Wall clock time and date at job start Sun Mar 7 2021 00:09:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86301 * 109.47159 * 2 1 4 4 C 1.50700 * 109.47509 * 119.99740 * 2 1 3 5 5 C 1.35447 * 125.56729 * 245.00246 * 4 2 1 6 6 C 1.39838 * 107.86646 * 179.97438 * 5 4 2 7 7 C 1.37870 * 107.08469 * 0.02562 * 6 5 4 8 8 C 1.46678 * 126.23340 * 180.02562 * 7 6 5 9 9 O 1.21692 * 120.00102 * 359.95395 * 8 7 6 10 10 N 1.34784 * 119.99713 * 179.97438 * 8 7 6 11 11 C 1.46506 * 119.99540 * 180.02562 * 10 8 7 12 12 H 1.08997 * 112.84958 * 336.19038 * 11 10 8 13 13 C 1.53778 * 113.61403 * 107.50378 * 11 10 8 14 14 C 1.53779 * 87.08235 * 139.98039 * 13 11 10 15 15 H 1.08995 * 113.61809 * 89.11630 * 14 13 11 16 16 C 1.53002 * 113.68687 * 220.00790 * 14 13 11 17 17 N 1.46497 * 109.47100 * 272.53190 * 16 14 13 18 18 C 1.34425 * 126.82607 * 124.70848 * 17 16 14 19 19 N 1.30833 * 108.08097 * 179.89271 * 18 17 16 20 20 C 1.33249 * 109.82594 * 0.38375 * 19 18 17 21 21 N 1.30709 * 108.94547 * 359.76397 * 20 19 18 22 22 C 1.53785 * 113.60947 * 204.99861 * 11 10 8 23 23 N 1.35537 * 125.55958 * 64.99907 * 4 2 1 24 24 H 0.96704 * 113.99371 * 299.99942 * 1 2 3 25 25 H 1.09004 * 109.47074 * 240.00098 * 2 1 3 26 26 H 1.48502 * 110.00078 * 300.00271 * 3 2 1 27 27 H 1.48496 * 110.00368 * 61.31873 * 3 2 1 28 28 H 1.07997 * 126.06712 * 359.96316 * 5 4 2 29 29 H 1.07993 * 126.46063 * 179.97438 * 6 5 4 30 30 H 0.96998 * 120.00394 * 359.97438 * 10 8 7 31 31 H 1.09010 * 113.61201 * 254.52684 * 13 11 10 32 32 H 1.09000 * 113.61829 * 25.42278 * 13 11 10 33 33 H 1.08997 * 109.47036 * 32.53263 * 16 14 13 34 34 H 1.09006 * 109.46824 * 152.53423 * 16 14 13 35 35 H 1.08000 * 125.95769 * 0.04796 * 18 17 16 36 36 H 1.07997 * 125.52282 * 179.78913 * 20 19 18 37 37 H 1.08995 * 113.61170 * 334.56285 * 22 11 10 38 38 H 1.08990 * 113.61204 * 105.46988 * 22 11 10 39 39 H 0.97000 * 125.67610 * 0.26945 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7103 1.2305 5 6 2.6330 -0.1393 2.2385 6 6 2.9073 -1.1308 3.1858 7 6 2.3533 -2.3030 2.7171 8 6 2.3933 -3.6085 3.3846 9 8 2.9567 -3.7266 4.4568 10 7 1.8064 -4.6773 2.8103 11 6 1.8459 -5.9811 3.4774 12 1 2.6803 -6.0759 4.1723 13 6 0.4943 -6.4098 4.0724 14 6 0.8154 -7.8296 3.5764 15 1 1.3670 -8.4304 4.2994 16 6 -0.3927 -8.5644 2.9919 17 7 -1.1114 -9.2541 4.0661 18 6 -2.4126 -9.1245 4.3775 19 7 -2.6669 -9.9084 5.3937 20 6 -1.5560 -10.5453 5.7623 21 7 -0.5763 -10.1775 4.9791 22 6 1.7096 -7.1709 2.5126 23 7 1.7549 -2.0250 1.5090 24 1 -0.3932 0.4417 0.7651 25 1 1.7923 -0.5138 -0.8900 26 1 1.5614 2.4679 -1.2085 27 1 1.5879 2.4586 1.2242 28 1 2.9284 0.8977 2.2998 29 1 3.4512 -1.0026 4.1098 30 1 1.3573 -4.5832 1.9557 31 1 0.4492 -6.3265 5.1583 32 1 -0.3644 -5.9576 3.5762 33 1 -1.0578 -7.8461 2.5126 34 1 -0.0534 -9.2930 2.2555 35 1 -3.1245 -8.4867 3.8749 36 1 -1.4780 -11.2511 6.5759 37 1 1.1831 -6.9268 1.5900 38 1 2.6455 -7.7019 2.3393 39 1 1.2880 -2.6643 0.9484 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14644236_6580494.