.90728 1.40692 1.65155 1.47867 1.45793 1.57403 1.13005 1.19688 1.22420 0.96885 0.92616 0.86854 0.89797 1.23289 0.95298 0.93382 1.03092 1.22494 0.98426 0.92963 0.99477 0.90208 1.22229 0.84428 0.91634 1.00249 1.50787 1.05789 1.23978 1.36374 1.26913 0.98499 0.88281 0.90347 1.70539 1.01208 1.30351 1.29345 1.26423 1.02285 0.89884 0.93448 1.78000 0.88395 1.25102 1.25738 1.23463 0.97366 0.96427 1.00036 1.18850 0.94127 0.93150 0.88951 1.20109 0.98859 0.95356 0.95454 1.24932 0.94613 1.04949 0.92161 1.86704 1.42720 1.48961 1.55829 0.94546 0.83188 0.78554 0.78179 1.20877 0.97741 0.99415 0.90679 1.19918 1.06799 0.99724 0.92253 1.18386 0.75775 0.77654 0.82821 1.93175 1.91207 1.82225 1.49218 1.93231 1.29909 1.96331 1.96338 1.93221 1.86658 1.40110 1.96635 1.21134 0.92891 0.91611 1.01350 1.21903 1.00978 1.01737 0.91579 0.93679 0.91987 0.90982 0.88451 0.85129 0.74330 0.85940 0.89447 0.83859 0.88028 0.72483 0.75562 0.94149 0.88740 0.86341 0.77223 1.22925 1.20366 0.83893 0.82543 0.82581 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.07 8.94 127.69 1.14 1.21 16 2 N -0.50 0.11 3.71 -724.43 -2.69 -2.58 16 3 C 0.04 -0.22 5.03 85.56 0.43 0.21 16 4 C 0.51 -0.07 7.56 87.66 0.66 0.60 16 5 O -0.57 -6.18 13.91 -3.03 -0.04 -6.23 16 6 N -0.71 4.66 5.36 -439.60 -2.36 2.30 16 7 C 0.12 -0.47 4.25 45.61 0.19 -0.28 16 8 H 0.08 0.27 7.47 -2.39 -0.02 0.25 16 9 C -0.11 1.27 7.39 31.12 0.23 1.50 16 10 C -0.11 0.81 3.86 -10.27 -0.04 0.77 16 11 H 0.08 -0.21 8.14 -2.39 -0.02 -0.23 16 12 C 0.13 -1.35 6.39 86.37 0.55 -0.80 16 13 N -0.38 0.57 3.69 -352.06 -1.30 -0.72 16 14 C 0.26 -0.50 12.63 180.36 2.28 1.78 16 15 N -0.59 -3.29 11.19 -204.01 -2.28 -5.57 16 16 C 0.18 0.97 13.03 180.77 2.36 3.32 16 17 N -0.34 -1.89 12.57 -61.25 -0.77 -2.66 16 18 C -0.13 0.39 7.44 31.21 0.23 0.62 16 19 C 0.14 -0.32 4.65 38.21 0.18 -0.15 16 20 C -0.10 0.12 5.27 -19.74 -0.10 0.01 16 21 C -0.06 -0.05 2.34 71.23 0.17 0.12 16 22 O -0.54 -2.67 12.88 -148.98 -1.92 -4.59 16 23 Si 0.75 -0.52 30.26 68.60 2.08 1.55 16 24 C -0.07 0.12 8.20 22.25 0.18 0.30 16 25 C -0.19 0.31 5.37 -19.84 -0.11 0.20 16 26 C 0.51 0.44 3.31 71.24 0.24 0.67 16 27 F -0.18 -0.19 15.96 44.97 0.72 0.53 16 28 F -0.18 -0.32 17.24 44.97 0.78 0.45 16 29 F -0.18 -0.68 17.23 44.97 0.78 0.09 16 30 C -0.05 0.25 9.42 22.25 0.21 0.46 16 31 C -0.14 0.83 8.70 22.40 0.19 1.03 16 32 H 0.04 -0.11 7.47 -2.39 -0.02 -0.13 16 33 H 0.06 0.25 8.12 -2.39 -0.02 0.23 16 34 H 0.07 0.53 5.88 -2.39 -0.01 0.52 16 35 H 0.10 -1.10 7.48 -2.39 -0.02 -1.12 16 36 H 0.13 -1.34 8.06 -2.38 -0.02 -1.36 16 37 H 0.42 -5.94 8.73 -92.71 -0.81 -6.75 16 38 H 0.12 -2.08 8.08 -2.39 -0.02 -2.10 16 39 H 0.09 -0.98 8.14 -2.39 -0.02 -1.00 16 40 H 0.14 -2.50 8.09 -2.39 -0.02 -2.52 16 41 H 0.10 -1.17 7.84 -2.39 -0.02 -1.19 16 42 H 0.26 -3.22 8.06 -2.91 -0.02 -3.24 16 43 H 0.23 0.02 8.06 -2.91 -0.02 0.00 16 44 H 0.04 0.19 8.14 -2.38 -0.02 0.17 16 45 H 0.09 -0.45 7.89 -2.39 -0.02 -0.47 16 46 H 0.12 0.23 7.78 -2.39 -0.02 0.21 16 47 H 0.38 -0.38 8.70 -74.05 -0.64 -1.03 16 48 H -0.30 -2.27 7.11 99.48 0.71 -1.56 16 49 H -0.28 -0.63 6.68 99.48 0.66 0.04 16 50 H 0.14 -0.36 4.87 -2.91 -0.01 -0.37 16 51 H 0.16 -1.22 7.15 -2.91 -0.02 -1.24 16 52 H 0.16 -1.60 7.16 -2.91 -0.02 -1.62 16 Total: 0.00 -31.88 442.88 1.53 -30.35 By element: Atomic # 1 Polarization: -24.07 SS G_CDS: -0.44 Total: -24.51 kcal Atomic # 6 Polarization: 2.58 SS G_CDS: 8.99 Total: 11.57 kcal Atomic # 7 Polarization: 0.17 SS G_CDS: -9.40 Total: -9.23 kcal Atomic # 8 Polarization: -8.86 SS G_CDS: -1.96 Total: -10.82 kcal Atomic # 9 Polarization: -1.19 SS G_CDS: 2.27 Total: 1.08 kcal Atomic # 14 Polarization: -0.52 SS G_CDS: 2.08 Total: 1.55 kcal Total: -31.88 1.53 -30.35 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14644236_6406254.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -8.297 kcal (2) G-P(sol) polarization free energy of solvation -31.884 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -40.182 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.532 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.353 kcal (6) G-S(sol) free energy of system = (1) + (5) -38.650 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.79 seconds