Wall clock time and date at job start Sun Mar 7 2021 00:10:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86302 * 109.47346 * 2 1 4 4 C 1.50701 * 109.47159 * 239.99692 * 2 1 3 5 5 C 1.34237 * 126.49653 * 105.35885 * 4 2 1 6 6 N 1.36831 * 109.93415 * 180.13665 * 5 4 2 7 7 C 1.46505 * 125.06217 * 179.81485 * 6 5 4 8 8 C 1.50703 * 109.47064 * 264.69680 * 7 6 5 9 9 O 1.21278 * 119.99985 * 359.97438 * 8 7 6 10 10 N 1.34777 * 120.00161 * 180.02562 * 8 7 6 11 11 C 1.46496 * 120.00271 * 180.02562 * 10 8 7 12 12 H 1.09003 * 112.84993 * 336.19005 * 11 10 8 13 13 C 1.53781 * 113.61614 * 107.49783 * 11 10 8 14 14 C 1.53782 * 87.07914 * 139.98041 * 13 11 10 15 15 H 1.09004 * 113.61191 * 89.11831 * 14 13 11 16 16 C 1.53003 * 113.69178 * 220.00440 * 14 13 11 17 17 N 1.46495 * 109.47439 * 272.54059 * 16 14 13 18 18 C 1.34429 * 126.82485 * 124.70897 * 17 16 14 19 19 N 1.30828 * 108.07727 * 179.89444 * 18 17 16 20 20 C 1.33237 * 109.82929 * 0.37857 * 19 18 17 21 21 N 1.30716 * 108.94880 * 359.76455 * 20 19 18 22 22 C 1.53780 * 87.08354 * 334.56761 * 14 13 11 23 23 C 1.37692 * 109.87806 * 359.55007 * 6 5 4 24 24 C 1.39085 * 133.51788 * 180.29064 * 23 6 5 25 25 C 1.37788 * 119.78065 * 179.97438 * 24 23 6 26 26 C 1.38790 * 120.66457 * 0.02562 * 25 24 23 27 27 C 1.36659 * 120.53097 * 359.96459 * 26 25 24 28 28 C 1.39595 * 119.76215 * 0.03695 * 27 26 25 29 29 H 0.96694 * 114.00215 * 60.00007 * 1 2 3 30 30 H 1.09007 * 109.47078 * 119.99788 * 2 1 3 31 31 H 1.48494 * 109.99788 * 298.68014 * 3 2 1 32 32 H 1.48500 * 109.99849 * 60.00087 * 3 2 1 33 33 H 1.07995 * 125.03237 * 359.96752 * 5 4 2 34 34 H 1.09002 * 109.47068 * 24.69648 * 7 6 5 35 35 H 1.09001 * 109.47372 * 144.69736 * 7 6 5 36 36 H 0.97005 * 119.99463 * 359.97438 * 10 8 7 37 37 H 1.09000 * 113.61499 * 254.52652 * 13 11 10 38 38 H 1.09000 * 113.61078 * 25.43522 * 13 11 10 39 39 H 1.09006 * 109.46809 * 32.54145 * 16 14 13 40 40 H 1.08998 * 109.46686 * 152.53560 * 16 14 13 41 41 H 1.07999 * 125.96003 * 0.03463 * 18 17 16 42 42 H 1.08004 * 125.52721 * 179.80267 * 20 19 18 43 43 H 1.09002 * 113.61383 * 270.88322 * 22 14 13 44 44 H 1.09006 * 113.61274 * 139.98085 * 22 14 13 45 45 H 1.08002 * 120.10989 * 359.93834 * 24 23 6 46 46 H 1.08001 * 119.66775 * 179.97438 * 25 24 23 47 47 H 1.07994 * 119.73514 * 179.97438 * 26 25 24 48 48 H 1.07997 * 120.12238 * 180.02562 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 2.4669 -0.1381 -2.3201 6 7 2.8039 -1.0991 -3.2340 7 6 3.4095 -0.8406 -4.5427 8 6 2.3305 -0.7840 -5.5932 9 8 1.1699 -0.9443 -5.2796 10 7 2.6552 -0.5563 -6.8813 11 6 1.6062 -0.5007 -7.9024 12 1 0.7056 -1.0429 -7.6140 13 6 1.3316 0.9186 -8.4268 14 6 1.1977 0.2913 -9.8245 15 1 0.1846 -0.0333 -10.0622 16 6 1.8294 1.1296 -10.9377 17 7 0.8506 2.1000 -11.4337 18 6 1.0035 3.4336 -11.5059 19 7 -0.0936 3.9416 -12.0059 20 6 -0.9688 2.9687 -12.2566 21 7 -0.4364 1.8225 -11.9227 22 6 2.1045 -0.8421 -9.3166 23 6 2.4945 -2.3458 -2.7380 24 6 2.6301 -3.6364 -3.2386 25 6 2.2161 -4.7109 -2.4819 26 6 1.6635 -4.5194 -1.2232 27 6 1.5212 -3.2601 -0.7118 28 6 1.9339 -2.1571 -1.4613 29 1 -0.3933 0.4417 -0.7650 30 1 1.7923 -0.5138 0.8901 31 1 1.5879 2.4585 -1.2242 32 1 1.5615 2.4679 1.2085 33 1 2.6082 0.9238 -2.4566 34 1 3.9406 0.1109 -4.5157 35 1 4.1095 -1.6407 -4.7836 36 1 3.5835 -0.4284 -7.1320 37 1 0.4040 1.3509 -8.0516 38 1 2.1832 1.5921 -8.3303 39 1 2.6986 1.6580 -10.5458 40 1 2.1388 0.4761 -11.7534 41 1 1.8800 3.9886 -11.2058 42 1 -1.9575 3.1050 -12.6693 43 1 3.1674 -0.6499 -9.4633 44 1 1.8008 -1.8312 -9.6596 45 1 3.0579 -3.7957 -4.2173 46 1 2.3218 -5.7122 -2.8725 47 1 1.3437 -5.3723 -0.6432 48 1 1.0908 -3.1187 0.2685 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14644236_9818708.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:10:22 Heat of formation + Delta-G solvation = 129.480703 kcal Electronic energy + Delta-G solvation = -32040.863465 eV Core-core repulsion = 27680.376155 eV Total energy + Delta-G solvation = -4360.487310 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.164 amu Computer time = 1.33 seconds Orbital eigenvalues (eV) -43.04579 -42.52273 -41.31052 -39.71537 -38.04324 -37.59602 -35.63515 -34.37024 -33.86754 -32.17697 -31.42038 -30.15370 -29.59666 -28.65073 -27.07723 -25.93223 -24.58896 -23.62308 -23.02102 -22.82462 -22.30212 -21.81718 -20.88564 -20.55778 -18.76170 -18.54951 -18.43945 -17.80425 -17.46472 -17.11426 -16.72055 -16.52839 -16.34246 -16.31729 -16.02709 -15.89087 -15.51390 -15.30269 -15.18854 -14.82279 -14.68849 -14.58881 -14.41217 -14.03289 -13.95366 -13.84454 -13.72738 -13.44070 -13.25993 -12.86832 -12.64076 -12.57674 -12.47961 -12.28742 -12.14710 -11.90564 -11.79699 -11.64911 -11.17038 -10.96643 -10.77670 -10.64949 -10.44847 -10.36610 -10.31302 -9.05174 -8.56085 -4.93175 0.25092 0.63048 0.76935 1.23557 1.30249 1.34303 1.40137 1.60945 1.68442 2.00494 2.01660 2.06051 3.04818 3.09113 3.14539 3.20372 3.35065 3.36155 3.41340 3.51720 3.57744 3.64708 3.70693 3.75969 3.82899 3.84172 3.94153 4.05163 4.11726 4.24505 4.28377 4.29228 4.34441 4.44151 4.53537 4.56980 4.65309 4.69907 4.72489 4.78220 4.88014 4.94311 4.97225 5.22865 5.23600 5.25106 5.44267 5.62234 5.76724 5.78273 5.83791 5.87638 6.08265 6.26590 6.33498 6.59634 6.91955 7.10005 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.037 4.037 3 Si 0.682 3.318 4 C -0.192 4.192 5 C 0.066 3.934 6 N -0.466 5.466 7 C 0.091 3.909 8 C 0.491 3.509 9 O -0.512 6.512 10 N -0.719 5.719 11 C 0.126 3.874 12 H 0.117 0.883 13 C -0.147 4.147 14 C -0.121 4.121 15 H 0.110 0.890 16 C 0.142 3.858 17 N -0.379 5.379 18 C 0.253 3.747 19 N -0.546 5.546 20 C 0.200 3.800 21 N -0.317 5.317 22 C -0.136 4.136 23 C 0.109 3.891 24 C -0.128 