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:09:59 Heat of formation + Delta-G solvation = 101.498230 kcal Electronic energy + Delta-G solvation = -23702.101011 eV Core-core repulsion = 20036.153949 eV Total energy + Delta-G solvation = -3665.947062 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 304.132 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -43.01502 -42.59126 -41.09397 -39.40427 -37.94119 -35.60505 -34.18689 -32.21818 -32.14355 -31.45519 -29.26601 -27.08772 -27.00686 -24.82174 -23.24065 -22.99086 -22.28356 -21.54687 -21.41396 -20.80320 -19.79080 -18.52430 -18.25460 -17.51820 -16.80673 -16.75037 -16.56801 -16.31084 -16.02173 -15.83860 -15.29780 -15.24240 -15.12681 -14.80993 -14.46851 -14.36303 -14.04882 -13.93396 -13.79364 -13.66817 -13.35814 -12.84464 -12.54856 -12.41400 -12.10760 -11.95935 -11.74711 -11.27563 -10.95362 -10.92108 -10.74466 -10.61224 -10.27618 -10.13979 -9.34036 -5.02792 0.28788 0.66112 1.05033 1.27515 1.49390 1.54330 1.77080 1.91943 2.04539 2.07677 2.29932 3.10838 3.13378 3.18598 3.25266 3.38298 3.46440 3.50401 3.67843 3.71124 3.88574 3.97425 4.14411 4.16192 4.21097 4.28127 4.32922 4.34936 4.49008 4.59305 4.69883 4.78277 4.93539 4.99980 5.03297 5.26588 5.29471 5.47328 5.52986 5.76231 5.79666 6.11635 6.16371 6.33033 7.03497 7.12911 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.534 6.534 2 C -0.061 4.061 3 Si 0.718 3.282 4 C 0.024 3.976 5 C -0.199 4.199 6 C -0.097 4.097 7 C -0.052 4.052 8 C 0.591 3.409 9 O -0.522 6.522 10 N -0.723 5.723 11 C 0.127 3.873 12 H 0.122 0.878 13 C -0.148 4.148 14 C -0.120 4.120 15 H 0.112 0.888 16 C 0.141 3.859 17 N -0.378 5.378 18 C 0.253 3.747 19 N -0.546 5.546 20 C 0.199 3.801 21 N -0.317 5.317 22 C -0.137 4.137 23 N -0.524 5.524 24 H 0.381 0.619 25 H 0.119 0.881 26 H -0.255 1.255 27 H -0.255 1.255 28 H 0.151 0.849 29 H 0.153 0.847 30 H 0.395 0.605 31 H 0.076 0.924 32 H 0.086 0.914 33 H 0.102 0.898 34 H 0.093 0.907 35 H 0.217 0.783 36 H 0.218 0.782 37 H 0.090 0.910 38 H 0.085 0.915 39 H 0.416 0.584 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.327 1.896 -5.954 6.257 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.171 4.171 3 Si 0.617 3.383 4 C -0.094 4.094 5 C -0.224 4.224 6 C -0.123 4.123 7 C -0.165 4.165 8 C 0.379 3.621 9 O -0.397 6.397 10 N -0.373 5.373 11 C 0.023 3.977 12 H 0.139 0.861 13 C -0.187 4.187 14 C -0.140 4.140 15 H 0.130 0.870 16 C 0.019 3.981 17 N -0.169 5.169 18 C -0.044 4.044 19 N -0.273 5.273 20 C -0.103 4.103 21 N -0.145 5.145 22 C -0.175 4.175 23 N -0.120 5.120 24 H 0.229 0.771 25 H 0.137 0.863 26 H -0.180 1.180 27 H -0.179 1.179 28 H 0.169 0.831 29 H 0.171 0.829 30 H 0.228 0.772 31 H 0.094 0.906 32 H 0.105 0.895 33 H 0.120 0.880 34 H 0.111 0.889 35 H 0.233 0.767 36 H 0.234 0.766 37 H 0.109 0.891 38 H 0.104 0.896 39 H 0.253 0.747 Dipole moment (debyes) X Y Z Total from point charges 0.994 1.913 -5.630 6.029 hybrid contribution -1.674 -0.428 -0.345 1.762 sum -0.679 1.485 -5.975 6.194 Atomic orbital electron populations 1.86596 1.17554 1.80237 1.49700 1.24899 0.84053 1.11887 0.96224 0.94203 0.91425 0.72112 0.80587 1.21094 1.04602 0.84222 0.99447 1.20749 1.05957 1.00354 0.95292 1.21353 1.00693 0.90094 1.00187 1.20459 1.09861 0.95896 0.90320 1.17102 0.78185 0.82218 0.84590 1.90882 1.43748 1.84278 1.20780 1.45863 1.57874 1.09068 1.24543 1.22484 0.99106 