Wall clock time and date at job start Sun Mar 7 2021 00:10:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35965 * 116.99720 * 2 1 4 4 C 1.39451 * 120.11882 * 179.97438 * 3 2 1 5 5 O 1.34774 * 133.24403 * 359.93867 * 4 3 2 6 6 C 1.34928 * 110.84283 * 180.02562 * 5 4 3 7 7 C 1.46991 * 125.13770 * 179.97438 * 6 5 4 8 8 O 1.21662 * 119.99599 * 180.02562 * 7 6 5 9 9 N 1.34768 * 120.00147 * 0.02562 * 7 6 5 10 10 C 1.46508 * 119.99926 * 180.02562 * 9 7 6 11 11 H 1.09003 * 112.84817 * 23.80668 * 10 9 7 12 12 C 1.53779 * 113.61286 * 155.00002 * 10 9 7 13 13 C 1.53781 * 87.08110 * 140.06894 * 12 10 9 14 14 H 1.08989 * 113.61864 * 89.20001 * 13 12 10 15 15 C 1.53006 * 113.61135 * 220.01995 * 13 12 10 16 16 N 1.46498 * 109.46687 * 184.99643 * 15 13 12 17 17 C 1.34429 * 126.82178 * 125.00219 * 16 15 13 18 18 N 1.30832 * 108.07816 * 179.97438 * 17 16 15 19 19 C 1.33236 * 109.82856 * 359.97438 * 18 17 16 20 20 N 1.30711 * 108.94882 * 359.75537 * 19 18 17 21 21 C 1.53779 * 113.69036 * 252.53489 * 10 9 7 22 22 C 1.35813 * 109.72157 * 0.23321 * 6 5 4 23 23 C 1.40606 * 119.13614 * 179.97438 * 4 3 2 24 24 C 1.39781 * 120.12147 * 0.02562 * 23 4 3 25 25 C 1.50701 * 120.09747 * 179.97438 * 24 23 4 26 26 O 1.42901 * 109.46986 * 75.00053 * 25 24 23 27 27 Si 1.86298 * 109.47300 * 195.00258 * 25 24 23 28 28 C 1.36633 * 119.81107 * 359.97438 * 24 23 4 29 29 C 1.38257 * 120.12322 * 359.95687 * 3 2 1 30 30 H 1.09001 * 109.47350 * 300.00032 * 1 2 3 31 31 H 1.09005 * 109.47110 * 60.00228 * 1 2 3 32 32 H 1.08997 * 109.47075 * 180.02562 * 1 2 3 33 33 H 0.96999 * 120.00037 * 0.02562 * 9 7 6 34 34 H 1.08999 * 113.61946 * 25.51722 * 12 10 9 35 35 H 1.09002 * 113.69216 * 254.62348 * 12 10 9 36 36 H 1.08992 * 109.47046 * 304.99561 * 15 13 12 37 37 H 1.08997 * 109.47395 * 65.00102 * 15 13 12 38 38 H 1.08007 * 125.96024 * 359.97438 * 17 16 15 39 39 H 1.08003 * 125.52856 * 179.97438 * 19 18 17 40 40 H 1.09005 * 113.61110 * 105.46378 * 21 10 9 41 41 H 1.08996 * 113.61577 * 334.55970 * 21 10 9 42 42 H 1.07994 * 126.96043 * 179.76412 * 22 6 5 43 43 H 1.08998 * 109.46719 * 315.00034 * 25 24 23 44 44 H 0.96701 * 113.99998 * 60.00384 * 26 25 24 45 45 H 1.48496 * 109.99887 * 58.67901 * 27 25 24 46 46 H 1.48499 * 109.99958 * 180.02562 * 27 25 24 47 47 H 1.08001 * 119.75127 * 179.97438 * 28 24 23 48 48 H 1.08007 * 119.66374 * 0.02562 * 29 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2115 0.0000 4 6 3.4387 1.2874 0.0005 5 8 4.4141 0.3574 0.0022 6 6 5.6317 0.9388 0.0025 7 6 6.9131 0.2185 0.0047 8 8 7.9596 0.8390 0.0054 9 7 6.9286 -1.1290 0.0061 10 6 8.2058 -1.8469 0.0088 11 1 9.0244 -1.2527 0.4151 12 6 8.1162 -3.2613 0.6055 13 6 9.0685 -3.7095 -0.5156 14 1 10.1228 -3.6260 -0.2523 15 6 8.7119 -5.0715 -1.1147 16 7 9.7385 -5.4625 -2.0839 17 6 10.4504 -6.6028 -2.0876 18 7 11.2607 -6.5722 -3.1143 19 6 11.0954 -5.4340 -3.7868 20 7 10.1698 -4.7235 -3.1977 21 6 8.5396 -2.5193 -1.3333 22 6 5.4944 2.2899 0.0064 23 6 4.0554 2.5510 0.0000 24 6 3.2765 3.7117 -0.0006 25 6 3.9380 5.0658 -0.0006 26 8 4.4609 5.3404 -1.3018 27 14 2.6861 6.3686 0.4533 28 6 1.9136 3.6151 -0.0011 29 6 1.2957 2.3726 -0.0009 30 1 -0.3634 0.5138 0.8900 31 1 -0.3633 0.5138 -0.8900 32 1 -0.3633 -1.0276 0.0005 33 1 6.0943 -1.6237 0.0052 34 1 7.1218 -3.7024 0.5361 35 1 8.5470 -3.3439 1.6033 36 1 8.6601 -5.8156 -0.3201 37 1 7.7458 -5.0065 -1.6152 38 1 10.3679 -7.4043 -1.3684 39 1 11.6358 -5.1466 -4.6767 40 1 9.3129 -2.0014 -1.9007 41 1 7.6610 -2.7574 -1.9328 42 1 6.2873 3.0232 0.0111 43 1 4.7501 5.0733 0.7264 44 1 3.7924 5.3495 -2.0005 45 1 2.1115 6.0766 1.7911 46 1 3.3260 7.7087 0.4562 47 1 1.3127 4.5126 -0.0011 48 1 0.2173 2.3120 -0.0012 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14644236_6672420.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:10:03 Heat of formation + Delta-G solvation = 60.952207 kcal Electronic energy + Delta-G solvation = -34327.198623 eV Core-core repulsion = 29547.338840 eV Total energy + Delta-G solvation = -4779.859783 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 385.152 amu Computer time = 1.46 seconds Orbital eigenvalues (eV) -43.68688 -42.96703 -41.29803 -40.66318 -39.52036 -39.09893 -37.02417 -35.58288 -34.10322 -33.58195 -32.10266 -31.93704 -31.02455 -29.28474 -28.63615 -26.91441 -26.42427 -25.67095 -23.96794 -23.91562 -22.87031 -22.42804 -21.87303 -21.67914 -20.99224 -19.67144 -18.98916 -18.61624 -18.39498 -17.81620 -17.67717 -17.40720 -17.00226 -16.81901 -16.67633 -16.25359 -16.16924 -15.94337 -15.83467 -15.69460 -15.54439 -15.04405 -14.76898 -14.64600 -14.62138 -14.40137 -14.08666 -13.87104 -13.64778 -13.61219 -13.46944 -13.39276 -13.24284 -12.96202 -12.58798 -12.40863 -12.39741 -12.10576 -12.07763 -11.91782 -11.57167 -11.36757 -10.96163 -10.90413 -10.70774 -10.61020 -10.47522 -10.24052 -9.79145 -9.01383 -5.09884 -0.61149 0.09275 0.68871 0.70575 1.20499 1.27724 1.32952 1.60165 1.92039 1.94702 2.02925 2.03201 2.08556 2.38331 3.08844 3.18333 3.25035 3.38854 3.41774 3.47610 3.50664 3.58329 3.60700 3.80622 3.82263 3.84436 3.92996 3.99185 4.00502 4.05441 4.06078 4.11022 4.15960 4.40214 4.41641 4.42866 4.44211 4.48018 4.54470 4.57273 4.77767 4.80405 4.85890 4.99224 5.00562 5.04307 5.20502 5.26613 5.31888 5.36889 5.51766 5.61173 5.83735 6.12543 6.30868 6.55036 6.91366 7.17344 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.311 6.311 3 C 0.150 3.850 4 C 0.046 3.954 5 O -0.174 6.174 6 C -0.025 4.025 7 C 0.604 3.396 8 O -0.508 6.508 9 N -0.707 5.707 10 C 0.120 3.880 11 H 0.121 0.879 12 C -0.136 4.136 13 C -0.119 4.119 14 H 0.102 0.898 15 C 0.140 3.860 16 N -0.379 5.379 17 C 0.252 3.748 18 N -0.547 5.547 19 C 0.197 3.803 20 N -0.312 5.312 21 C -0.135 4.135 22 C -0.104 4.104 23 C -0.082 4.082 24 C -0.098 4.098 25 C -0.066 4.066 26 O -0.535 6.535 27 Si 0.686 3.314 28 C -0.088 4.088 29 C -0.178 4.178 30 H 0.060 0.940 31 H 0.061 0.939 32 H 0.105 0.895 33 H 0.409 0.591 34 H 0.093 0.907 35 H 0.084 0.916 36 H 0.106 0.894 37 H 0.091 0.909 38 H 0.218 0.782 39 H 0.217 0.783 40 H 0.080 0.920 41 H 0.088 0.912 42 H 0.174 0.826 43 H 0.114 0.886 44 H 0.379 0.621 45 H -0.255 1.255 46 H -0.252 1.252 47 H 0.141 0.859 48 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.505 -2.206 1.815 8.972 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.224 6.224 3 C 0.104 3.896 4 C -0.002 4.002 5 O -0.076 6.076 6 C -0.075 4.075 7 C 0.389 3.611 8 O -0.384 6.384 9 N -0.357 5.357 10 C 0.016 3.984 11 H 0.139 0.861 12 C -0.175 4.175 13 C -0.138 4.138 14 H 0.120 0.880 15 C 0.018 3.982 16 N -0.170 5.170 17 C -0.045 4.045 18 N -0.274 5.274 19 C -0.106 4.106 20 N -0.140 5.140 21 C -0.174 4.174 22 C -0.124 4.124 23 C -0.084 4.084 24 C -0.099 4.099 25 C -0.177 4.177 26 O -0.341 6.341 27 Si 0.587 3.413 28 C -0.105 4.105 29 C -0.197 4.197 30 H 0.079 0.921 31 H 0.080 0.920 32 H 0.123 0.877 33 H 0.244 0.756 34 H 0.112 0.888 35 H 0.103 0.897 36 H 0.124 0.876 37 H 0.110 0.890 38 H 0.234 0.766 39 H 0.233 0.767 40 H 0.099 0.901 41 H 0.107 0.893 42 H 0.191 0.809 43 H 0.131 0.869 44 H 0.226 0.774 45 H -0.179 1.179 46 H -0.177 1.177 47 H 0.158 0.842 48 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges -7.440 -1.134 2.443 7.913 hybrid contribution -0.331 -0.698 0.381 0.861 sum -7.772 -1.832 2.824 8.469 Atomic orbital electron populations 1.23194 0.77288 1.04766 1.01825 1.86171 1.22180 1.25673 1.88395 1.17729 0.86470 0.85896 0.99504 1.18779 0.87463 0.86960 1.07032 1.84042 1.12653 1.34725 1.76157 1.21976 0.83896 0.92604 1.09001 1.16653 0.85400 0.82278 0.76780 1.90928 1.30346 1.67454 1.49718 1.45869 1.10100 1.05624 1.74113 1.22637 0.86609 0.91519 0.97652 0.86105 1.23388 1.00398 0.94859 0.98864 1.22624 1.00759 0.93308 0.97155 0.87990 1.21866 0.89319 0.97560 0.89447 1.50585 1.30836 1.14494 1.21129 1.26132 0.89767 0.91012 0.97594 1.70564 1.25790 1.23138 1.07889 1.26077 0.95396 0.88734 1.00413 1.78097 1.17219 1.19727 0.98912 1.23474 1.01843 0.95568 0.96473 1.22760 0.94790 0.94365 1.00522 1.19411 0.92632 0.92095 1.04215 1.19499 0.92924 0.94469 1.03022 1.25068 1.05482 0.97773 0.89361 1.86546 1.38147 1.93356 1.16007 0.94991 0.83029 0.77832 0.85441 1.20395 0.93085 0.97276 0.99771 1.20981 1.00434 0.90518 1.07731 0.92102 0.92011 0.87653 0.75572 0.88825 0.89706 0.87631 0.89031 0.76560 0.76717 0.90123 0.89308 0.80853 0.86877 0.77408 1.17946 1.17658 0.84172 0.83356 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.08 9.81 101.05 0.99 0.91 16 2 O -0.31 -0.30 10.50 -19.63 -0.21 -0.50 16 3 C 0.15 0.20 6.70 -39.12 -0.26 -0.07 16 4 C 0.05 0.14 7.35 -38.24 -0.28 -0.15 16 5 O -0.17 -0.54 10.28 2.66 0.03 -0.51 16 