4.128 25 C -0.096 4.096 26 C -0.146 4.146 27 C -0.065 4.065 28 C -0.086 4.086 29 H 0.374 0.626 30 H 0.114 0.886 31 H -0.261 1.261 32 H -0.256 1.256 33 H 0.168 0.832 34 H 0.123 0.877 35 H 0.119 0.881 36 H 0.403 0.597 37 H 0.073 0.927 38 H 0.088 0.912 39 H 0.103 0.897 40 H 0.093 0.907 41 H 0.217 0.783 42 H 0.217 0.783 43 H 0.092 0.908 44 H 0.084 0.916 45 H 0.114 0.886 46 H 0.125 0.875 47 H 0.123 0.877 48 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 9.691 0.248 -2.878 10.112 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.148 4.148 3 Si 0.584 3.416 4 C -0.200 4.200 5 C -0.059 4.059 6 N -0.149 5.149 7 C -0.035 4.035 8 C 0.275 3.725 9 O -0.386 6.386 10 N -0.372 5.372 11 C 0.021 3.979 12 H 0.135 0.865 13 C -0.186 4.186 14 C -0.141 4.141 15 H 0.128 0.872 16 C 0.020 3.980 17 N -0.170 5.170 18 C -0.044 4.044 19 N -0.273 5.273 20 C -0.103 4.103 21 N -0.145 5.145 22 C -0.174 4.174 23 C 0.004 3.996 24 C -0.149 4.149 25 C -0.115 4.115 26 C -0.165 4.165 27 C -0.083 4.083 28 C -0.090 4.090 29 H 0.222 0.778 30 H 0.132 0.868 31 H -0.186 1.186 32 H -0.181 1.181 33 H 0.185 0.815 34 H 0.141 0.859 35 H 0.137 0.863 36 H 0.237 0.763 37 H 0.092 0.908 38 H 0.106 0.894 39 H 0.121 0.879 40 H 0.112 0.888 41 H 0.234 0.766 42 H 0.234 0.766 43 H 0.111 0.889 44 H 0.102 0.898 45 H 0.132 0.868 46 H 0.143 0.857 47 H 0.141 0.859 48 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges 8.487 0.339 -2.474 8.847 hybrid contribution -0.404 -0.013 -0.878 0.967 sum 8.083 0.326 -3.352 8.756 Atomic orbital electron populations 1.86593 1.18066 1.79928 1.49040 1.24295 0.83411 1.09757 0.97299 0.95376 0.91403 0.74513 0.80355 1.20591 1.09276 0.92372 0.97770 1.21574 1.01203 0.93932 0.89206 1.43186 1.53949 1.04664 1.13143 1.21596 0.94510 1.06021 0.81357 1.21101 0.90850 0.76833 0.83705 1.90821 1.19969 1.47045 1.80739 1.45931 1.10699 1.73673 1.06866 1.22462 0.92380 0.97148 0.85868 0.86466 1.23579 1.02931 0.97150 0.94940 1.22705 1.01477 0.96527 0.93346 0.87158 1.21852 0.88430 0.90505 0.97262 1.50555 1.12406 1.07000 1.47002 1.26095 0.99121 0.82560 0.96623 1.70565 1.01775 1.33609 1.21372 1.26071 1.00620 0.85161 0.98479 1.78045 0.92159 1.23992 1.20315 1.23372 1.00147 0.99434 0.94480 1.18169 1.01425 0.85817 0.94155 1.19947 1.05381 0.89268 1.00285 1.20829 0.98297 0.97951 0.94455 1.20675 1.02377 0.96969 0.96436 1.20315 0.97795 0.90914 0.99286 1.18940 1.03165 0.92772 0.94139 0.77833 0.86809 1.18632 1.18095 0.81464 0.85895 0.86331 0.76267 0.90786 0.89387 0.87909 0.88843 0.76626 0.76625 0.88916 0.89762 0.86777 0.85724 0.85905 0.85891 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.76 12.88 -35.23 -0.45 -2.21 16 2 C -0.04 -0.05 3.06 36.01 0.11 0.06 16 3 Si 0.68 -0.36 30.81 -169.99 -5.24 -5.60 16 4 C -0.19 -0.43 5.58 -102.71 -0.57 -1.00 16 5 C 0.07 0.05 9.89 -16.73 -0.17 -0.12 16 6 N -0.47 -0.39 2.27 -115.70 -0.26 -0.65 16 7 C 0.09 -0.29 6.48 -5.19 -0.03 -0.32 16 8 C 0.49 -0.32 7.90 -10.98 -0.09 -0.41 16 9 O -0.51 -2.51 16.02 5.56 0.09 -2.42 16 10 N -0.72 2.79 5.35 -53.02 -0.28 2.51 16 11 C 0.13 -0.34 4.24 -67.12 -0.28 -0.63 16 12 H 0.12 0.03 7.46 -51.93 -0.39 -0.36 16 13 C -0.15 0.44 7.43 -25.92 -0.19 0.25 16 14 C -0.12 0.41 3.87 -89.81 -0.35 0.06 16 15 H 0.11 -0.10 8.00 -51.93 -0.42 -0.51 16 16 C 0.14 -0.58 6.39 -4.04 -0.03 -0.60 16 17 N -0.38 0.16 3.69 -62.63 -0.23 -0.07 16 18 C 0.25 -0.13 12.63 -90.66 -1.14 -1.28 16 19 N -0.55 -1.42 11.19 -15.83 -0.18 -1.60 16 20 C 0.20 0.41 13.03 -91.81 -1.20 -0.79 16 21 N -0.32 -0.77 12.45 29.29 0.36 -0.41 16 22 C -0.14 0.67 7.39 -25.92 -0.19 0.48 16 23 C 0.11 0.34 6.80 -83.99 -0.57 -0.23 16 24 C -0.13 -0.29 10.00 -39.43 -0.39 -0.68 16 25 C -0.10 -0.19 10.01 -39.54 -0.40 -0.58 16 26 C -0.15 -0.35 9.97 -39.95 -0.40 -0.75 16 27 C -0.06 -0.22 10.05 -39.65 -0.40 -0.62 16 28 C -0.09 -0.34 6.35 -105.14 -0.67 -1.01 16 29 H 0.37 0.36 8.70 45.56 0.40 0.76 16 30 H 0.11 0.09 7.96 -51.93 -0.41 -0.33 16 31 H -0.26 -0.28 7.00 56.52 0.40 0.12 16 32 H -0.26 -0.73 7.11 56.52 0.40 -0.32 16 33 H 0.17 -0.33 6.27 -52.49 -0.33 -0.66 16 34 H 0.12 -0.81 8.12 -51.93 -0.42 -1.23 16 35 H 0.12 -0.64 8.14 -51.93 -0.42 -1.07 16 36 H 0.40 -2.97 8.73 -40.82 -0.36 -3.32 16 37 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 38 H 0.09 -0.40 7.90 -51.93 -0.41 -0.81 16 39 H 0.10 -0.73 7.79 -51.93 -0.40 -1.13 16 40 H 0.09 -0.41 8.14 -51.93 -0.42 -0.83 16 41 H 0.22 -1.08 8.06 -52.49 -0.42 -1.51 16 42 H 0.22 -0.20 8.06 -52.48 -0.42 -0.62 16 43 H 0.09 -0.65 8.08 -51.93 -0.42 -1.07 16 44 H 0.08 -0.36 8.14 -51.93 -0.42 -0.78 16 45 H 0.11 0.02 8.06 -52.49 -0.42 -0.40 16 46 H 0.12 -0.03 8.06 -52.49 -0.42 -0.45 16 47 H 0.12 0.07 8.06 -52.49 -0.42 -0.36 16 48 H 0.12 0.31 8.06 -52.49 -0.42 -0.11 16 LS Contribution 409.77 15.07 6.18 6.18 Total: 0.00 -14.32 409.77 -13.57 -27.89 By element: Atomic # 1 Polarization: -8.85 SS G_CDS: -6.59 Total: -15.44 kcal Atomic # 6 Polarization: -1.22 SS G_CDS: -6.96 Total: -8.18 kcal Atomic # 7 Polarization: 0.38 SS G_CDS: -0.59 Total: -0.21 kcal Atomic # 8 Polarization: -4.27 SS G_CDS: -0.36 Total: -4.63 kcal Atomic # 14 Polarization: -0.36 SS G_CDS: -5.24 Total: -5.60 kcal Total LS contribution 6.18 Total: 6.18 kcal Total: -14.32 -13.57 -27.89 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14644236_9818708.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 157.373 kcal (2) G-P(sol) polarization free energy of solvation -14.324 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 143.049 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.568 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.892 kcal (6) G-S(sol) free energy of system = (1) + (5) 129.481 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.33 seconds