0.80475 0.95657 0.86053 1.23589 0.97993 0.94754 1.02329 1.22706 0.96143 0.95697 0.99456 0.87030 1.21855 0.93931 0.95757 0.86530 1.50553 1.08240 1.32434 1.25696 1.26092 0.85983 0.98031 0.94287 1.70572 1.29542 1.12730 1.14495 1.26070 0.85575 0.99365 0.99336 1.78039 1.22990 1.08684 1.04777 1.23378 1.00790 0.95986 0.97394 1.41938 1.43291 1.09310 1.17508 0.77107 0.86283 1.18023 1.17875 0.83126 0.82918 0.77158 0.90555 0.89535 0.87987 0.88852 0.76661 0.76616 0.89144 0.89644 0.74701 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.60 12.88 -35.23 -0.45 0.15 16 2 C -0.06 0.15 3.08 36.01 0.11 0.26 16 3 Si 0.72 -1.95 30.56 -169.99 -5.19 -7.15 16 4 C 0.02 -0.04 6.46 -81.95 -0.53 -0.56 16 5 C -0.20 0.12 9.32 -39.98 -0.37 -0.25 16 6 C -0.10 -0.11 10.65 -39.12 -0.42 -0.52 16 7 C -0.05 -0.03 7.06 -81.98 -0.58 -0.61 16 8 C 0.59 1.02 7.79 -12.85 -0.10 0.92 16 9 O -0.52 -3.03 16.48 5.20 0.09 -2.94 16 10 N -0.72 1.35 5.35 -54.32 -0.29 1.06 16 11 C 0.13 -0.23 4.24 -67.11 -0.28 -0.51 16 12 H 0.12 0.05 7.46 -51.93 -0.39 -0.33 16 13 C -0.15 0.32 7.43 -25.92 -0.19 0.13 16 14 C -0.12 0.35 3.87 -89.80 -0.35 0.00 16 15 H 0.11 -0.08 8.00 -51.93 -0.42 -0.49 16 16 C 0.14 -0.50 6.39 -4.04 -0.03 -0.52 16 17 N -0.38 0.01 3.69 -62.63 -0.23 -0.23 16 18 C 0.25 -0.02 12.63 -90.66 -1.14 -1.17 16 19 N -0.55 -1.59 11.19 -15.83 -0.18 -1.77 16 20 C 0.20 0.45 13.03 -91.81 -1.20 -0.74 16 21 N -0.32 -0.85 12.45 29.29 0.36 -0.48 16 22 C -0.14 0.57 7.39 -25.91 -0.19 0.38 16 23 N -0.52 0.97 5.99 -5.70 -0.03 0.94 16 24 H 0.38 -1.32 8.70 45.56 0.40 -0.92 16 25 H 0.12 -0.42 7.96 -51.93 -0.41 -0.83 16 26 H -0.26 -0.13 7.11 56.52 0.40 0.27 16 27 H -0.25 0.14 7.11 56.52 0.40 0.54 16 28 H 0.15 -0.35 6.19 -52.49 -0.32 -0.68 16 29 H 0.15 0.15 8.06 -52.49 -0.42 -0.27 16 30 H 0.39 -1.89 7.86 -40.82 -0.32 -2.21 16 31 H 0.08 0.01 8.14 -51.92 -0.42 -0.42 16 32 H 0.09 -0.29 7.90 -51.93 -0.41 -0.70 16 33 H 0.10 -0.64 7.79 -51.93 -0.40 -1.05 16 34 H 0.09 -0.37 8.14 -51.93 -0.42 -0.79 16 35 H 0.22 -0.96 8.06 -52.49 -0.42 -1.39 16 36 H 0.22 -0.17 8.06 -52.49 -0.42 -0.59 16 37 H 0.09 -0.55 8.08 -51.93 -0.42 -0.97 16 38 H 0.08 -0.33 8.14 -51.93 -0.42 -0.75 16 39 H 0.42 -1.82 8.19 -40.82 -0.33 -2.15 16 LS Contribution 338.88 15.07 5.11 5.11 Total: 0.00 -11.38 338.88 -10.86 -22.24 By element: Atomic # 1 Polarization: -8.95 SS G_CDS: -4.77 Total: -13.72 kcal Atomic # 6 Polarization: 2.06 SS G_CDS: -5.27 Total: -3.21 kcal Atomic # 7 Polarization: -0.11 SS G_CDS: -0.37 Total: -0.48 kcal Atomic # 8 Polarization: -2.43 SS G_CDS: -0.37 Total: -2.79 kcal Atomic # 14 Polarization: -1.95 SS G_CDS: -5.19 Total: -7.15 kcal Total LS contribution 5.11 Total: 5.11 kcal Total: -11.38 -10.86 -22.24 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14644236_6580494.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 123.742 kcal (2) G-P(sol) polarization free energy of solvation -11.381 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 112.361 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.863 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.244 kcal (6) G-S(sol) free energy of system = (1) + (5) 101.498 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds