Wall clock time and date at job start Sun Mar 7 2021 00:10:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.37942 * 120.07330 * 2 1 4 4 C 1.38377 * 120.14774 * 180.02562 * 3 2 1 5 5 C 1.50695 * 119.85590 * 179.97438 * 4 3 2 6 6 C 1.38341 * 120.29209 * 0.27024 * 4 3 2 7 7 C 1.50696 * 119.92868 * 179.74537 * 6 4 3 8 8 O 1.42893 * 109.47605 * 285.00254 * 7 6 4 9 9 Si 1.86304 * 109.47172 * 164.99982 * 7 6 4 10 10 C 1.37979 * 120.14291 * 359.49186 * 6 4 3 11 11 C 1.39560 * 119.85267 * 0.48820 * 10 6 4 12 12 C 1.47849 * 120.14434 * 179.74577 * 11 10 6 13 13 O 1.21560 * 119.99806 * 186.25087 * 12 11 10 14 14 N 1.34769 * 120.00149 * 6.25137 * 12 11 10 15 15 C 1.46499 * 120.00399 * 180.02562 * 14 12 11 16 16 H 1.09006 * 112.84375 * 336.19430 * 15 14 12 17 17 C 1.53775 * 113.61956 * 107.49616 * 15 14 12 18 18 C 1.53778 * 87.08313 * 139.98139 * 17 15 14 19 19 H 1.09004 * 113.60868 * 89.11881 * 18 17 15 20 20 C 1.52998 * 113.69421 * 220.00874 * 18 17 15 21 21 N 1.46499 * 109.47220 * 272.53683 * 20 18 17 22 22 C 1.34426 * 126.82324 * 124.71157 * 21 20 18 23 23 N 1.30836 * 108.07774 * 179.89436 * 22 21 20 24 24 C 1.33234 * 109.82896 * 0.38157 * 23 22 21 25 25 N 1.30712 * 108.94757 * 359.75915 * 24 23 22 26 26 C 1.53775 * 113.61851 * 205.00092 * 15 14 12 27 27 H 1.08999 * 109.46763 * 96.58774 * 1 2 3 28 28 H 1.08993 * 109.47107 * 216.58724 * 1 2 3 29 29 H 1.08998 * 109.47203 * 336.58771 * 1 2 3 30 30 H 1.07998 * 119.92364 * 0.02562 * 3 2 1 31 31 H 1.08999 * 109.47121 * 89.99557 * 5 4 3 32 32 H 1.08997 * 109.47374 * 209.99728 * 5 4 3 33 33 H 1.09004 * 109.47410 * 330.00052 * 5 4 3 34 34 H 1.09000 * 109.46805 * 45.00540 * 7 6 4 35 35 H 0.96706 * 113.99685 * 300.00585 * 8 7 6 36 36 H 1.48497 * 110.00022 * 179.97438 * 9 7 6 37 37 H 1.48499 * 109.99938 * 301.32464 * 9 7 6 38 38 H 1.08000 * 120.07617 * 180.23030 * 10 6 4 39 39 H 0.97006 * 120.00320 * 359.97438 * 14 12 11 40 40 H 1.09000 * 113.61978 * 254.53314 * 17 15 14 41 41 H 1.09003 * 113.61207 * 25.43624 * 17 15 14 42 42 H 1.09002 * 109.47090 * 32.53849 * 20 18 17 43 43 H 1.08998 * 109.46696 * 152.53744 * 20 18 17 44 44 H 1.08003 * 125.96040 * 0.03702 * 22 21 20 45 45 H 1.08002 * 125.52948 * 179.80105 * 24 23 22 46 46 H 1.09000 * 113.61329 * 334.56267 * 26 15 14 47 47 H 1.08992 * 113.62152 * 105.46334 * 26 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1983 1.1937 0.0000 4 6 3.5820 1.1955 -0.0005 5 6 4.3305 2.5035 -0.0011 6 6 4.2814 0.0019 -0.0067 7 6 5.7883 0.0135 -0.0130 8 8 6.2565 0.3693 -1.3153 9 14 6.4242 -1.6796 0.4343 10 6 3.6022 -1.1991 -0.0018 11 6 2.2066 -1.2080 -0.0009 12 6 1.4723 -2.4912 -0.0013 13 8 0.2620 -2.4989 -0.1151 14 7 2.1446 -3.6524 0.1245 15 6 1.4171 -4.9240 0.1236 16 1 0.3757 -4.8159 0.4269 17 6 1.6033 -5.7393 -1.1669 18 6 1.6788 -6.9886 -0.2734 19 1 0.7085 -7.4460 -0.0796 20 6 2.7344 -8.0017 -0.7208 21 7 2.1488 -8.9143 -1.7059 22 6 2.6087 -9.1666 -2.9437 23 7 1.8092 -10.0376 -3.5040 24 6 0.8275 -10.3572 -2.6619 25 7 0.9921 -9.6949 -1.5471 26 6 2.1568 -6.0576 0.8533 27 1 -0.3633 -0.1179 -1.0209 28 1 -0.3633 -0.8251 0.6125 29 1 -0.3633 0.9430 0.4083 30 1 1.6582 2.1290 0.0004 31 1 4.5113 2.8191 1.0264 32 1 5.2832 2.3767 -0.5152 33 1 3.7384 3.2608 -0.5149 34 1 6.1491 0.7409 0.7141 35 1 5.9728 -0.2358 -2.0143 36 1 7.9091 -1.6816 0.4310 37 1 5.9181 -2.0747 1.7734 38 1 4.1493 -2.1303 -0.0029 39 1 3.1104 -3.6464 0.2150 40 1 0.7329 -5.7236 -1.8228 41 1 2.5336 -5.5207 -1.6911 42 1 3.5766 -7.4747 -1.1692 43 1 3.0799 -8.5713 0.1419 44 1 3.4863 -8.7286 -3.3957 45 1 0.0260 -11.0515 -2.8668 46 1 3.2385 -5.9259 0.8814 47 1 1.7334 -6.2987 1.8282 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14644236_9599494.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:10:18 Heat of formation + Delta-G solvation = 77.607315 kcal Electronic energy + Delta-G solvation = -29412.157904 eV Core-core repulsion = 25371.299386 eV Total energy + Delta-G solvation = -4040.858517 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 343.168 amu Computer time = 1.15 seconds Orbital eigenvalues (eV) -42.98590 -41.80744 -40.73219 -39.43014 -37.69797 -35.66561 -34.44698 -34.37066 -33.06769 -32.11851 -29.68121 -29.03344 -28.41656 -26.96999 -25.74002 -24.71130 -23.70294 -22.96205 -22.81265 -21.83435 -21.36126 -20.54540 -19.06343 -18.47727 -17.65702 -17.61613 -16.94707 -16.62721 -16.47750 -16.39898 -16.28535 -16.02724 -15.78524 -15.55588 -15.14831 -14.94182 -14.83011 -14.61361 -14.53047 -14.16182 -13.94443 -13.88017 -13.72699 -13.44851 -13.27376 -13.12241 -12.88840 -12.71456 -12.68172 -12.56665 -12.44474 -12.18368 -12.04002 -11.96154 -11.68546 -10.91664 -10.73294 -10.67367 -10.56902 -10.52243 -10.17778 -9.95090 -9.63807 -5.26418 -0.27349 0.11615 0.69039 1.11292 1.30843 1.45769 1.74687 1.82161 2.00596 2.07155 2.61796 3.15926 3.23603 3.29732 3.31752 3.40587 3.41214 3.48513 3.58718 3.62516 3.74137 3.77331 3.91852 4.00212 4.08791 4.14779 4.19918 4.32270 4.35663 4.39397 4.45956 4.48526 4.54422 4.60119 4.63099 4.70160 4.75374 4.83005 4.84247 4.90294 4.99914 5.05971 5.07778 5.25439 5.29570 5.41338 5.44570 5.49834 5.53184 5.76327 5.82852 6.36564 6.42825 7.13550 7.15662 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.124 4.124 2 C -0.008 4.008 3 C -0.132 4.132 4 C -0.023 4.023 5 C -0.130 4.130 6 C -0.138 4.138 7 C -0.064 4.064 8 O -0.537 6.537 9 Si 0.673 3.327 10 C -0.071 4.071 11 C -0.147 4.147 12 C 0.562 3.438 13 O -0.525 6.525 14 N -0.719 5.719 15 C 0.127 3.873 16 H 0.120 0.880 17 C -0.147 4.147 18 C -0.121 4.121 19 H 0.110 0.890 20 C 0.141 3.859 21 N -0.378 5.378 22 C 0.253 