Wall clock time and date at job start Sun Mar 7 2021 00:10:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86302 * 109.47346 * 2 1 4 4 C 1.50701 * 109.47159 * 239.99692 * 2 1 3 5 5 C 1.34237 * 126.49653 * 105.35885 * 4 2 1 6 6 N 1.36831 * 109.93415 * 180.13665 * 5 4 2 7 7 C 1.46505 * 125.06217 * 179.81485 * 6 5 4 8 8 C 1.50703 * 109.47064 * 264.69680 * 7 6 5 9 9 O 1.21278 * 119.99985 * 359.97438 * 8 7 6 10 10 N 1.34777 * 120.00161 * 180.02562 * 8 7 6 11 11 C 1.46496 * 120.00271 * 180.02562 * 10 8 7 12 12 H 1.09003 * 112.84993 * 336.19005 * 11 10 8 13 13 C 1.53781 * 113.61614 * 107.49783 * 11 10 8 14 14 C 1.53782 * 87.07914 * 139.98041 * 13 11 10 15 15 H 1.09004 * 113.61191 * 89.11831 * 14 13 11 16 16 C 1.53003 * 113.69178 * 220.00440 * 14 13 11 17 17 N 1.46495 * 109.47439 * 272.54059 * 16 14 13 18 18 C 1.34429 * 126.82485 * 124.70897 * 17 16 14 19 19 N 1.30828 * 108.07727 * 179.89444 * 18 17 16 20 20 C 1.33237 * 109.82929 * 0.37857 * 19 18 17 21 21 N 1.30716 * 108.94880 * 359.76455 * 20 19 18 22 22 C 1.53780 * 87.08354 * 334.56761 * 14 13 11 23 23 C 1.37692 * 109.87806 * 359.55007 * 6 5 4 24 24 C 1.39085 * 133.51788 * 180.29064 * 23 6 5 25 25 C 1.37788 * 119.78065 * 179.97438 * 24 23 6 26 26 C 1.38790 * 120.66457 * 0.02562 * 25 24 23 27 27 C 1.36659 * 120.53097 * 359.96459 * 26 25 24 28 28 C 1.39595 * 119.76215 * 0.03695 * 27 26 25 29 29 H 0.96694 * 114.00215 * 60.00007 * 1 2 3 30 30 H 1.09007 * 109.47078 * 119.99788 * 2 1 3 31 31 H 1.48494 * 109.99788 * 298.68014 * 3 2 1 32 32 H 1.48500 * 109.99849 * 60.00087 * 3 2 1 33 33 H 1.07995 * 125.03237 * 359.96752 * 5 4 2 34 34 H 1.09002 * 109.47068 * 24.69648 * 7 6 5 35 35 H 1.09001 * 109.47372 * 144.69736 * 7 6 5 36 36 H 0.97005 * 119.99463 * 359.97438 * 10 8 7 37 37 H 1.09000 * 113.61499 * 254.52652 * 13 11 10 38 38 H 1.09000 * 113.61078 * 25.43522 * 13 11 10 39 39 H 1.09006 * 109.46809 * 32.54145 * 16 14 13 40 40 H 1.08998 * 109.46686 * 152.53560 * 16 14 13 41 41 H 1.07999 * 125.96003 * 0.03463 * 18 17 16 42 42 H 1.08004 * 125.52721 * 179.80267 * 20 19 18 43 43 H 1.09002 * 113.61383 * 270.88322 * 22 14 13 44 44 H 1.09006 * 113.61274 * 139.98085 * 22 14 13 45 45 H 1.08002 * 120.10989 * 359.93834 * 24 23 6 46 46 H 1.08001 * 119.66775 * 179.97438 * 25 24 23 47 47 H 1.07994 * 119.73514 * 179.97438 * 26 25 24 48 48 H 1.07997 * 120.12238 * 180.02562 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 2.4669 -0.1381 -2.3201 6 7 2.8039 -1.0991 -3.2340 7 6 3.4095 -0.8406 -4.5427 8 6 2.3305 -0.7840 -5.5932 9 8 1.1699 -0.9443 -5.2796 10 7 2.6552 -0.5563 -6.8813 11 6 1.6062 -0.5007 -7.9024 12 1 0.7056 -1.0429 -7.6140 13 6 1.3316 0.9186 -8.4268 14 6 1.1977 0.2913 -9.8245 15 1 0.1846 -0.0333 -10.0622 16 6 1.8294 1.1296 -10.9377 17 7 0.8506 2.1000 -11.4337 18 6 1.0035 3.4336 -11.5059 19 7 -0.0936 3.9416 -12.0059 20 6 -0.9688 2.9687 -12.2566 21 7 -0.4364 1.8225 -11.9227 22 6 2.1045 -0.8421 -9.3166 23 6 2.4945 -2.3458 -2.7380 24 6 2.6301 -3.6364 -3.2386 25 6 2.2161 -4.7109 -2.4819 26 6 1.6635 -4.5194 -1.2232 27 6 1.5212 -3.2601 -0.7118 28 6 1.9339 -2.1571 -1.4613 29 1 -0.3933 0.4417 -0.7650 30 1 1.7923 -0.5138 0.8901 31 1 1.5879 2.4585 -1.2242 32 1 1.5615 2.4679 1.2085 33 1 2.6082 0.9238 -2.4566 34 1 3.9406 0.1109 -4.5157 35 1 4.1095 -1.6407 -4.7836 36 1 3.5835 -0.4284 -7.1320 37 1 0.4040 1.3509 -8.0516 38 1 2.1832 1.5921 -8.3303 39 1 2.6986 1.6580 -10.5458 40 1 2.1388 0.4761 -11.7534 41 1 1.8800 3.9886 -11.2058 42 1 -1.9575 3.1050 -12.6693 43 1 3.1674 -0.6499 -9.4633 44 1 1.8008 -1.8312 -9.6596 45 1 3.0579 -3.7957 -4.2173 46 1 2.3218 -5.7122 -2.8725 47 1 1.3437 -5.3723 -0.6432 48 1 1.0908 -3.1187 0.2685 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14644236_9818708.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:10:21 Heat of formation + Delta-G solvation = 127.643711 kcal Electronic energy + Delta-G solvation = -32040.943123 eV Core-core repulsion = 27680.376155 eV Total energy + Delta-G solvation = -4360.566968 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.164 amu Computer time = 1.36 seconds Orbital eigenvalues (eV) -43.00521 -42.54637 -41.16905 -39.60638 -38.16720 -37.70552 -35.51124 -34.31962 -33.82500 -32.18694 -31.46583 -30.25489 -29.50574 -28.53523 -26.78689 -25.94979 -24.49360 -23.70531 -22.96217 -22.83681 -22.27015 -21.70191 -20.79300 -20.48876 -18.72711 -18.43537 -18.36341 -17.79960 -17.41317 -17.07652 -16.62895 -16.41274 -16.36527 -16.29126 -16.06376 -15.86262 -15.49028 -15.33955 -15.09026 -14.85230 -14.73596 -14.55064 -14.39911 -14.11222 -13.71375 -13.64999 -13.50100 -13.34583 -13.11922 -12.75270 -12.72326 -12.57809 -12.43453 -12.38916 -12.01853 -11.91299 -11.75336 -11.57194 -11.16702 -10.99173 -10.81784 -10.58744 -10.51576 -10.47150 -10.13795 -9.16922 -8.64212 -4.90940 0.13147 0.62890 0.68579 1.33549 1.39863 1.43487 1.45982 1.60421 1.70047 1.99076 1.99282 2.21362 2.93835 3.33896 3.43525 3.44707 3.48840 3.52213 3.60982 3.66222 3.71814 3.76125 3.85207 3.86481 4.04313 4.12390 4.15407 4.16502 4.21340 4.29397 4.36889 4.48784 4.49881 4.57826 4.65966 4.70598 4.71007 4.75124 4.78190 4.88855 4.89680 4.99262 5.12850 5.16263 5.29418 5.43021 5.49762 5.50162 5.65476 5.72631 5.74188 5.94880 6.18281 6.22803 6.48019 6.52145 7.11481 7.15065 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.556 6.556 2 C -0.058 4.058 3 Si 0.789 3.211 4 C -0.217 4.217 5 C 0.075 3.925 6 N -0.466 5.466 7 C 0.088 3.912 8 C 0.489 3.511 9 O -0.579 6.579 10 N -0.697 5.697 11 C 0.118 3.882 12 H 0.076 0.924 13 C -0.139 4.139 14 C -0.119 4.119 15 H 0.074 0.926 16 C 0.136 3.864 17 N -0.378 5.378 18 C 0.258 3.742 19 N -0.586 5.586 20 C 0.185 3.815 21 N -0.353 5.353 22 C -0.113 4.113 23 C 0.091 3.909 24 C -0.133 4.133 25 C -0.108 4.108 26 C -0.154 4.154 27 C -0.089 4.089 28 C -0.117 4.117 29 H 0.381 0.619 30 H 0.110 0.890 31 H -0.274 1.274 32 H -0.305 1.305 33 H 0.198 0.802 34 H 0.168 0.832 35 H 0.147 0.853 36 H 0.425 0.575 37 H 0.038 0.962 38 H 0.117 0.883 39 H 0.147 0.853 40 H 0.101 0.899 41 H 0.261 0.739 42 H 0.229 0.771 43 H 0.131 0.869 44 H 0.077 0.923 45 H 0.134 0.866 46 H 0.145 0.855 47 H 0.135 0.865 48 H 0.118 0.882 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 13.492 1.223 -4.311 14.216 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.364 6.364 2 C -0.166 4.166 3 Si 0.693 3.307 4 C -0.224 4.224 5 C -0.051 4.051 6 N -0.148 5.148 7 C -0.037 4.037 8 C 0.275 3.725 9 O -0.458 6.458 10 N -0.350 5.350 11 C 0.013 3.987 12 H 0.094 0.906 13 C -0.178 4.178 14 C -0.139 4.139 15 H 0.093 0.907 16 C 0.016 3.984 17 N -0.169 5.169 18 C -0.038 4.038 19 N -0.314 5.314 20 C -0.117 4.117 21 N -0.181 5.181 22 C -0.152 4.152 23 C -0.014 4.014 24 C -0.154 4.154 25 C -0.127 4.127 26 C -0.173 4.173 27 C -0.107 4.107 28 C -0.121 4.121 29 H 0.229 0.771 30 H 0.127 0.873 31 H -0.200 1.200 32 H -0.233 1.233 33 H 0.214 0.786 34 H 0.185 0.815 35 H 0.165 0.835 36 H 0.264 0.736 37 H 0.057 0.943 38 H 0.135 0.865 39 H 0.165 0.835 40 H 0.119 0.881 41 H 0.277 0.723 42 H 0.246 0.754 43 H 0.149 0.851 44 H 0.096 0.904 45 H 0.152 0.848 46 H 0.163 0.837 47 H 0.153 0.847 48 H 0.136 0.864 Dipole moment (debyes) X Y Z Total from point charges 12.357 1.271 -3.961 13.039 hybrid contribution -1.605 -0.353 -0.428 1.698 sum 10.753 0.918 -4.388 11.650 Atomic orbital electron populations 1.86552 1.19630 1.80583 1.49627 1.24748 0.82476 1.12190 0.97156 0.94202 0.89472 0.70328 0.76723 1.20711 1.10899 0.91909 0.98905 1.22013 0.99500 0.95101 0.88462 1.43430 1.53309 1.03739 1.14341 1.22041 0.93656 1.09450 0.78525 1.21605 0.90428 0.75651 0.84858 1.90812 1.22764 1.50344 1.81839 1.45740 1.11593 1.72015 1.05638 1.22310 0.91812 0.97289 0.87319 0.90551 1.23567 1.02342 0.97071 0.94831 1.22533 1.00328 0.97463 0.93551 0.90747 1.22237 0.88571 0.90533 0.97066 1.50760 1.11838 1.07846 1.46422 1.26909 0.99390 0.82617 0.94922 1.70535 1.03121 1.34659 1.23122 1.26422 1.01420 0.85217 0.98676 1.77959 0.94052 1.24724 1.21399 1.23312 1.01752 0.98432 0.91692 1.18398 1.01759 0.87050 0.94191 1.20251 1.05018 0.89074 1.01029 1.21135 0.98191 0.99079 0.94293 1.20916 1.02324 0.97021 0.97053 1.20452 0.98993 0.91746 0.99556 1.19352 1.03814 0.93806 0.95108 0.77097 0.87252 1.20010 1.23261 0.78574 0.81507 0.83490 0.73594 0.94322 0.86452 0.83549 0.88125 0.72336 0.75447 0.85115 0.90408 0.84790 0.83695 0.84662 0.86420 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -4.97 12.88 -148.98 -1.92 -6.89 16 2 C -0.06 -0.24 3.06 71.24 0.22 -0.02 16 3 Si 0.79 -1.00 30.81 68.60 2.11 1.12 16 4 C -0.22 -1.20 5.58 -18.63 -0.10 -1.31 16 5 C 0.07 0.06 9.89 83.00 0.82 0.88 16 6 N -0.47 -0.35 2.27 -519.98 -1.18 -1.53 16 7 C 0.09 -0.79 6.48 85.63 0.56 -0.24 16 8 C 0.49 -1.17 7.90 87.66 0.69 -0.47 16 9 O -0.58 -6.41 16.02 -3.02 -0.05 -6.46 16 10 N -0.70 6.85 5.35 -440.04 -2.36 4.49 16 11 C 0.12 -0.66 4.24 45.52 0.19 -0.47 16 12 H 0.08 0.25 7.46 -2.39 -0.02 0.23 16 13 C -0.14 0.92 7.43 31.12 0.23 1.15 16 14 C -0.12 0.86 3.87 -10.27 -0.04 0.82 16 15 H 0.07 0.03 8.00 -2.39 -0.02 0.01 16 16 C 0.14 -1.42 6.39 86.38 0.55 -0.86 16 17 N -0.38 0.60 3.69 -352.07 -1.30 -0.70 16 18 C 0.26 -0.61 12.63 180.36 2.28 1.67 16 19 N -0.59 -3.21 11.19 -204.00 -2.28 -5.49 16 20 C 0.19 1.01 13.03 180.77 2.36 3.37 16 21 N -0.35 -2.12 12.45 -61.24 -0.76 -2.89 16 22 C -0.11 1.32 7.39 31.12 0.23 1.55 16 23 C 0.09 0.61 6.80 39.03 0.27 0.88 16 24 C -0.13 -0.62 10.00 22.37 0.22 -0.40 16 25 C -0.11 -0.50 10.01 22.30 0.22 -0.28 16 26 C -0.15 -1.02 9.97 22.03 0.22 -0.80 16 27 C -0.09 -0.85 10.05 22.23 0.22 -0.63 16 28 C -0.12 -1.13 6.35 -20.20 -0.13 -1.26 16 29 H 0.38 1.58 8.70 -74.06 -0.64 0.93 16 30 H 0.11 0.42 7.96 -2.38 -0.02 0.40 16 31 H -0.27 -0.21 7.00 99.48 0.70 0.49 16 32 H -0.30 -2.05 7.11 99.48 0.71 -1.34 16 33 H 0.20 -1.21 6.27 -2.91 -0.02 -1.22 16 34 H 0.17 -2.99 8.12 -2.39 -0.02 -3.00 16 35 H 0.15 -2.14 8.14 -2.39 -0.02 -2.16 16 36 H 0.42 -8.02 8.73 -92.70 -0.81 -8.83 16 37 H 0.04 0.04 8.14 -2.39 -0.02 0.02 16 38 H 0.12 -1.47 7.90 -2.39 -0.02 -1.48 16 39 H 0.15 -2.79 7.79 -2.38 -0.02 -2.81 16 40 H 0.10 -1.13 8.14 -2.39 -0.02 -1.15 16 41 H 0.26 -3.46 8.06 -2.91 -0.02 -3.49 16 42 H 0.23 0.03 8.06 -2.91 -0.02 0.01 16 43 H 0.13 -2.47 8.08 -2.39 -0.02 -2.48 16 44 H 0.08 -0.73 8.14 -2.38 -0.02 -0.75 16 45 H 0.13 -0.07 8.06 -2.91 -0.02 -0.10 16 46 H 0.15 -0.07 8.06 -2.91 -0.02 -0.10 16 47 H 0.14 0.36 8.06 -2.91 -0.02 0.33 16 48 H 0.12 1.03 8.06 -2.91 -0.02 1.01 16 Total: 0.00 -41.13 409.77 0.86 -40.27 By element: Atomic # 1 Polarization: -25.07 SS G_CDS: -0.42 Total: -25.49 kcal Atomic # 6 Polarization: -5.44 SS G_CDS: 9.01 Total: 3.57 kcal Atomic # 7 Polarization: 1.76 SS G_CDS: -7.88 Total: -6.12 kcal Atomic # 8 Polarization: -11.38 SS G_CDS: -1.97 Total: -13.35 kcal Atomic # 14 Polarization: -1.00 SS G_CDS: 2.11 Total: 1.12 kcal Total: -41.13 0.86 -40.27 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14644236_9818708.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 167.914 kcal (2) G-P(sol) polarization free energy of solvation -41.126 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 126.788 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.856 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.270 kcal (6) G-S(sol) free energy of system = (1) + (5) 127.644 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.36 seconds