6 C -0.02 -0.08 7.07 -36.91 -0.26 -0.34 16 7 C 0.60 1.88 7.80 -12.72 -0.10 1.78 16 8 O -0.51 -3.13 16.43 5.22 0.09 -3.04 16 9 N -0.71 -0.01 5.35 -54.22 -0.29 -0.30 16 10 C 0.12 -0.11 4.24 -67.12 -0.28 -0.39 16 11 H 0.12 0.08 7.46 -51.93 -0.39 -0.31 16 12 C -0.14 0.50 7.39 -25.92 -0.19 0.31 16 13 C -0.12 0.31 3.86 -89.80 -0.35 -0.04 16 14 H 0.10 -0.15 8.14 -51.94 -0.42 -0.57 16 15 C 0.14 -0.46 6.39 -4.04 -0.03 -0.48 16 16 N -0.38 -0.04 3.69 -62.63 -0.23 -0.27 16 17 C 0.25 -0.01 12.63 -90.65 -1.14 -1.16 16 18 N -0.55 -1.63 11.19 -15.83 -0.18 -1.81 16 19 C 0.20 0.48 13.03 -91.82 -1.20 -0.72 16 20 N -0.31 -0.87 12.58 29.29 0.37 -0.50 16 21 C -0.13 0.10 7.43 -25.92 -0.19 -0.09 16 22 C -0.10 -0.33 10.68 -37.23 -0.40 -0.72 16 23 C -0.08 -0.21 6.16 -105.21 -0.65 -0.86 16 24 C -0.10 -0.06 5.26 -104.63 -0.55 -0.61 16 25 C -0.07 0.00 2.70 36.01 0.10 0.10 16 26 O -0.54 -0.28 12.88 -35.23 -0.45 -0.74 16 27 Si 0.69 -1.01 29.93 -169.99 -5.09 -6.10 16 28 C -0.09 0.12 8.62 -39.96 -0.34 -0.22 16 29 C -0.18 0.21 9.03 -39.38 -0.36 -0.15 16 30 H 0.06 -0.26 7.66 -51.93 -0.40 -0.66 16 31 H 0.06 -0.27 7.66 -51.93 -0.40 -0.67 16 32 H 0.11 -0.47 8.14 -51.93 -0.42 -0.89 16 33 H 0.41 -0.73 8.44 -40.82 -0.34 -1.08 16 34 H 0.09 -0.47 8.08 -51.93 -0.42 -0.89 16 35 H 0.08 -0.34 8.14 -51.93 -0.42 -0.76 16 36 H 0.11 -0.65 8.09 -51.93 -0.42 -1.07 16 37 H 0.09 -0.32 7.84 -51.93 -0.41 -0.73 16 38 H 0.22 -0.98 8.06 -52.48 -0.42 -1.40 16 39 H 0.22 -0.11 8.06 -52.48 -0.42 -0.53 16 40 H 0.08 0.11 8.14 -51.93 -0.42 -0.31 16 41 H 0.09 -0.07 7.90 -51.93 -0.41 -0.48 16 42 H 0.17 0.46 8.06 -52.49 -0.42 0.04 16 43 H 0.11 0.08 7.96 -51.93 -0.41 -0.33 16 44 H 0.38 -1.34 8.70 45.56 0.40 -0.94 16 45 H -0.25 -0.22 7.11 56.52 0.40 0.18 16 46 H -0.25 -0.49 7.11 56.52 0.40 -0.08 16 47 H 0.14 -0.61 5.07 -52.49 -0.27 -0.88 16 48 H 0.15 -0.60 6.26 -52.48 -0.33 -0.93 16 LS Contribution 411.04 15.07 6.19 6.19 Total: 0.00 -12.53 411.04 -11.22 -23.75 By element: Atomic # 1 Polarization: -7.34 SS G_CDS: -5.95 Total: -13.29 kcal Atomic # 6 Polarization: 2.61 SS G_CDS: -5.49 Total: -2.88 kcal Atomic # 7 Polarization: -2.55 SS G_CDS: -0.33 Total: -2.88 kcal Atomic # 8 Polarization: -4.24 SS G_CDS: -0.55 Total: -4.79 kcal Atomic # 14 Polarization: -1.01 SS G_CDS: -5.09 Total: -6.10 kcal Total LS contribution 6.19 Total: 6.19 kcal Total: -12.53 -11.22 -23.75 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14644236_6672420.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 84.700 kcal (2) G-P(sol) polarization free energy of solvation -12.532 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 72.168 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.216 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.747 kcal (6) G-S(sol) free energy of system = (1) + (5) 60.952 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.47 seconds