3.747 23 N -0.547 5.547 24 C 0.199 3.801 25 N -0.318 5.318 26 C -0.138 4.138 27 H 0.079 0.921 28 H 0.096 0.904 29 H 0.060 0.940 30 H 0.133 0.867 31 H 0.074 0.926 32 H 0.085 0.915 33 H 0.071 0.929 34 H 0.115 0.885 35 H 0.379 0.621 36 H -0.250 1.250 37 H -0.253 1.253 38 H 0.126 0.874 39 H 0.399 0.601 40 H 0.075 0.925 41 H 0.089 0.911 42 H 0.104 0.896 43 H 0.093 0.907 44 H 0.218 0.782 45 H 0.217 0.783 46 H 0.092 0.908 47 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.169 0.751 0.565 4.273 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C -0.009 4.009 3 C -0.150 4.150 4 C -0.024 4.024 5 C -0.186 4.186 6 C -0.139 4.139 7 C -0.175 4.175 8 O -0.342 6.342 9 Si 0.574 3.426 10 C -0.089 4.089 11 C -0.150 4.150 12 C 0.350 3.650 13 O -0.402 6.402 14 N -0.370 5.370 15 C 0.022 3.978 16 H 0.137 0.863 17 C -0.186 4.186 18 C -0.141 4.141 19 H 0.128 0.872 20 C 0.019 3.981 21 N -0.169 5.169 22 C -0.044 4.044 23 N -0.274 5.274 24 C -0.104 4.104 25 N -0.145 5.145 26 C -0.177 4.177 27 H 0.097 0.903 28 H 0.114 0.886 29 H 0.079 0.921 30 H 0.151 0.849 31 H 0.093 0.907 32 H 0.104 0.896 33 H 0.090 0.910 34 H 0.132 0.868 35 H 0.227 0.773 36 H -0.175 1.175 37 H -0.177 1.177 38 H 0.143 0.857 39 H 0.234 0.766 40 H 0.093 0.907 41 H 0.107 0.893 42 H 0.122 0.878 43 H 0.111 0.889 44 H 0.234 0.766 45 H 0.233 0.767 46 H 0.110 0.890 47 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges 3.641 0.609 1.746 4.084 hybrid contribution 0.564 0.721 0.215 0.940 sum 4.206 1.329 1.962 4.827 Atomic orbital electron populations 1.21129 0.89632 1.03345 1.03927 1.20111 0.97047 0.91270 0.92463 1.21064 0.93405 0.97915 1.02633 1.20012 0.93428 0.95182 0.93759 1.21016 1.01339 0.93440 1.02842 1.20050 0.96165 0.92816 1.04822 1.24992 0.91631 1.11682 0.89224 1.86510 1.75919 1.55821 1.15958 0.95263 0.81536 0.80491 0.85295 1.20965 0.93050 0.96802 0.98116 1.19618 0.92990 0.93270 1.09107 1.18269 0.87137 0.83609 0.75957 1.90762 1.13629 1.87011 1.48820 1.45902 1.10576 1.05572 1.74982 1.22457 0.98169 0.80753 0.96426 0.86254 1.23587 1.03290 0.94445 0.97265 1.22705 1.00362 0.93659 0.97345 0.87171 1.21871 0.95259 0.89593 0.91404 1.50557 1.20093 1.33179 1.13039 1.26099 0.99607 0.95100 0.83568 1.70564 1.06541 1.17115 1.33180 1.26055 0.98165 0.99030 0.87149 1.78039 1.02078 1.10504 1.23916 1.23388 1.01256 0.94390 0.98638 0.90296 0.88554 0.92118 0.84927 0.90730 0.89601 0.90994 0.86760 0.77346 1.17478 1.17714 0.85653 0.76566 0.90666 0.89297 0.87814 0.88905 0.76597 0.76688 0.88967 0.89790 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.16 8.73 36.01 0.31 0.15 16 2 C -0.01 -0.01 5.91 -104.22 -0.62 -0.63 16 3 C -0.13 -0.03 9.31 -39.64 -0.37 -0.40 16 4 C -0.02 0.00 5.89 -104.54 -0.62 -0.61 16 5 C -0.13 0.14 9.32 36.00 0.34 0.48 16 6 C -0.14 0.13 5.26 -104.68 -0.55 -0.42 16 7 C -0.06 0.11 1.88 36.00 0.07 0.18 16 8 O -0.54 0.76 11.92 -35.23 -0.42 0.34 16 9 Si 0.67 -1.94 29.91 -169.99 -5.08 -7.02 16 10 C -0.07 0.12 8.13 -39.18 -0.32 -0.20 16 11 C -0.15 -0.07 5.87 -104.97 -0.62 -0.69 16 12 C 0.56 0.63 7.70 -12.33 -0.09 0.53 16 13 O -0.52 -2.26 12.95 5.31 0.07 -2.19 16 14 N -0.72 1.54 5.30 -53.96 -0.29 1.25 16 15 C 0.13 -0.28 4.24 -67.13 -0.28 -0.57 16 16 H 0.12 0.00 7.46 -51.93 -0.39 -0.39 16 17 C -0.15 0.42 7.43 -25.92 -0.19 0.22 16 18 C -0.12 0.40 3.87 -89.81 -0.35 0.05 16 19 H 0.11 -0.11 8.00 -51.93 -0.42 -0.52 16 20 C 0.14 -0.56 6.39 -4.04 -0.03 -0.59 16 21 N -0.38 0.17 3.69 -62.63 -0.23 -0.06 16 22 C 0.25 -0.14 12.63 -90.65 -1.14 -1.29 16 23 N -0.55 -1.40 11.19 -15.83 -0.18 -1.58 16 24 C 0.20 0.40 13.03 -91.82 -1.20 -0.80 16 25 N -0.32 -0.76 12.45 29.29 0.36 -0.39 16 26 C -0.14 0.61 7.39 -25.92 -0.19 0.42 16 27 H 0.08 0.13 8.14 -51.93 -0.42 -0.29 16 28 H 0.10 0.28 5.86 -51.93 -0.30 -0.02 16 29 H 0.06 0.00 8.04 -51.93 -0.42 -0.42 16 30 H 0.13 -0.15 8.06 -52.49 -0.42 -0.58 16 31 H 0.07 -0.12 8.14 -51.93 -0.42 -0.55 16 32 H 0.09 -0.04 6.17 -51.93 -0.32 -0.36 16 33 H 0.07 -0.12 8.08 -51.93 -0.42 -0.54 16 34 H 0.12 -0.14 7.37 -51.93 -0.38 -0.52 16 35 H 0.38 -1.92 8.70 45.56 0.40 -1.52 16 36 H -0.25 -0.14 7.11 56.52 0.40 0.26 16 37 H -0.25 0.16 7.11 56.52 0.40 0.57 16 38 H 0.13 -0.59 3.51 -52.49 -0.18 -0.78 16 39 H 0.40 -1.95 6.80 -40.82 -0.28 -2.23 16 40 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 41 H 0.09 -0.39 7.90 -51.93 -0.41 -0.80 16 42 H 0.10 -0.73 7.79 -51.93 -0.40 -1.13 16 43 H 0.09 -0.40 8.14 -51.93 -0.42 -0.82 16 44 H 0.22 -1.10 8.06 -52.48 -0.42 -1.52 16 45 H 0.22 -0.21 8.06 -52.49 -0.42 -0.63 16 46 H 0.09 -0.59 8.08 -51.93 -0.42 -1.01 16 47 H 0.08 -0.33 8.14 -51.93 -0.42 -0.75 16 LS Contribution 383.26 15.07 5.78 5.78 Total: 0.00 -10.70 383.26 -12.36 -23.07 By element: Atomic # 1 Polarization: -8.50 SS G_CDS: -6.53 Total: -15.03 kcal Atomic # 6 Polarization: 1.69 SS G_CDS: -5.85 Total: -4.15 kcal Atomic # 7 Polarization: -0.45 SS G_CDS: -0.33 Total: -0.78 kcal Atomic # 8 Polarization: -1.50 SS G_CDS: -0.35 Total: -1.85 kcal Atomic # 14 Polarization: -1.94 SS G_CDS: -5.08 Total: -7.02 kcal Total LS contribution 5.78 Total: 5.78 kcal Total: -10.70 -12.36 -23.07 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14644236_9599494.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 100.673 kcal (2) G-P(sol) polarization free energy of solvation -10.702 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 89.971 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.364 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.066 kcal (6) G-S(sol) free energy of system = (1) + (5) 77.607 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.15 seconds